Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_F13
         (858 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23172-5|AAC46527.1|  510|Caenorhabditis elegans Hypothetical pr...   113   2e-25
U23172-4|AAL02494.1|  521|Caenorhabditis elegans Hypothetical pr...   113   2e-25
U23172-6|AAV58869.1|  484|Caenorhabditis elegans Hypothetical pr...   112   3e-25
AL023815-5|CAA19428.2|  366|Caenorhabditis elegans Hypothetical ...    31   1.4  
U39744-1|AAK18882.1|  471|Caenorhabditis elegans Hypothetical pr...    29   4.2  
AF003390-3|AAB54272.1| 1308|Caenorhabditis elegans Hypothetical ...    28   9.8  

>U23172-5|AAC46527.1|  510|Caenorhabditis elegans Hypothetical
           protein F25B5.6a protein.
          Length = 510

 Score =  113 bits (271), Expect = 2e-25
 Identities = 58/134 (43%), Positives = 81/134 (60%)
 Frame = +1

Query: 325 CRSYLLNRITVRMCSYYEDAVRKLNRLQSNKSTIEQIRKDIRTGQKCTNLEDMENYLSRT 504
           C +  L   + +    YE++VR LN LQSN +TI+++R   R   +  NL     YL   
Sbjct: 20  CGANQLRMSSEKAVPCYEESVRLLNGLQSNAATIKKLRVQ-RENLQAINLPQCRKYLESL 78

Query: 505 GVTMSKLDELSVVHVAGTKGKGSTSAMCESILRHHGFRTGFYSSPHLXAVRXRVRLXXRV 684
            ++   L+ L+++HV+GTKGKGS  A  ESILR  G RTGFYSSPHL  VR R+++  + 
Sbjct: 79  NISAEDLNALNIIHVSGTKGKGSACAFVESILRSQGLRTGFYSSPHLVHVRERIQVDGQP 138

Query: 685 ISEXMFAXYFHXVH 726
           +SE MFA  F  V+
Sbjct: 139 VSEQMFAEEFFHVY 152


>U23172-4|AAL02494.1|  521|Caenorhabditis elegans Hypothetical
           protein F25B5.6b protein.
          Length = 521

 Score =  113 bits (271), Expect = 2e-25
 Identities = 58/134 (43%), Positives = 81/134 (60%)
 Frame = +1

Query: 325 CRSYLLNRITVRMCSYYEDAVRKLNRLQSNKSTIEQIRKDIRTGQKCTNLEDMENYLSRT 504
           C +  L   + +    YE++VR LN LQSN +TI+++R   R   +  NL     YL   
Sbjct: 31  CGANQLRMSSEKAVPCYEESVRLLNGLQSNAATIKKLRVQ-RENLQAINLPQCRKYLESL 89

Query: 505 GVTMSKLDELSVVHVAGTKGKGSTSAMCESILRHHGFRTGFYSSPHLXAVRXRVRLXXRV 684
            ++   L+ L+++HV+GTKGKGS  A  ESILR  G RTGFYSSPHL  VR R+++  + 
Sbjct: 90  NISAEDLNALNIIHVSGTKGKGSACAFVESILRSQGLRTGFYSSPHLVHVRERIQVDGQP 149

Query: 685 ISEXMFAXYFHXVH 726
           +SE MFA  F  V+
Sbjct: 150 VSEQMFAEEFFHVY 163


>U23172-6|AAV58869.1|  484|Caenorhabditis elegans Hypothetical
           protein F25B5.6c protein.
          Length = 484

 Score =  112 bits (270), Expect = 3e-25
 Identities = 56/118 (47%), Positives = 76/118 (64%)
 Frame = +1

Query: 373 YEDAVRKLNRLQSNKSTIEQIRKDIRTGQKCTNLEDMENYLSRTGVTMSKLDELSVVHVA 552
           YE++VR LN LQSN +TI+++R   R   +  NL     YL    ++   L+ L+++HV+
Sbjct: 10  YEESVRLLNGLQSNAATIKKLRVQ-RENLQAINLPQCRKYLESLNISAEDLNALNIIHVS 68

Query: 553 GTKGKGSTSAMCESILRHHGFRTGFYSSPHLXAVRXRVRLXXRVISEXMFAXYFHXVH 726
           GTKGKGS  A  ESILR  G RTGFYSSPHL  VR R+++  + +SE MFA  F  V+
Sbjct: 69  GTKGKGSACAFVESILRSQGLRTGFYSSPHLVHVRERIQVDGQPVSEQMFAEEFFHVY 126


>AL023815-5|CAA19428.2|  366|Caenorhabditis elegans Hypothetical
           protein H28O16.2 protein.
          Length = 366

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 17/67 (25%), Positives = 30/67 (44%)
 Frame = +1

Query: 361 MCSYYEDAVRKLNRLQSNKSTIEQIRKDIRTGQKCTNLEDMENYLSRTGVTMSKLDELSV 540
           M    ++ + K+   Q  K TIE   ++    +K    ED+E     +G    K++E S 
Sbjct: 1   MADKLDEIIDKVASGQRKKDTIEDTEEEGTRKRKIEQFEDIERPNELSGFKKQKIEENSE 60

Query: 541 VHVAGTK 561
           +H   T+
Sbjct: 61  IHAEETE 67


>U39744-1|AAK18882.1|  471|Caenorhabditis elegans Hypothetical
           protein C03F11.1 protein.
          Length = 471

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
 Frame = +1

Query: 298 DRLMNSIGLCRSYLLNRITVRMCSYYEDA----VRKLNRLQSNKSTI 426
           D +++   LCRSYL  R  V     ++DA    +  LNR+Q N S +
Sbjct: 208 DVILSCFMLCRSYLFARFMVLHSKQFQDASTRTLAALNRIQVNFSFV 254


>AF003390-3|AAB54272.1| 1308|Caenorhabditis elegans Hypothetical
            protein R155.2 protein.
          Length = 1308

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -3

Query: 643  DAVTNRTLCGNRGDGVLIRTSHSL 572
            D +  RTLC   GDGV +  +H+L
Sbjct: 1104 DGIERRTLCITFGDGVQLTVTHNL 1127


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,405,189
Number of Sequences: 27780
Number of extensions: 268885
Number of successful extensions: 625
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 622
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)