Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_F01
         (964 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   6.0  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    24   7.9  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.2 bits (50), Expect = 6.0
 Identities = 15/56 (26%), Positives = 15/56 (26%), Gaps = 2/56 (3%)
 Frame = +2

Query: 797 PXPXXXXXXXXPPXXXXPPXX--PPXXXPXXPXXPXXPXXXXXXPXXXXPPXXPPP 958
           P P        PP    PP         P  P     P      P    PP  PPP
Sbjct: 533 PPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPPAPPPP 588



 Score = 23.8 bits (49), Expect = 7.9
 Identities = 12/37 (32%), Positives = 12/37 (32%), Gaps = 1/37 (2%)
 Frame = +1

Query: 661 PXXPXXXXXPXX-PXXXXPXXPXXPPPPPXXXXXPXP 768
           P  P     P   P       P  PPPPP     P P
Sbjct: 561 PLNPAQLRFPAGFPNLPNAQPPPAPPPPPPMGPPPSP 597


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.8 bits (49), Expect = 7.9
 Identities = 16/54 (29%), Positives = 16/54 (29%)
 Frame = -3

Query: 872 GGXGXXXGXXXXXGXXXXXXXXXGGGXXXXXXXXXGXGXXXXXGGGGGXXGXXG 711
           GG G   G     G         GGG         G G      GGGG  G  G
Sbjct: 818 GGAGASGGGFLITGDPSDTIGAGGGGAGGPLRGSSG-GAGGGSSGGGGSGGTSG 870


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 303,667
Number of Sequences: 2352
Number of extensions: 4296
Number of successful extensions: 14
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 105843456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)