Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_F18
         (888 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000262-5|AAN60522.1|  100|Caenorhabditis elegans Hypothetical ...    53   2e-07
DQ231945-1|ABB69435.1|   51|Caenorhabditis elegans hypothetical ...    28   7.8  

>AF000262-5|AAN60522.1|  100|Caenorhabditis elegans Hypothetical
           protein C48E7.11 protein.
          Length = 100

 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 24/59 (40%), Positives = 37/59 (62%)
 Frame = +3

Query: 378 QAVXKSRFKSKXRTQETFSRVXKLKAENQVLEEXVKTLSKQLQFLKDLFFAQAKKDXTE 554
           +AV ++R K +    +T  +V +LK EN+ LE  V+ L K+L FLK++F A AK D  +
Sbjct: 29  EAVNRTRQKKRQEENDTAEKVDELKKENETLERKVEQLQKELSFLKEMFMAYAKNDGND 87


>DQ231945-1|ABB69435.1|   51|Caenorhabditis elegans hypothetical
           protein protein.
          Length = 51

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +3

Query: 432 SRVXKLKAENQVLEEXVKTLSKQLQFLKDLFFAQAKKD 545
           S +   + E+ ++    K ++KQL FL+DL   Q+ +D
Sbjct: 14  SNIIDHETESDLIRPLAKDVTKQLDFLRDLLKXQSLRD 51


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,526,522
Number of Sequences: 27780
Number of extensions: 137832
Number of successful extensions: 353
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 353
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)