Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_F16
(1016 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46389-1|CAA86523.1| 380|Homo sapiens vasodilator-stimulated ph... 32 3.8
X98534-1|CAA67147.2| 378|Homo sapiens vasodilator-stimulated ph... 32 3.8
BC038224-1|AAH38224.1| 380|Homo sapiens vasodilator-stimulated ... 32 3.8
BC026019-1|AAH26019.1| 380|Homo sapiens vasodilator-stimulated ... 32 3.8
M63597-1|AAA58468.1| 599|Homo sapiens fibril-associated collage... 31 8.9
L12347-1|AAA36358.1| 718|Homo sapiens collagen protein. 31 8.9
D38163-1|BAA07368.1| 1142|Homo sapiens a1(XIX) collagen chain pr... 31 8.9
BC113364-1|AAI13365.1| 1142|Homo sapiens collagen, type XIX, alp... 31 8.9
BC113362-1|AAI13363.1| 1142|Homo sapiens collagen, type XIX, alp... 31 8.9
AL359539-1|CAI16492.1| 1142|Homo sapiens collagen type XIX alpha... 31 8.9
AL160262-5|CAI42322.1| 1142|Homo sapiens collagen type XIX alpha... 31 8.9
AL136445-2|CAI42716.1| 1142|Homo sapiens collagen type XIX alpha... 31 8.9
AL133388-3|CAI42497.1| 1142|Homo sapiens collagen type XIX alpha... 31 8.9
AL118519-1|CAB99331.2| 1142|Homo sapiens collagen type XIX alpha... 31 8.9
AB004629-1|BAA23309.1| 1143|Homo sapiens Type XIX collagen a1 ch... 31 8.9
>Z46389-1|CAA86523.1| 380|Homo sapiens vasodilator-stimulated
phosphoprotein (VASP) protein.
Length = 380
Score = 31.9 bits (69), Expect = 3.8
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -3
Query: 360 GGXXXPPXXXPXXRXGXXXPPGXPPPAXXXXXGV 259
GG PP P G PPG PPP GV
Sbjct: 160 GGPPAPPAGGPPPPPGPPPPPGPPPPPGLPPSGV 193
>X98534-1|CAA67147.2| 378|Homo sapiens vasodilator-stimulated
phosphoprotein protein.
Length = 378
Score = 31.9 bits (69), Expect = 3.8
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -3
Query: 360 GGXXXPPXXXPXXRXGXXXPPGXPPPAXXXXXGV 259
GG PP P G PPG PPP GV
Sbjct: 158 GGPPAPPAGGPPPPPGPPPPPGPPPPPGLPPSGV 191
>BC038224-1|AAH38224.1| 380|Homo sapiens vasodilator-stimulated
phosphoprotein protein.
Length = 380
Score = 31.9 bits (69), Expect = 3.8
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -3
Query: 360 GGXXXPPXXXPXXRXGXXXPPGXPPPAXXXXXGV 259
GG PP P G PPG PPP GV
Sbjct: 160 GGPPAPPAGGPPPPPGPPPPPGPPPPPGLPPSGV 193
>BC026019-1|AAH26019.1| 380|Homo sapiens vasodilator-stimulated
phosphoprotein protein.
Length = 380
Score = 31.9 bits (69), Expect = 3.8
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -3
Query: 360 GGXXXPPXXXPXXRXGXXXPPGXPPPAXXXXXGV 259
GG PP P G PPG PPP GV
Sbjct: 161 GGPPAPPAGGPPPPPGPPPPPGPPPPPGLPPSGV 194
>M63597-1|AAA58468.1| 599|Homo sapiens fibril-associated collagen
protein.
Length = 599
Score = 30.7 bits (66), Expect = 8.9
Identities = 20/59 (33%), Positives = 22/59 (37%)
Frame = +1
Query: 232 KKXDXPPXAXPXXXXXXGXGXPRGXXXXPPGXGXXXGXXXXTPPPXXXXPPXGGGXGPP 408
+K D P P G P+G PPG G T PP PP G GPP
Sbjct: 352 EKGDTGPPGPPALPGSLGIQGPQG----PPGKEGQRGRRGKTGPPGKPGPP--GPPGPP 404
>L12347-1|AAA36358.1| 718|Homo sapiens collagen protein.
Length = 718
Score = 30.7 bits (66), Expect = 8.9
Identities = 20/59 (33%), Positives = 22/59 (37%)
Frame = +1
Query: 232 KKXDXPPXAXPXXXXXXGXGXPRGXXXXPPGXGXXXGXXXXTPPPXXXXPPXGGGXGPP 408
+K D P P G P+G PPG G T PP PP G GPP
Sbjct: 272 EKGDTGPPGPPALPGSLGIQGPQG----PPGKEGQRGRRGKTGPPGKPGPP--GPPGPP 324
>D38163-1|BAA07368.1| 1142|Homo sapiens a1(XIX) collagen chain
precursor protein.
Length = 1142
Score = 30.7 bits (66), Expect = 8.9
Identities = 20/59 (33%), Positives = 22/59 (37%)
Frame = +1
Query: 232 KKXDXPPXAXPXXXXXXGXGXPRGXXXXPPGXGXXXGXXXXTPPPXXXXPPXGGGXGPP 408
+K D P P G P+G PPG G T PP PP G GPP
Sbjct: 377 EKGDTGPPGPPALPGSLGIQGPQG----PPGKEGQRGRRGKTGPPGKPGPP--GPPGPP 429
>BC113364-1|AAI13365.1| 1142|Homo sapiens collagen, type XIX, alpha
1 protein.
Length = 1142
Score = 30.7 bits (66), Expect = 8.9
Identities = 20/59 (33%), Positives = 22/59 (37%)
Frame = +1
Query: 232 KKXDXPPXAXPXXXXXXGXGXPRGXXXXPPGXGXXXGXXXXTPPPXXXXPPXGGGXGPP 408
+K D P P G P+G PPG G T PP PP G GPP
Sbjct: 377 EKGDTGPPGPPALPGSLGIQGPQG----PPGKEGQRGRRGKTGPPGKPGPP--GPPGPP 429
>BC113362-1|AAI13363.1| 1142|Homo sapiens collagen, type XIX, alpha
1 protein.
Length = 1142
Score = 30.7 bits (66), Expect = 8.9
Identities = 20/59 (33%), Positives = 22/59 (37%)
Frame = +1
Query: 232 KKXDXPPXAXPXXXXXXGXGXPRGXXXXPPGXGXXXGXXXXTPPPXXXXPPXGGGXGPP 408
+K D P P G P+G PPG G T PP PP G GPP
Sbjct: 377 EKGDTGPPGPPALPGSLGIQGPQG----PPGKEGQRGRRGKTGPPGKPGPP--GPPGPP 429
>AL359539-1|CAI16492.1| 1142|Homo sapiens collagen type XIX alpha 1
protein.
Length = 1142
Score = 30.7 bits (66), Expect = 8.9
Identities = 20/59 (33%), Positives = 22/59 (37%)
Frame = +1
Query: 232 KKXDXPPXAXPXXXXXXGXGXPRGXXXXPPGXGXXXGXXXXTPPPXXXXPPXGGGXGPP 408
+K D P P G P+G PPG G T PP PP G GPP
Sbjct: 377 EKGDTGPPGPPALPGSLGIQGPQG----PPGKEGQRGRRGKTGPPGKPGPP--GPPGPP 429
>AL160262-5|CAI42322.1| 1142|Homo sapiens collagen type XIX alpha 1
protein.
Length = 1142
Score = 30.7 bits (66), Expect = 8.9
Identities = 20/59 (33%), Positives = 22/59 (37%)
Frame = +1
Query: 232 KKXDXPPXAXPXXXXXXGXGXPRGXXXXPPGXGXXXGXXXXTPPPXXXXPPXGGGXGPP 408
+K D P P G P+G PPG G T PP PP G GPP
Sbjct: 377 EKGDTGPPGPPALPGSLGIQGPQG----PPGKEGQRGRRGKTGPPGKPGPP--GPPGPP 429
>AL136445-2|CAI42716.1| 1142|Homo sapiens collagen type XIX alpha 1
protein.
Length = 1142
Score = 30.7 bits (66), Expect = 8.9
Identities = 20/59 (33%), Positives = 22/59 (37%)
Frame = +1
Query: 232 KKXDXPPXAXPXXXXXXGXGXPRGXXXXPPGXGXXXGXXXXTPPPXXXXPPXGGGXGPP 408
+K D P P G P+G PPG G T PP PP G GPP
Sbjct: 377 EKGDTGPPGPPALPGSLGIQGPQG----PPGKEGQRGRRGKTGPPGKPGPP--GPPGPP 429
>AL133388-3|CAI42497.1| 1142|Homo sapiens collagen type XIX alpha 1
protein.
Length = 1142
Score = 30.7 bits (66), Expect = 8.9
Identities = 20/59 (33%), Positives = 22/59 (37%)
Frame = +1
Query: 232 KKXDXPPXAXPXXXXXXGXGXPRGXXXXPPGXGXXXGXXXXTPPPXXXXPPXGGGXGPP 408
+K D P P G P+G PPG G T PP PP G GPP
Sbjct: 377 EKGDTGPPGPPALPGSLGIQGPQG----PPGKEGQRGRRGKTGPPGKPGPP--GPPGPP 429
>AL118519-1|CAB99331.2| 1142|Homo sapiens collagen type XIX alpha 1
protein.
Length = 1142
Score = 30.7 bits (66), Expect = 8.9
Identities = 20/59 (33%), Positives = 22/59 (37%)
Frame = +1
Query: 232 KKXDXPPXAXPXXXXXXGXGXPRGXXXXPPGXGXXXGXXXXTPPPXXXXPPXGGGXGPP 408
+K D P P G P+G PPG G T PP PP G GPP
Sbjct: 377 EKGDTGPPGPPALPGSLGIQGPQG----PPGKEGQRGRRGKTGPPGKPGPP--GPPGPP 429
>AB004629-1|BAA23309.1| 1143|Homo sapiens Type XIX collagen a1 chain
protein.
Length = 1143
Score = 30.7 bits (66), Expect = 8.9
Identities = 20/59 (33%), Positives = 22/59 (37%)
Frame = +1
Query: 232 KKXDXPPXAXPXXXXXXGXGXPRGXXXXPPGXGXXXGXXXXTPPPXXXXPPXGGGXGPP 408
+K D P P G P+G PPG G T PP PP G GPP
Sbjct: 378 EKGDTGPPGPPALPGSLGIQGPQG----PPGKEGQRGRRGKTGPPGKPGPP--GPPGPP 430
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.314 0.150 0.515
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,068,985
Number of Sequences: 237096
Number of extensions: 1176427
Number of successful extensions: 5061
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4558
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 13654981522
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
- SilkBase 1999-2023 -