Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_F19
(864 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z94801-1|CAB08162.2| 1376|Homo sapiens Menkes Disease (ATP7A) pr... 32 2.3
X82336-1|CAB94714.1| 1500|Homo sapiens Menkes disease protein. 32 2.3
U27381-1|AAA96010.1| 1447|Homo sapiens protein ( Human Menkes di... 32 2.3
L06133-1|AAA35580.1| 1500|Homo sapiens Cu++-transporting P-type ... 32 2.3
BC114928-1|AAI14929.1| 562|Homo sapiens TMPRSS13 protein protein. 32 2.3
AY190317-1|AAO38062.1| 558|Homo sapiens transmembrane protease ... 32 2.3
AL645821-1|CAI42806.1| 1500|Homo sapiens ATPase, Cu++ transporti... 32 2.3
AB048796-1|BAB39741.2| 581|Homo sapiens membrane-type mosaic se... 32 2.3
AK027798-1|BAB55376.1| 491|Homo sapiens protein ( Homo sapiens ... 31 4.1
AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens ... 31 7.2
AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activat... 31 7.2
>Z94801-1|CAB08162.2| 1376|Homo sapiens Menkes Disease (ATP7A)
protein.
Length = 1376
Score = 32.3 bits (70), Expect = 2.3
Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Frame = +3
Query: 270 VLSAIGSADFNDRHKLSAASAGLALDNVNGH--GLSLTGTRIPGFGEQLGVAGKVNLFHN 443
+L+ +G+A+ N H L A ++ G + +PG G V L H
Sbjct: 1073 ILAIVGTAESNSEHPLGTAITKYCKQELDTETLGTCIDFQVVPGCGISCKVTNIEGLLHK 1132
Query: 444 NNHDLSAKGVRDQELAQ 494
NN ++ +++ L Q
Sbjct: 1133 NNWNIEDNNIKNASLVQ 1149
>X82336-1|CAB94714.1| 1500|Homo sapiens Menkes disease protein.
Length = 1500
Score = 32.3 bits (70), Expect = 2.3
Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Frame = +3
Query: 270 VLSAIGSADFNDRHKLSAASAGLALDNVNGH--GLSLTGTRIPGFGEQLGVAGKVNLFHN 443
+L+ +G+A+ N H L A ++ G + +PG G V L H
Sbjct: 1073 ILAIVGTAESNSEHPLGTAITKYCKQELDTETLGTCIDFQVVPGCGISCKVTNIEGLLHK 1132
Query: 444 NNHDLSAKGVRDQELAQ 494
NN ++ +++ L Q
Sbjct: 1133 NNWNIEDNNIKNASLVQ 1149
>U27381-1|AAA96010.1| 1447|Homo sapiens protein ( Human Menkes disease
gene (ATP7A), partial exon 23, partial cds. ).
Length = 1447
Score = 32.3 bits (70), Expect = 2.3
Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Frame = +3
Query: 270 VLSAIGSADFNDRHKLSAASAGLALDNVNGH--GLSLTGTRIPGFGEQLGVAGKVNLFHN 443
+L+ +G+A+ N H L A ++ G + +PG G V L H
Sbjct: 1073 ILAIVGTAESNSEHPLGTAITKYCKQELDTETLGTCIDFQVVPGCGISCKVTNIEGLLHK 1132
Query: 444 NNHDLSAKGVRDQELAQ 494
NN ++ +++ L Q
Sbjct: 1133 NNWNIEDNNIKNASLVQ 1149
>L06133-1|AAA35580.1| 1500|Homo sapiens Cu++-transporting P-type
ATPase protein.
Length = 1500
Score = 32.3 bits (70), Expect = 2.3
Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Frame = +3
Query: 270 VLSAIGSADFNDRHKLSAASAGLALDNVNGH--GLSLTGTRIPGFGEQLGVAGKVNLFHN 443
+L+ +G+A+ N H L A ++ G + +PG G V L H
Sbjct: 1073 ILAIVGTAESNSEHPLGTAITKYCKQELDTETLGTCIDFQVVPGCGISCKVTNIEGLLHK 1132
Query: 444 NNHDLSAKGVRDQELAQ 494
NN ++ +++ L Q
Sbjct: 1133 NNWNIEDNNIKNASLVQ 1149
>BC114928-1|AAI14929.1| 562|Homo sapiens TMPRSS13 protein protein.
Length = 562
Score = 32.3 bits (70), Expect = 2.3
Identities = 23/57 (40%), Positives = 32/57 (56%)
Frame = -3
Query: 418 ATPSCSPKPGMRVPVRLSPCPFTLSRASPAEAALSLWRSLKSADPMALSTFLSLPVR 248
A+P+ +P PG P R SP + +RASPA A+LS S +S+ + S S P R
Sbjct: 59 ASPAGTP-PGRASPGRASPAQASPARASPALASLSRSSSGRSSSARSASVTTS-PTR 113
>AY190317-1|AAO38062.1| 558|Homo sapiens transmembrane protease
serine 6 protein.
Length = 558
Score = 32.3 bits (70), Expect = 2.3
Identities = 23/57 (40%), Positives = 32/57 (56%)
Frame = -3
Query: 418 ATPSCSPKPGMRVPVRLSPCPFTLSRASPAEAALSLWRSLKSADPMALSTFLSLPVR 248
A+P+ +P PG P R SP + +RASPA A+LS S +S+ + S S P R
Sbjct: 59 ASPAGTP-PGRASPGRASPAQASPARASPALASLSRSSSGRSSSARSASVTTS-PTR 113
>AL645821-1|CAI42806.1| 1500|Homo sapiens ATPase, Cu++ transporting,
alpha polypeptide (Menkes syndrome) protein.
Length = 1500
Score = 32.3 bits (70), Expect = 2.3
Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Frame = +3
Query: 270 VLSAIGSADFNDRHKLSAASAGLALDNVNGH--GLSLTGTRIPGFGEQLGVAGKVNLFHN 443
+L+ +G+A+ N H L A ++ G + +PG G V L H
Sbjct: 1073 ILAIVGTAESNSEHPLGTAITKYCKQELDTETLGTCIDFQVVPGCGISCKVTNIEGLLHK 1132
Query: 444 NNHDLSAKGVRDQELAQ 494
NN ++ +++ L Q
Sbjct: 1133 NNWNIEDNNIKNASLVQ 1149
>AB048796-1|BAB39741.2| 581|Homo sapiens membrane-type mosaic
serine protease protein.
Length = 581
Score = 32.3 bits (70), Expect = 2.3
Identities = 23/57 (40%), Positives = 32/57 (56%)
Frame = -3
Query: 418 ATPSCSPKPGMRVPVRLSPCPFTLSRASPAEAALSLWRSLKSADPMALSTFLSLPVR 248
A+P+ +P PG P R SP + +RASPA A+LS S +S+ + S S P R
Sbjct: 59 ASPAGTP-PGRASPGRASPAQASPARASPALASLSRSSSGRSSSARSASVTTS-PTR 113
>AK027798-1|BAB55376.1| 491|Homo sapiens protein ( Homo sapiens
cDNA FLJ14892 fis, clone PLACE1004270, weakly similar to
TRANSMEMBRANE PROTEASE, SERINE 2 (EC 3.4.21.-). ).
Length = 491
Score = 31.5 bits (68), Expect = 4.1
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = -3
Query: 415 TPSCSPKPGMRVPVRLSPCPFTLSRASPAEAALSLWRSLKSADPMALSTFLSLPVR 248
TP PG P + SP + +RASPA A+LS S +S+ + S S P R
Sbjct: 64 TPPGRASPGRASPAQASPAQASPARASPALASLSRSSSGRSSSARSASVTTS-PTR 118
>AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens cDNA
FLJ46149 fis, clone TESTI4000621, moderately similar to
Homo sapiens Snf2-related CBP activator protein (SRCAP).
).
Length = 2427
Score = 30.7 bits (66), Expect = 7.2
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = -3
Query: 469 PLALRSWLLLWNKLTLPATPSCSPKPGMRVPVRLSPCP 356
P L S L + + + P TP+ S KP PVRLSP P
Sbjct: 1083 PQVLPSPLGVLSGTSRPPTPTLSLKPTPPAPVRLSPAP 1120
>AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activator
SRCAP protein.
Length = 2971
Score = 30.7 bits (66), Expect = 7.2
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = -3
Query: 469 PLALRSWLLLWNKLTLPATPSCSPKPGMRVPVRLSPCP 356
P L S L + + + P TP+ S KP PVRLSP P
Sbjct: 886 PQVLPSPLGVLSGTSRPPTPTLSLKPTPPAPVRLSPAP 923
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,183,379
Number of Sequences: 237096
Number of extensions: 1900143
Number of successful extensions: 16704
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 16298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16685
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11039988564
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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