Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_F16
(1016 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.7
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.7
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.7
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 29 5.3
AL033514-8|CAA22097.2| 715|Caenorhabditis elegans Hypothetical ... 29 5.3
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 29 5.3
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 28 9.3
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 28 9.3
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 28 9.3
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.7 bits (66), Expect = 1.7
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = -1
Query: 407 GGPXPPPXGGXXXXGGGVXXXXPXXXPXPGGXXFXPRGXPXP 282
G P PPP GG GG P P PGG G P P
Sbjct: 725 GPPPPPPPGGLPPITGG-----PPPPPPPGGLPPISGGPPPP 761
Score = 29.5 bits (63), Expect = 4.0
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +1
Query: 301 GXXXXPPGXGXXXGXXXXTPPPXXXXPPXGGGXGPPQXP 417
G PPG G PPP PP GG PP P
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGL-PPITGGPPPPPPP 748
Score = 29.5 bits (63), Expect = 4.0
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 316 PPGXGXXXGXXXXTPPPXXXXPPXGGGXGPPQXP 417
PPG PPP PP GG PP P
Sbjct: 731 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 764
Score = 29.5 bits (63), Expect = 4.0
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = -1
Query: 407 GGPXPPPXGGXXXXGGGVXXXXPXXXPXPGGXXFXPRGXP 288
G P PPP GG GG P P PGG P P
Sbjct: 741 GPPPPPPPGGLPPISGG----PPPPPPPPGGCPPPPPPPP 776
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.7 bits (66), Expect = 1.7
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = -1
Query: 407 GGPXPPPXGGXXXXGGGVXXXXPXXXPXPGGXXFXPRGXPXP 282
G P PPP GG GG P P PGG G P P
Sbjct: 725 GPPPPPPPGGLPPITGG-----PPPPPPPGGLPPISGGPPPP 761
Score = 29.5 bits (63), Expect = 4.0
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +1
Query: 301 GXXXXPPGXGXXXGXXXXTPPPXXXXPPXGGGXGPPQXP 417
G PPG G PPP PP GG PP P
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGL-PPITGGPPPPPPP 748
Score = 29.5 bits (63), Expect = 4.0
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 316 PPGXGXXXGXXXXTPPPXXXXPPXGGGXGPPQXP 417
PPG PPP PP GG PP P
Sbjct: 731 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 764
Score = 29.5 bits (63), Expect = 4.0
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = -1
Query: 407 GGPXPPPXGGXXXXGGGVXXXXPXXXPXPGGXXFXPRGXP 288
G P PPP GG GG P P PGG P P
Sbjct: 741 GPPPPPPPGGLPPISGG----PPPPPPPPGGCPPPPPPPP 776
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.7 bits (66), Expect = 1.7
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = -1
Query: 407 GGPXPPPXGGXXXXGGGVXXXXPXXXPXPGGXXFXPRGXPXP 282
G P PPP GG GG P P PGG G P P
Sbjct: 308 GPPPPPPPGGLPPITGG-----PPPPPPPGGLPPISGGPPPP 344
Score = 29.5 bits (63), Expect = 4.0
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +1
Query: 301 GXXXXPPGXGXXXGXXXXTPPPXXXXPPXGGGXGPPQXP 417
G PPG G PPP PP GG PP P
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGGL-PPITGGPPPPPPP 331
Score = 29.5 bits (63), Expect = 4.0
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 316 PPGXGXXXGXXXXTPPPXXXXPPXGGGXGPPQXP 417
PPG PPP PP GG PP P
Sbjct: 314 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 347
Score = 29.5 bits (63), Expect = 4.0
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = -1
Query: 407 GGPXPPPXGGXXXXGGGVXXXXPXXXPXPGGXXFXPRGXP 288
G P PPP GG GG P P PGG P P
Sbjct: 324 GPPPPPPPGGLPPISGG----PPPPPPPPGGCPPPPPPPP 359
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 29.1 bits (62), Expect = 5.3
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +3
Query: 288 GGPPGGKXXPXGXXGGXXXGXPNPP 362
GGP GG P G GG G PP
Sbjct: 619 GGPGGGGGPPRGPGGGGGGGPTGPP 643
Score = 28.3 bits (60), Expect = 9.3
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Frame = -1
Query: 407 GGPXPPPXGGXXXXG-GGVXXXXPXXXPXPGGXXFXPRGXP 288
GGP P GG G GG P P P PRG P
Sbjct: 616 GGPGGPGGGGGPPRGPGGGGGGGPTGPPAPPKPPAKPRGRP 656
>AL033514-8|CAA22097.2| 715|Caenorhabditis elegans Hypothetical
protein Y75B8A.8 protein.
Length = 715
Score = 29.1 bits (62), Expect = 5.3
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -1
Query: 410 WGGPXPPPXGGXXXXGGGVXXXXPXXXPXPGG 315
+GGP P GG GGG P P P G
Sbjct: 4 FGGPGGPMYGGAGGGGGGPPRGPPQQPPQPQG 35
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 29.1 bits (62), Expect = 5.3
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +3
Query: 288 GGPPGGKXXPXGXXGGXXXGXPNPP 362
GGP GG P G GG G PP
Sbjct: 619 GGPGGGGGPPRGPGGGGGGGPTGPP 643
Score = 28.3 bits (60), Expect = 9.3
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Frame = -1
Query: 407 GGPXPPPXGGXXXXG-GGVXXXXPXXXPXPGGXXFXPRGXP 288
GGP P GG G GG P P P PRG P
Sbjct: 616 GGPGGPGGGGGPPRGPGGGGGGGPTGPPAPPKPPAKPRGRP 656
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 28.3 bits (60), Expect = 9.3
Identities = 13/41 (31%), Positives = 14/41 (34%)
Frame = +1
Query: 295 PRGXXXXPPGXGXXXGXXXXTPPPXXXXPPXGGGXGPPQXP 417
P+ PP G PP PP G G PP P
Sbjct: 212 PQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPP 252
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 28.3 bits (60), Expect = 9.3
Identities = 13/41 (31%), Positives = 14/41 (34%)
Frame = +1
Query: 295 PRGXXXXPPGXGXXXGXXXXTPPPXXXXPPXGGGXGPPQXP 417
P+ PP G PP PP G G PP P
Sbjct: 198 PQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPP 238
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 28.3 bits (60), Expect = 9.3
Identities = 13/41 (31%), Positives = 14/41 (34%)
Frame = +1
Query: 295 PRGXXXXPPGXGXXXGXXXXTPPPXXXXPPXGGGXGPPQXP 417
P+ PP G PP PP G G PP P
Sbjct: 198 PQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPP 238
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.314 0.150 0.515
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,033,049
Number of Sequences: 27780
Number of extensions: 138497
Number of successful extensions: 889
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 765
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2678332928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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