Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_F05
(1253 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 33 0.42
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 33 0.56
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 31 1.3
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.3
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.3
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.3
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 31 1.7
Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical pr... 31 2.3
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 29 5.2
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 9.1
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical protein
Y49E10.10 protein.
Length = 425
Score = 33.1 bits (72), Expect = 0.42
Identities = 28/133 (21%), Positives = 40/133 (30%), Gaps = 1/133 (0%)
Frame = +1
Query: 853 PTAXPSXLHXPXSHHXSPNHLXXXRPXPPXXPXPXXSXXAPXPXXLRSPPXXSRXPSFXA 1032
PT + P + P P P P + P P PP +
Sbjct: 160 PTVKNTTAAEPTTEAPPPPTTKAPPPPTTKAPPPPTTKAPPPPTTKAPPPPTTNKEVTTV 219
Query: 1033 XXLPTRXXHSAPXXNLPSPXSXXS-XXPXXPSEPSPPX*TXXXPPXXPXPXXXXXXXXXX 1209
+P +AP N P+P + + P++ +PP T P P P
Sbjct: 220 APVPKPAPVTAPAPNPPAPENTTAKVETTKPTKAAPPAPT-PVPNPVPSPPPPPANTTVT 278
Query: 1210 XXXXDTPPXTXPP 1248
PP T P
Sbjct: 279 EEKTTVPPATDEP 291
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 32.7 bits (71), Expect = 0.56
Identities = 24/91 (26%), Positives = 31/91 (34%), Gaps = 7/91 (7%)
Frame = +1
Query: 928 PXPPXXPXPXXSXXAPXPXXLRSP----PXXSRXPS-FXAXXLPTRXXHSAPXXN--LPS 1086
P PP P P + AP P P P + P+ + +P AP +P+
Sbjct: 65 PAPPPAPYPQHAVPAPAPPLASYPQNAVPVPAPPPAPYPQHAVPAPAPPPAPYPQHAVPA 124
Query: 1087 PXSXXSXXPXXPSEPSPPX*TXXXPPXXPXP 1179
P P P P P PP P P
Sbjct: 125 PAPYQQQPPPPPPPPHYPPPPPHYPPPPPAP 155
Score = 30.3 bits (65), Expect = 3.0
Identities = 21/99 (21%), Positives = 27/99 (27%)
Frame = +2
Query: 857 PHXPXPSXXXXXXXXXXXISXXXXPXPRPPRXXPXPXQPPXXXPFARLPXXPVXRPSGPX 1036
P P P+ + P P P + P P PP P +P S P
Sbjct: 30 PPPPKPAPYVEQSAQPQQTAPPPPPAPYPQQAVPAPAPPPAPYPQHAVPAPAPPLASYPQ 89
Query: 1037 XSXPXXXXXXXXXXSQAPXPXXPXXRPXPQSXXRXXRPH 1153
+ P A P P PQ P+
Sbjct: 90 NAVPVPAPPPAPYPQHAVPAPAPPPAPYPQHAVPAPAPY 128
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 31.5 bits (68), Expect = 1.3
Identities = 16/54 (29%), Positives = 20/54 (37%)
Frame = +1
Query: 928 PXPPXXPXPXXSXXAPXPXXLRSPPXXSRXPSFXAXXLPTRXXHSAPXXNLPSP 1089
P PP P P P P PP S+ P+ +P +P LP P
Sbjct: 1339 PPPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPP 1392
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.5 bits (68), Expect = 1.3
Identities = 22/73 (30%), Positives = 26/73 (35%), Gaps = 2/73 (2%)
Frame = +1
Query: 928 PXPPXX--PXPXXSXXAPXPXXLRSPPXXSRXPSFXAXXLPTRXXHSAPXXNLPSPXSXX 1101
P PP P P + P P SPP P + P S P +LP P +
Sbjct: 264 PPPPRTGSPPPPPTGSPPPPPAGGSPPP----PRAGSPPPPPPPRGSPPTGSLPPPQAGG 319
Query: 1102 SXXPXXPSEPSPP 1140
S P P PP
Sbjct: 320 SPPPAGTGSPPPP 332
Score = 31.1 bits (67), Expect = 1.7
Identities = 23/79 (29%), Positives = 24/79 (30%)
Frame = +1
Query: 928 PXPPXXPXPXXSXXAPXPXXLRSPPXXSRXPSFXAXXLPTRXXHSAPXXNLPSPXSXXSX 1107
P PP P +P P P R S PT P P P S
Sbjct: 240 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGS--PPPPPTGSPPPPPAGGSPPPPRAGSP 297
Query: 1108 XPXXPSEPSPPX*TXXXPP 1164
P P SPP T PP
Sbjct: 298 PPPPPPRGSPP--TGSLPP 314
Score = 30.3 bits (65), Expect = 3.0
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Frame = +2
Query: 929 PXPRPPRXXPXPXQPPXXXPFARLPXXPVXRPSG--PXXSXP 1048
P RPPR P PP P + P RP+G P S P
Sbjct: 422 PTGRPPRGSPPTGSPPTGLPSRQKRQAPEDRPTGSPPTGSPP 463
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.5 bits (68), Expect = 1.3
Identities = 22/73 (30%), Positives = 26/73 (35%), Gaps = 2/73 (2%)
Frame = +1
Query: 928 PXPPXX--PXPXXSXXAPXPXXLRSPPXXSRXPSFXAXXLPTRXXHSAPXXNLPSPXSXX 1101
P PP P P + P P SPP P + P S P +LP P +
Sbjct: 285 PPPPRTGSPPPPPTGSPPPPPAGGSPPP----PRAGSPPPPPPPRGSPPTGSLPPPQAGG 340
Query: 1102 SXXPXXPSEPSPP 1140
S P P PP
Sbjct: 341 SPPPAGTGSPPPP 353
Score = 31.1 bits (67), Expect = 1.7
Identities = 23/79 (29%), Positives = 24/79 (30%)
Frame = +1
Query: 928 PXPPXXPXPXXSXXAPXPXXLRSPPXXSRXPSFXAXXLPTRXXHSAPXXNLPSPXSXXSX 1107
P PP P +P P P R S PT P P P S
Sbjct: 261 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGS--PPPPPTGSPPPPPAGGSPPPPRAGSP 318
Query: 1108 XPXXPSEPSPPX*TXXXPP 1164
P P SPP T PP
Sbjct: 319 PPPPPPRGSPP--TGSLPP 335
Score = 30.3 bits (65), Expect = 3.0
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Frame = +2
Query: 929 PXPRPPRXXPXPXQPPXXXPFARLPXXPVXRPSG--PXXSXP 1048
P RPPR P PP P + P RP+G P S P
Sbjct: 443 PTGRPPRGSPPTGSPPTGLPSRQKRQAPEDRPTGSPPTGSPP 484
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.5 bits (68), Expect = 1.3
Identities = 22/73 (30%), Positives = 26/73 (35%), Gaps = 2/73 (2%)
Frame = +1
Query: 928 PXPPXX--PXPXXSXXAPXPXXLRSPPXXSRXPSFXAXXLPTRXXHSAPXXNLPSPXSXX 1101
P PP P P + P P SPP P + P S P +LP P +
Sbjct: 270 PPPPRTGSPPPPPTGSPPPPPAGGSPPP----PRAGSPPPPPPPRGSPPTGSLPPPQAGG 325
Query: 1102 SXXPXXPSEPSPP 1140
S P P PP
Sbjct: 326 SPPPAGTGSPPPP 338
Score = 31.1 bits (67), Expect = 1.7
Identities = 23/79 (29%), Positives = 24/79 (30%)
Frame = +1
Query: 928 PXPPXXPXPXXSXXAPXPXXLRSPPXXSRXPSFXAXXLPTRXXHSAPXXNLPSPXSXXSX 1107
P PP P +P P P R S PT P P P S
Sbjct: 246 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGS--PPPPPTGSPPPPPAGGSPPPPRAGSP 303
Query: 1108 XPXXPSEPSPPX*TXXXPP 1164
P P SPP T PP
Sbjct: 304 PPPPPPRGSPP--TGSLPP 320
Score = 30.3 bits (65), Expect = 3.0
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Frame = +2
Query: 929 PXPRPPRXXPXPXQPPXXXPFARLPXXPVXRPSG--PXXSXP 1048
P RPPR P PP P + P RP+G P S P
Sbjct: 428 PTGRPPRGSPPTGSPPTGLPSRQKRQAPEDRPTGSPPTGSPP 469
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical protein
T28C6.1 protein.
Length = 281
Score = 31.1 bits (67), Expect = 1.7
Identities = 20/66 (30%), Positives = 24/66 (36%), Gaps = 3/66 (4%)
Frame = -3
Query: 1116 GRXXGXXGXGAWEXXXXXXXXXXGXEXXGPEGRXTGXXGRRA--KGXXXGGXXGXG-WXR 946
G G G G + G G +G G G + +G GG G G W
Sbjct: 192 GNQGGGGGRGGNQGGEQGGWGGQGGSQGGSQGGSQGGWGNQGGQQGGGRGGQQGPGGWGG 251
Query: 945 GGRGXG 928
GGRG G
Sbjct: 252 GGRGGG 257
Score = 29.9 bits (64), Expect = 4.0
Identities = 31/125 (24%), Positives = 38/125 (30%)
Frame = -1
Query: 1172 GXXGGXXXV*XGGXGSEGXXGXXEXXDXGLGRXXXGAECXXRVGRXXAXKDGXRXXXGGE 993
G GG GG G G + G + G + + G + G GG+
Sbjct: 177 GSQGGWGGQNGGGQGGNQGGGGGRGGNQGGEQGGWGGQGGSQGGSQGGSQGGW-GNQGGQ 235
Query: 992 RRXXGXGAXXXXXGXGXXGGXGRXXXRWLGDXWWXWGXWRXEGXAVGXDAWXXGXASWXV 813
+ G G G GG GR G W WG W G SW
Sbjct: 236 Q----GGGRGGQQGPGGWGGGGR------GGGWGGWGR---------GSRWGWGRPSWGG 276
Query: 812 XGRXW 798
GR W
Sbjct: 277 WGRGW 281
>Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical protein
C36H8.1 protein.
Length = 418
Score = 30.7 bits (66), Expect = 2.3
Identities = 21/72 (29%), Positives = 27/72 (37%)
Frame = +1
Query: 925 RPXPPXXPXPXXSXXAPXPXXLRSPPXXSRXPSFXAXXLPTRXXHSAPXXNLPSPXSXXS 1104
RP P P P AP P P + P +P AP P+P +
Sbjct: 181 RPPPQEPPKPVEQA-APPPPPAPMPVPVEKAPE----PVPAPVEQIAPP---PAPVQDPA 232
Query: 1105 XXPXXPSEPSPP 1140
P PS+P+PP
Sbjct: 233 PAPVEPSDPAPP 244
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical protein
C50F7.5 protein.
Length = 309
Score = 29.5 bits (63), Expect = 5.2
Identities = 29/135 (21%), Positives = 30/135 (22%)
Frame = +2
Query: 746 PXXXPHAPXXXSHPXXXSTXXPPPXSSPLHXXTRXXQPHXPXPSXXXXXXXXXXXISXXX 925
P P S P P P + QP P PS S
Sbjct: 135 PSVEPSEDHQPSGPPSPGPVDPSEDPQPSVEPSEDPQPSGP-PSPGPVDPSEDPQPSGSS 193
Query: 926 XPXPRPPRXXPXPXQPPXXXPFARLPXXPVXRPSGPXXSXPXXXXXXXXXXSQAPXPXXP 1105
P P P P P PP P P P P P P
Sbjct: 194 SPGPVDPSDEPSPSGPPSPGPVDPSEDPKPSEPPSPGPVDPSDEPSPSDPPGPPGPPGPP 253
Query: 1106 XXRPXPQSXXRXXRP 1150
RP RP
Sbjct: 254 TRRPPGPPGPPTRRP 268
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.5 bits (63), Expect = 5.2
Identities = 20/73 (27%), Positives = 22/73 (30%)
Frame = +3
Query: 660 HXXHXXXQPXXSPXSAXXPIXRRPPHEXTPXXXRTXXPXXATXPXPPRPXXHLPARXSXP 839
H H P P PP P RT P P P RP P+ P
Sbjct: 115 HGDHEASPPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRS---PPPRRPPMTPPSPQRRP 171
Query: 840 PRVXXNRTTLXPP 878
PR + PP
Sbjct: 172 PRTPPSPEPRNPP 184
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.7 bits (61), Expect = 9.1
Identities = 21/77 (27%), Positives = 21/77 (27%)
Frame = -3
Query: 987 GXXXGGXXGXGWXRGGRGXGXXXXEMXXXXXXXXXXVEG*GXCGWXXRVXXWXGELXGGG 808
G GG G G GG G G G G CG G GGG
Sbjct: 30 GGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGG 89
Query: 807 XXVEXXXGWLXXXGACG 757
G G CG
Sbjct: 90 GGCGGGGGGCGGGGGCG 106
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,522,757
Number of Sequences: 27780
Number of extensions: 149436
Number of successful extensions: 651
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 559
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3485108972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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