Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_F01
(964 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 34 0.026
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 0.98
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 28 1.7
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 28 2.3
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 27 3.0
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 5.2
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 34.3 bits (75), Expect = 0.026
Identities = 23/98 (23%), Positives = 23/98 (23%)
Frame = +2
Query: 662 PXXPXPXPXXPXXXXXXPXPPXXPPXPPXXXXXPPXXXXXPXXXXPXPXXXXXXXXPPXX 841
P P P P P PP P PP P P P
Sbjct: 1117 PSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSS 1176
Query: 842 XXPPXXPPXXXPXXPXXPXXPXXXXXXPXXXXPPXXPP 955
PP P P P P PP PP
Sbjct: 1177 GIPPVPKPAAG-VPPVPPPSEAPPVPKPSVGVPPVPPP 1213
Score = 32.3 bits (70), Expect = 0.10
Identities = 22/93 (23%), Positives = 22/93 (23%)
Frame = +2
Query: 677 PXPXXPXXXXXXPXPPXXPPXPPXXXXXPPXXXXXPXXXXPXPXXXXXXXXPPXXXXPPX 856
P P P P PP P PP P P P P
Sbjct: 1103 PVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVP 1162
Query: 857 XPPXXXPXXPXXPXXPXXXXXXPXXXXPPXXPP 955
P P P P P PP PP
Sbjct: 1163 KPSVAAPPVP-APSSGIPPVPKPAAGVPPVPPP 1194
Score = 31.9 bits (69), Expect = 0.14
Identities = 23/101 (22%), Positives = 23/101 (22%), Gaps = 3/101 (2%)
Frame = +2
Query: 662 PXXPXPXPXXPXXXXXXPXPPXXPPXPPXXXXXPPXXXXXPXXXXPXPXXXXXXXXPPXX 841
P P P P P P PP P P P P P
Sbjct: 1060 PSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSG 1119
Query: 842 XXPPXXPPXXXPXXP---XXPXXPXXXXXXPXXXXPPXXPP 955
P P P P P P P P PP
Sbjct: 1120 APPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPP 1160
Score = 29.9 bits (64), Expect = 0.56
Identities = 23/98 (23%), Positives = 23/98 (23%)
Frame = +2
Query: 662 PXXPXPXPXXPXXXXXXPXPPXXPPXPPXXXXXPPXXXXXPXXXXPXPXXXXXXXXPPXX 841
P P P P P PP P P P P PP
Sbjct: 1027 PSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPP-V 1085
Query: 842 XXPPXXPPXXXPXXPXXPXXPXXXXXXPXXXXPPXXPP 955
P PP P P P P P PP
Sbjct: 1086 PAPSGIPPVPKPSV-AAPPVPKPSVAVPPVPAPSGAPP 1122
Score = 29.1 bits (62), Expect = 0.98
Identities = 23/99 (23%), Positives = 23/99 (23%), Gaps = 1/99 (1%)
Frame = +2
Query: 662 PXXPXPXPXXPXXXXXXPXPPXX-PPXPPXXXXXPPXXXXXPXXXXPXPXXXXXXXXPPX 838
P P P P P PP P PP P P
Sbjct: 1145 PSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPS 1204
Query: 839 XXXPPXXPPXXXPXXPXXPXXPXXXXXXPXXXXPPXXPP 955
PP PP P P P P PP P
Sbjct: 1205 VGVPPVPPPSTAPPVP-TPSAGLPPVPVPTAKAPPVPAP 1242
Score = 28.3 bits (60), Expect = 1.7
Identities = 22/101 (21%), Positives = 22/101 (21%), Gaps = 3/101 (2%)
Frame = +2
Query: 662 PXXPXPXPXXPXXXXXXPXPPXXPPXPPXXXXXPPXXXXXPXXXXPXPXXXXXXXXPPXX 841
P P P P P PP P P P P P
Sbjct: 1041 PPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVA 1100
Query: 842 XXPPXXPPXXXPXXP---XXPXXPXXXXXXPXXXXPPXXPP 955
P P P P P P P P PP
Sbjct: 1101 APPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPP 1141
Score = 27.9 bits (59), Expect = 2.3
Identities = 22/103 (21%), Positives = 22/103 (21%)
Frame = +1
Query: 643 PXXXPXPXXPXXXXXPXXPXXXXPXXPXXPPPPPXXXXXPXPXXXXXXXXXPPPXXXXXX 822
P P P P P P P P P P PPP
Sbjct: 1141 PVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPP-SEAPP 1199
Query: 823 XXXPXXXXXPXXXPXPPXXXPXXXXPXPPXXPXXXXXXPXPXP 951
P P P P PP P P P
Sbjct: 1200 VPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 25.8 bits (54), Expect = 9.1
Identities = 23/99 (23%), Positives = 23/99 (23%), Gaps = 1/99 (1%)
Frame = +2
Query: 662 PXXPXPXPXXPXXXXXXPXPPXXPPXPPXXXXXPPXXXXXPXXXXPXPXXXXXXXX-PPX 838
P P P P PP P P P P P P P
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPPV--PIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAP 1079
Query: 839 XXXPPXXPPXXXPXXPXXPXXPXXXXXXPXXXXPPXXPP 955
PP P P P P P PP P
Sbjct: 1080 SGAPPVPAPSGIPPVPK-PSVAAPPVPKPSVAVPPVPAP 1117
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.1 bits (62), Expect = 0.98
Identities = 18/78 (23%), Positives = 18/78 (23%)
Frame = +2
Query: 662 PXXPXPXPXXPXXXXXXPXPPXXPPXPPXXXXXPPXXXXXPXXXXPXPXXXXXXXXPPXX 841
P P P P P PP P P P P PP
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSA 187
Query: 842 XXPPXXPPXXXPXXPXXP 895
P P P P P
Sbjct: 188 PSLPSAVPPMPPKVPPPP 205
Score = 26.2 bits (55), Expect = 6.9
Identities = 20/82 (24%), Positives = 20/82 (24%), Gaps = 4/82 (4%)
Frame = +2
Query: 671 PXPXPXXPXXXXXXPXPPXXPPXPPXXXXXPPXXXXXPXXXXPXPXXXXXXXXP--PXXX 844
P P P P PP P P P P P P P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKS 183
Query: 845 XP--PXXPPXXXPXXPXXPXXP 904
P P P P P P P
Sbjct: 184 PPSAPSLPSAVPPMPPKVPPPP 205
Score = 26.2 bits (55), Expect = 6.9
Identities = 19/81 (23%), Positives = 19/81 (23%), Gaps = 6/81 (7%)
Frame = +2
Query: 719 PPXXPPXPPXXXXXPPXXXXXPXXXXPXPXXXXXXXXP------PXXXXPPXXPPXXXPX 880
PP P P P P P P P P PP P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKS 183
Query: 881 XPXXPXXPXXXXXXPXXXXPP 943
P P P P PP
Sbjct: 184 PPSAPSLPSAVPPMPPKVPPP 204
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 28.3 bits (60), Expect = 1.7
Identities = 22/96 (22%), Positives = 22/96 (22%)
Frame = +2
Query: 671 PXPXPXXPXXXXXXPXPPXXPPXPPXXXXXPPXXXXXPXXXXPXPXXXXXXXXPPXXXXP 850
P P P P PP PP P P P P
Sbjct: 251 PAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKR 310
Query: 851 PXXPPXXXPXXPXXPXXPXXXXXXPXXXXPPXXPPP 958
P PP P P PP PPP
Sbjct: 311 PPPPP---PPSRRNRGKPPIGNGSSNSSLPPPPPPP 343
Score = 26.6 bits (56), Expect = 5.2
Identities = 17/70 (24%), Positives = 17/70 (24%), Gaps = 1/70 (1%)
Frame = +1
Query: 712 PXXPXXPPPPPXXXXXPXPXXXXXXXXXPPPXXXXXXXXXPXXXXXPXXXPXPPXXXPXX 891
P P PP P P PP P P P PP
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPP 477
Query: 892 XXPXP-PXXP 918
P P P P
Sbjct: 478 PAPAPAPAAP 487
Score = 26.2 bits (55), Expect = 6.9
Identities = 18/78 (23%), Positives = 18/78 (23%)
Frame = +3
Query: 723 PXXPPXPXXXXXPXPXXXXXPXXXXPXPXXXXXXXXPXXPXXPXXXPXXXXXXXPXXPPX 902
P PP P P P P P P P PP
Sbjct: 401 PALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSA-PIAPPL 459
Query: 903 PXXXPXXPXXPPXPXXXP 956
P P P PP P
Sbjct: 460 PAGMPAAPPLPPAAPAPP 477
Score = 25.8 bits (54), Expect = 9.1
Identities = 13/48 (27%), Positives = 13/48 (27%)
Frame = +2
Query: 662 PXXPXPXPXXPXXXXXXPXPPXXPPXPPXXXXXPPXXXXXPXXXXPXP 805
P P P P P P P P PP P P P
Sbjct: 437 PSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 27.9 bits (59), Expect = 2.3
Identities = 14/52 (26%), Positives = 14/52 (26%)
Frame = +1
Query: 730 PPPPPXXXXXPXPXXXXXXXXXPPPXXXXXXXXXPXXXXXPXXXPXPPXXXP 885
PPPPP P P P P P P PP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 27.9 bits (59), Expect = 2.3
Identities = 16/54 (29%), Positives = 16/54 (29%)
Frame = +1
Query: 796 PPPXXXXXXXXXPXXXXXPXXXPXPPXXXPXXXXPXPPXXPXXXXXXPXPXPXP 957
PPP P P P PP P PP P P P P P
Sbjct: 732 PPPPPPAVIVPTP----APAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 26.2 bits (55), Expect = 6.9
Identities = 12/40 (30%), Positives = 12/40 (30%)
Frame = +1
Query: 625 PXXXXXPXXXPXPXXPXXXXXPXXPXXXXPXXPXXPPPPP 744
P P P P P P P PPPPP
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 27.5 bits (58), Expect = 3.0
Identities = 25/83 (30%), Positives = 25/83 (30%), Gaps = 1/83 (1%)
Frame = -3
Query: 956 GXGXGXGXXXXXXGXXGGXGXXXX-GXXXGGXGXXXGXXXXXGXXXXXXXXXGGGXXXXX 780
G G G G G GG G G GG G G G GGG
Sbjct: 192 GFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGP---GGFEGGPGGFGGGPGGFG 248
Query: 779 XXXXGXGXXXXXGGGGGXXGXXG 711
G G G GGG G G
Sbjct: 249 GGLGGFGGGP-GGFGGGPGGHGG 270
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 26.6 bits (56), Expect = 5.2
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +3
Query: 885 PXXPPXPXXXPXXPXXPPXPXXXP 956
P PP P P P PP P P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPP 1728
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,106,533
Number of Sequences: 5004
Number of extensions: 14704
Number of successful extensions: 129
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 75
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 493304942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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