Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_F07
         (859 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0292 + 22075647-22075691,22077394-22077507,22077602-220778...    30   2.7  
11_06_0201 + 21178784-21179047,21179519-21180064                       29   4.7  

>09_06_0292 +
           22075647-22075691,22077394-22077507,22077602-22077841,
           22077926-22078003,22078094-22078162,22078420-22078545,
           22079108-22079188,22079272-22079460,22079597-22080434,
           22082290-22082411,22082482-22082701,22082910-22083055,
           22083260-22083566,22083886-22084136,22084294-22084533,
           22084930-22085238
          Length = 1124

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 21/66 (31%), Positives = 31/66 (46%)
 Frame = +3

Query: 240 EEGRSSALWDRTTMDYSVKPVTTERFSMMTAVS*PARLTAPGXLGPGGDSTNYGGRLDWA 419
           E  R+S +WD+    Y   P  T     +  +  PAR T      P G+S+N+G  L  A
Sbjct: 505 ENRRASVVWDQEAGRYVSVPAQTRA---VPGLDLPAR-TPRFLANPTGESSNHGKNLAPA 560

Query: 420 NKNAQA 437
           N ++ A
Sbjct: 561 NASSSA 566


>11_06_0201 + 21178784-21179047,21179519-21180064
          Length = 269

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 23/65 (35%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
 Frame = +3

Query: 315 FSMMTAVS*PARLTAPGXLGPGGDSTNYGGRLDWANKNAQAAID--INRQIGGRSGMTAS 488
           F    AVS PA L A   LGPGG   +  G L  A   A A     + R   G  G    
Sbjct: 72  FPAAEAVSSPAELPATQLLGPGGGGVSPRGWLALARTRAPAIAGGFLARGAPGGRGGVVF 131

Query: 489 GSGVW 503
             G W
Sbjct: 132 PDGSW 136


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,233,740
Number of Sequences: 37544
Number of extensions: 310301
Number of successful extensions: 613
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 612
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)