Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_F04
(896 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 0.85
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 0.85
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 0.85
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 1.5
Z83114-7|CAJ76943.1| 525|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z83114-6|CAB63235.1| 589|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 4.5
AL110487-11|CAC42369.1| 624|Caenorhabditis elegans Hypothetical... 29 4.5
AL110487-10|CAC42368.1| 623|Caenorhabditis elegans Hypothetical... 29 4.5
AL110487-9|CAB54435.1| 626|Caenorhabditis elegans Hypothetical ... 29 4.5
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 29 6.0
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 29 6.0
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 29 6.0
Z74031-17|CAN86923.1| 380|Caenorhabditis elegans Hypothetical p... 28 7.9
Z74031-16|CAA98452.1| 378|Caenorhabditis elegans Hypothetical p... 28 7.9
AF031837-1|AAC13673.1| 624|Caenorhabditis elegans GLY5c protein. 28 7.9
AF031836-1|AAC13672.1| 626|Caenorhabditis elegans GLY5b protein. 28 7.9
AF031835-1|AAC13671.1| 623|Caenorhabditis elegans GLY5a protein. 28 7.9
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.5 bits (68), Expect = 0.85
Identities = 17/50 (34%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
Frame = +3
Query: 750 PXXLVLSSGFSXXPDIXXXXPPXTX-PXSXPPPXSXPPLXXXPPSXXPTP 896
P L +G P PP T P PPP PP+ PP P P
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 765
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +3
Query: 789 PDIXXXXPPXTXPXSXPPPXSXPPLXXXPPSXXPTP 896
P I PP P PP PP PP P P
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.5 bits (68), Expect = 0.85
Identities = 17/50 (34%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
Frame = +3
Query: 750 PXXLVLSSGFSXXPDIXXXXPPXTX-PXSXPPPXSXPPLXXXPPSXXPTP 896
P L +G P PP T P PPP PP+ PP P P
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 765
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +3
Query: 789 PDIXXXXPPXTXPXSXPPPXSXPPLXXXPPSXXPTP 896
P I PP P PP PP PP P P
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.5 bits (68), Expect = 0.85
Identities = 17/50 (34%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
Frame = +3
Query: 750 PXXLVLSSGFSXXPDIXXXXPPXTX-PXSXPPPXSXPPLXXXPPSXXPTP 896
P L +G P PP T P PPP PP+ PP P P
Sbjct: 299 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 348
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +3
Query: 789 PDIXXXXPPXTXPXSXPPPXSXPPLXXXPPSXXPTP 896
P I PP P PP PP PP P P
Sbjct: 319 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 354
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +3
Query: 810 PPXTXPXSXPPPXSXPPLXXXPPSXXPTP 896
PP P PPP PP PP P P
Sbjct: 31 PPPPPPMCAPPPLPCPPPPICPPQFCPPP 59
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +1
Query: 769 PPAFPXXPISXXXXLPXPXXXPXPXLXPXPPSXXXPPXXXP 891
P P PI P P P P P PP PP P
Sbjct: 42 PLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMP 82
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = +1
Query: 769 PPAFPXXPISXXXXLPXPXXXPXPXLXPXPPSXXXPPXXXPP 894
PP P P + P P P + P PP PP PP
Sbjct: 40 PPPLPCPP----PPICPPQFCPPPPMCPPPPPPPPPPMCPPP 77
>Z83114-7|CAJ76943.1| 525|Caenorhabditis elegans Hypothetical
protein K09B11.5b protein.
Length = 525
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +3
Query: 810 PPXTXPXSXPPPXSXPPLXXXPPSXXPTP 896
PP + P PP S PP+ P S P P
Sbjct: 480 PPVSQPPVSQPPVSQPPVSQPPVSQPPVP 508
>Z83114-6|CAB63235.1| 589|Caenorhabditis elegans Hypothetical
protein K09B11.5a protein.
Length = 589
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +3
Query: 810 PPXTXPXSXPPPXSXPPLXXXPPSXXPTP 896
PP + P PP S PP+ P S P P
Sbjct: 544 PPVSQPPVSQPPVSQPPVSQPPVSQPPVP 572
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +3
Query: 810 PPXTXPXSXPPPXSXPPLXXXPPSXXP 890
PP T P PP + PP PP+ P
Sbjct: 382 PPTTEPPKIEPPRTEPPKTEPPPTEPP 408
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/63 (28%), Positives = 20/63 (31%)
Frame = +3
Query: 705 TLXKXRXXXPXXLCXPXXLVLSSGFSXXPDIXXXXPPXTXPXSXPPPXSXPPLXXXPPSX 884
T K P + P + S P PP P S PPP PP S
Sbjct: 461 TTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPALEQEISG 520
Query: 885 XPT 893
PT
Sbjct: 521 PPT 523
>AL110487-11|CAC42369.1| 624|Caenorhabditis elegans Hypothetical
protein Y39E4B.12c protein.
Length = 624
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +3
Query: 192 GFEENLMRNWVCLVEHESSRDTSKTNTNRNGSKDYGLFQINDRYWCSKGA-SPGKD 356
GF+ L NW + E + T + R+ + GLF I+ +Y+ G PG D
Sbjct: 319 GFDWGLQFNWHSIPERDRKNRTRPIDPVRSPTMAGGLFSIDKKYFEKLGTYDPGFD 374
>AL110487-10|CAC42368.1| 623|Caenorhabditis elegans Hypothetical
protein Y39E4B.12b protein.
Length = 623
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +3
Query: 192 GFEENLMRNWVCLVEHESSRDTSKTNTNRNGSKDYGLFQINDRYWCSKGA-SPGKD 356
GF+ L NW + E + T + R+ + GLF I+ +Y+ G PG D
Sbjct: 319 GFDWGLQFNWHSIPERDRKNRTRPIDPVRSPTMAGGLFSIDKKYFEKLGTYDPGFD 374
>AL110487-9|CAB54435.1| 626|Caenorhabditis elegans Hypothetical
protein Y39E4B.12a protein.
Length = 626
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +3
Query: 192 GFEENLMRNWVCLVEHESSRDTSKTNTNRNGSKDYGLFQINDRYWCSKGA-SPGKD 356
GF+ L NW + E + T + R+ + GLF I+ +Y+ G PG D
Sbjct: 319 GFDWGLQFNWHSIPERDRKNRTRPIDPVRSPTMAGGLFSIDKKYFEKLGTYDPGFD 374
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +1
Query: 769 PPAFPXXPISXXXXLPXPXXXPXPXLXPXPPSXXXPP 879
PP P PI+ P P P P P PP P
Sbjct: 132 PPQQPCEPITPPPCKPCPQGPPGPPGPPGPPGDSGEP 168
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +1
Query: 769 PPAFPXXPISXXXXLPXPXXXPXPXLXPXPPSXXXPP 879
PP P PI+ P P P P P PP P
Sbjct: 132 PPQQPCEPITPPPWKPCPQGPPGPPGPPGPPGDSGEP 168
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +1
Query: 769 PPAFPXXPISXXXXLPXPXXXPXPXLXPXPPSXXXPP 879
PP P PI+ P P P P P PP P
Sbjct: 132 PPQQPCEPITPPPCKPCPQGPPGPPGPPGPPGDSGEP 168
>Z74031-17|CAN86923.1| 380|Caenorhabditis elegans Hypothetical
protein F32D8.7b protein.
Length = 380
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +3
Query: 741 LCXPXXLVLSSGFSXXPDIXXXXPPXTXPXSXPPPXSXP 857
LC P + F P PP T P PPP P
Sbjct: 220 LCKPTPAPTLAPFRPRPTTRRLPPPTTPPPPPPPPAPSP 258
>Z74031-16|CAA98452.1| 378|Caenorhabditis elegans Hypothetical
protein F32D8.7a protein.
Length = 378
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +3
Query: 741 LCXPXXLVLSSGFSXXPDIXXXXPPXTXPXSXPPPXSXP 857
LC P + F P PP T P PPP P
Sbjct: 218 LCKPTPAPTLAPFRPRPTTRRLPPPTTPPPPPPPPAPSP 256
>AF031837-1|AAC13673.1| 624|Caenorhabditis elegans GLY5c protein.
Length = 624
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +3
Query: 192 GFEENLMRNWVCLVEHESSRDTSKTNTNRNGSKDYGLFQINDRYWCSKGA-SPGKD 356
GF+ L NW + E + T + R+ + GLF I+ Y+ G PG D
Sbjct: 319 GFDWGLQFNWHSIPERDRKNRTRPIDPVRSPTMAGGLFSIDKEYFEKLGTYDPGFD 374
>AF031836-1|AAC13672.1| 626|Caenorhabditis elegans GLY5b protein.
Length = 626
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +3
Query: 192 GFEENLMRNWVCLVEHESSRDTSKTNTNRNGSKDYGLFQINDRYWCSKGA-SPGKD 356
GF+ L NW + E + T + R+ + GLF I+ Y+ G PG D
Sbjct: 319 GFDWGLQFNWHSIPERDRKNRTRPIDPVRSPTMAGGLFSIDKEYFEKLGTYDPGFD 374
>AF031835-1|AAC13671.1| 623|Caenorhabditis elegans GLY5a protein.
Length = 623
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +3
Query: 192 GFEENLMRNWVCLVEHESSRDTSKTNTNRNGSKDYGLFQINDRYWCSKGA-SPGKD 356
GF+ L NW + E + T + R+ + GLF I+ Y+ G PG D
Sbjct: 319 GFDWGLQFNWHSIPERDRKNRTRPIDPVRSPTMAGGLFSIDKEYFEKLGTYDPGFD 374
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,664,642
Number of Sequences: 27780
Number of extensions: 304396
Number of successful extensions: 1543
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1356
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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