Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_F09
         (871 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_03_0284 - 14595643-14595663,14595978-14596018,14596379-145967...    30   2.1  
01_03_0282 - 14580875-14580891,14582126-14585855                       29   6.4  

>01_03_0284 -
           14595643-14595663,14595978-14596018,14596379-14596732,
           14597023-14597494,14597524-14600001
          Length = 1121

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = +1

Query: 268 LTRSPSQRTHRTSXKAWKDGSESVLQQLNAFAKSLQXSARRRERQGQG 411
           +T +  Q +HR   KAW +  + V  + N      +  A RRE +  G
Sbjct: 53  ITDAEEQASHREGAKAWLEALKKVAYEANDIFDEFKYEALRREAKKNG 100


>01_03_0282 - 14580875-14580891,14582126-14585855
          Length = 1248

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = +1

Query: 268 LTRSPSQRTHRTSXKAWKDGSESVLQQLNAFAKSLQXSARRRERQGQG 411
           ++ +  Q +HR   KAW +  + V  + N      +  A RRE +  G
Sbjct: 53  ISDAEEQASHRQGVKAWLEALKKVAYEANDIFDEFKYEALRREAKKNG 100


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,406,700
Number of Sequences: 37544
Number of extensions: 178904
Number of successful extensions: 502
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 502
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)