Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_F09
         (871 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P13276 Cluster: Apolipophorin-3 precursor; n=11; Ditrys...    92   1e-17
UniRef50_Q0INN4 Cluster: Os12g0422700 protein; n=11; Oryza sativ...    38   0.44 
UniRef50_UPI0000D9BAA3 Cluster: PREDICTED: hypothetical protein;...    33   7.1  

>UniRef50_P13276 Cluster: Apolipophorin-3 precursor; n=11;
           Ditrysia|Rep: Apolipophorin-3 precursor - Manduca sexta
           (Tobacco hawkmoth) (Tobacco hornworm)
          Length = 189

 Score = 92.3 bits (219), Expect = 1e-17
 Identities = 67/180 (37%), Positives = 84/180 (46%), Gaps = 4/180 (2%)
 Frame = +2

Query: 131 MAAKFVV-LFACIALAQGAXVRRXAP---DFFKDIEHHTKEFHKXLXTTV*LAHQVKGRT 298
           MAAKFVV L AC+AL+  A VRR AP   + F+++E H KEF K            K   
Sbjct: 1   MAAKFVVVLAACVALSHSAMVRRDAPAGGNAFEEMEKHAKEFQKTFSEQFNSLVNSKNTQ 60

Query: 299 GLQXRLGRTAXXXXXXXXXXXXRVSXXALGDANGKAKGGFGTVEAEHRAHGRGAPQGXXX 478
                L   +             +   A+ DANGKAK                  +    
Sbjct: 61  DFNKALKDGSDSVLQQLSAFSSSLQG-AISDANGKAKEALEQARQNVEKTAEELRKAHPD 119

Query: 479 XXXXXXXXXXEKLQAAVQNTVQXSQKLAKKVSSNVQETNEXLAPKIXAXYDDFAXNTXXV 658
                     +KLQAAVQ TVQ SQKLAK+V+SN++ETN+ LAPKI   YDDF  +   V
Sbjct: 120 VEKEANAFK-DKLQAAVQTTVQESQKLAKEVASNMEETNKKLAPKIKQAYDDFVKHAEEV 178



 Score = 49.6 bits (113), Expect = 1e-04
 Identities = 30/71 (42%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
 Frame = +3

Query: 261 QQFNSLTKSKDAQDFXQGLEGRLRVRAATAQRLRQESPXXRSETRTA--RPREALEQSRQ 434
           +QFNSL  SK+ QDF + L+       +  Q+L   S   +     A  + +EALEQ+RQ
Sbjct: 48  EQFNSLVNSKNTQDFNKALKDG---SDSVLQQLSAFSSSLQGAISDANGKAKEALEQARQ 104

Query: 435 NIERTXEELRK 467
           N+E+T EELRK
Sbjct: 105 NVEKTAEELRK 115



 Score = 37.1 bits (82), Expect = 0.58
 Identities = 21/38 (55%), Positives = 26/38 (68%)
 Frame = +1

Query: 262 NSLTRSPSQRTHRTSXKAWKDGSESVLQQLNAFAKSLQ 375
           NSL  S + +      KA KDGS+SVLQQL+AF+ SLQ
Sbjct: 51  NSLVNSKNTQDFN---KALKDGSDSVLQQLSAFSSSLQ 85


>UniRef50_Q0INN4 Cluster: Os12g0422700 protein; n=11; Oryza
            sativa|Rep: Os12g0422700 protein - Oryza sativa subsp.
            japonica (Rice)
          Length = 1914

 Score = 37.5 bits (83), Expect = 0.44
 Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
 Frame = +3

Query: 318  EGRLRVRAATAQRLRQESPXXR-SETRTARPREALEQSRQNIERTXEELR 464
            EG+ + R A  QR+RQE+   R  E R A+ RE L++ +Q  ER  +E +
Sbjct: 995  EGQRKAREAEEQRVRQEAERRRLEEERQAQERERLQREQQERERAAKEAK 1044


>UniRef50_UPI0000D9BAA3 Cluster: PREDICTED: hypothetical protein;
           n=2; Catarrhini|Rep: PREDICTED: hypothetical protein -
           Macaca mulatta
          Length = 203

 Score = 33.5 bits (73), Expect = 7.1
 Identities = 19/48 (39%), Positives = 27/48 (56%)
 Frame = +3

Query: 270 NSLTKSKDAQDFXQGLEGRLRVRAATAQRLRQESPXXRSETRTARPRE 413
           +S T+    +   +G  G+   R   AQR R+ SP  RSETR +RP+E
Sbjct: 146 DSATQQLPLRPQPEGTCGQDAGRRRGAQRPRRASPSLRSETRASRPQE 193


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 433,164,420
Number of Sequences: 1657284
Number of extensions: 5826525
Number of successful extensions: 15788
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15782
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 77472727479
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)