Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_F15
(855 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L11566-1|AAA16329.1| 188|Homo sapiens ribosomal protein L18 pro... 130 8e-30
DQ403032-1|ABD77165.1| 164|Homo sapiens ribosomal protein L18 p... 130 8e-30
BC021743-1|AAH21743.1| 188|Homo sapiens ribosomal protein L18 p... 130 8e-30
BC009708-1|AAH09708.1| 188|Homo sapiens ribosomal protein L18 p... 130 8e-30
BC000374-1|AAH00374.1| 188|Homo sapiens ribosomal protein L18 p... 130 8e-30
AB061825-1|BAB79463.1| 188|Homo sapiens ribosomal protein L18 p... 130 8e-30
AK128140-1|BAC87294.1| 280|Homo sapiens protein ( Homo sapiens ... 36 0.25
AK125824-1|BAC86307.1| 280|Homo sapiens protein ( Homo sapiens ... 36 0.25
>L11566-1|AAA16329.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 130 bits (313), Expect = 8e-30
Identities = 64/102 (62%), Positives = 77/102 (75%), Gaps = 2/102 (1%)
Frame = +2
Query: 317 AVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLV 496
AVVVGT+T+DVR+ ++PK+ V AL VT +AR+RIL AGG+ILTFDQLAL +P G TVL+
Sbjct: 80 AVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGCGTVLL 139
Query: 497 QGQRNAREAVRHFGPAPGAPXSHTKXYVRTKGH--EKARXXR 616
G R RE RHFG APG P SHTK YVR+KG E+AR R
Sbjct: 140 SGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFERARGRR 181
Score = 61.3 bits (142), Expect = 4e-09
Identities = 28/41 (68%), Positives = 33/41 (80%)
Frame = +1
Query: 184 AXRTNAKFNQXVLRRLFMSRINRPPISVSRLARHMKKPTRE 306
A RTN+ FNQ VL+RLFMSR NRPP+S+SR+ R MK P RE
Sbjct: 36 ARRTNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGRE 76
>DQ403032-1|ABD77165.1| 164|Homo sapiens ribosomal protein L18
protein.
Length = 164
Score = 130 bits (313), Expect = 8e-30
Identities = 64/102 (62%), Positives = 77/102 (75%), Gaps = 2/102 (1%)
Frame = +2
Query: 317 AVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLV 496
AVVVGT+T+DVR+ ++PK+ V AL VT +AR+RIL AGG+ILTFDQLAL +P G TVL+
Sbjct: 57 AVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGCGTVLL 116
Query: 497 QGQRNAREAVRHFGPAPGAPXSHTKXYVRTKGH--EKARXXR 616
G R RE RHFG APG P SHTK YVR+KG E+AR R
Sbjct: 117 SGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFERARGRR 158
Score = 61.3 bits (142), Expect = 4e-09
Identities = 28/41 (68%), Positives = 33/41 (80%)
Frame = +1
Query: 184 AXRTNAKFNQXVLRRLFMSRINRPPISVSRLARHMKKPTRE 306
A RTN+ FNQ VL+RLFMSR NRPP+S+SR+ R MK P RE
Sbjct: 13 ARRTNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGRE 53
>BC021743-1|AAH21743.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 130 bits (313), Expect = 8e-30
Identities = 64/102 (62%), Positives = 77/102 (75%), Gaps = 2/102 (1%)
Frame = +2
Query: 317 AVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLV 496
AVVVGT+T+DVR+ ++PK+ V AL VT +AR+RIL AGG+ILTFDQLAL +P G TVL+
Sbjct: 80 AVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGCGTVLL 139
Query: 497 QGQRNAREAVRHFGPAPGAPXSHTKXYVRTKGH--EKARXXR 616
G R RE RHFG APG P SHTK YVR+KG E+AR R
Sbjct: 140 SGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFERARGRR 181
Score = 59.3 bits (137), Expect = 2e-08
Identities = 27/41 (65%), Positives = 32/41 (78%)
Frame = +1
Query: 184 AXRTNAKFNQXVLRRLFMSRINRPPISVSRLARHMKKPTRE 306
A RTN+ FNQ VL+RLFMSR NRPP+ +SR+ R MK P RE
Sbjct: 36 ARRTNSTFNQVVLKRLFMSRTNRPPLCLSRMIRKMKLPGRE 76
>BC009708-1|AAH09708.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 130 bits (313), Expect = 8e-30
Identities = 64/102 (62%), Positives = 77/102 (75%), Gaps = 2/102 (1%)
Frame = +2
Query: 317 AVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLV 496
AVVVGT+T+DVR+ ++PK+ V AL VT +AR+RIL AGG+ILTFDQLAL +P G TVL+
Sbjct: 80 AVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGCGTVLL 139
Query: 497 QGQRNAREAVRHFGPAPGAPXSHTKXYVRTKGH--EKARXXR 616
G R RE RHFG APG P SHTK YVR+KG E+AR R
Sbjct: 140 SGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFERARGRR 181
Score = 61.3 bits (142), Expect = 4e-09
Identities = 28/41 (68%), Positives = 33/41 (80%)
Frame = +1
Query: 184 AXRTNAKFNQXVLRRLFMSRINRPPISVSRLARHMKKPTRE 306
A RTN+ FNQ VL+RLFMSR NRPP+S+SR+ R MK P RE
Sbjct: 36 ARRTNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGRE 76
>BC000374-1|AAH00374.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 130 bits (313), Expect = 8e-30
Identities = 64/102 (62%), Positives = 77/102 (75%), Gaps = 2/102 (1%)
Frame = +2
Query: 317 AVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLV 496
AVVVGT+T+DVR+ ++PK+ V AL VT +AR+RIL AGG+ILTFDQLAL +P G TVL+
Sbjct: 80 AVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGCGTVLL 139
Query: 497 QGQRNAREAVRHFGPAPGAPXSHTKXYVRTKGH--EKARXXR 616
G R RE RHFG APG P SHTK YVR+KG E+AR R
Sbjct: 140 SGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFERARGRR 181
Score = 61.3 bits (142), Expect = 4e-09
Identities = 28/41 (68%), Positives = 33/41 (80%)
Frame = +1
Query: 184 AXRTNAKFNQXVLRRLFMSRINRPPISVSRLARHMKKPTRE 306
A RTN+ FNQ VL+RLFMSR NRPP+S+SR+ R MK P RE
Sbjct: 36 ARRTNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGRE 76
>AB061825-1|BAB79463.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 130 bits (313), Expect = 8e-30
Identities = 64/102 (62%), Positives = 77/102 (75%), Gaps = 2/102 (1%)
Frame = +2
Query: 317 AVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLV 496
AVVVGT+T+DVR+ ++PK+ V AL VT +AR+RIL AGG+ILTFDQLAL +P G TVL+
Sbjct: 80 AVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGCGTVLL 139
Query: 497 QGQRNAREAVRHFGPAPGAPXSHTKXYVRTKGH--EKARXXR 616
G R RE RHFG APG P SHTK YVR+KG E+AR R
Sbjct: 140 SGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFERARGRR 181
Score = 61.3 bits (142), Expect = 4e-09
Identities = 28/41 (68%), Positives = 33/41 (80%)
Frame = +1
Query: 184 AXRTNAKFNQXVLRRLFMSRINRPPISVSRLARHMKKPTRE 306
A RTN+ FNQ VL+RLFMSR NRPP+S+SR+ R MK P RE
Sbjct: 36 ARRTNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGRE 76
>AK128140-1|BAC87294.1| 280|Homo sapiens protein ( Homo sapiens
cDNA FLJ46261 fis, clone TESTI4025062. ).
Length = 280
Score = 35.5 bits (78), Expect = 0.25
Identities = 30/102 (29%), Positives = 39/102 (38%), Gaps = 9/102 (8%)
Frame = +1
Query: 316 CRGSGDSHK*RETVQDTEDDGGCSSCYRKSSCTHFGCWRRNSYF-----*SAGSSCSDWQ 480
CR SG S R CS +S T CW + F S+G+S +
Sbjct: 30 CRSSGTSSTSRSWWSSGTSSTSCSWWSSGTSSTFCSCWSSGTSFTSCSCWSSGTSSTPCS 89
Query: 481 EDSTGTRSAKC----S*GSASLWXCSRSTXLSH*XLCSHQGT 594
S+GT S C S S++ W C S S +C GT
Sbjct: 90 CRSSGTSSTSCSCWSSGTSSTSWSCKSSGTSSTCYMCLSSGT 131
>AK125824-1|BAC86307.1| 280|Homo sapiens protein ( Homo sapiens
cDNA FLJ43836 fis, clone TESTI4005857. ).
Length = 280
Score = 35.5 bits (78), Expect = 0.25
Identities = 30/102 (29%), Positives = 39/102 (38%), Gaps = 9/102 (8%)
Frame = +1
Query: 316 CRGSGDSHK*RETVQDTEDDGGCSSCYRKSSCTHFGCWRRNSYF-----*SAGSSCSDWQ 480
CR SG S R CS +S T CW + F S+G+S +
Sbjct: 30 CRSSGTSSTSRSWWSSGTSSTSCSWWSSGTSSTFCSCWSSGTSFTSCSCWSSGTSSTPCS 89
Query: 481 EDSTGTRSAKC----S*GSASLWXCSRSTXLSH*XLCSHQGT 594
S+GT S C S S++ W C S S +C GT
Sbjct: 90 CRSSGTSSTSCSCWSSGTSSTSWSCKSSGTSSTCYMCLSSGT 131
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,368,052
Number of Sequences: 237096
Number of extensions: 1922283
Number of successful extensions: 4135
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4133
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10872716010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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