Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_E20
(892 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L19527-1|AAA19815.1| 136|Homo sapiens ribosomal protein L27 pro... 140 6e-33
L05094-1|AAC15857.1| 136|Homo sapiens ribosomal protein L27 pro... 140 6e-33
BC098560-1|AAH98560.1| 136|Homo sapiens ribosomal protein L27 p... 140 6e-33
BC021886-1|AAH21886.1| 140|Homo sapiens RPL27 protein protein. 140 6e-33
BC010026-1|AAH10026.1| 136|Homo sapiens ribosomal protein L27 p... 140 6e-33
BC007273-1|AAH07273.1| 136|Homo sapiens ribosomal protein L27 p... 140 6e-33
BC002588-1|AAH02588.1| 136|Homo sapiens ribosomal protein L27 p... 140 6e-33
BC001700-1|AAH01700.1| 136|Homo sapiens ribosomal protein L27 p... 140 6e-33
AB061851-1|BAB79492.1| 136|Homo sapiens ribosomal protein L27 p... 140 6e-33
U25752-1|AAA93226.1| 40|Homo sapiens ribosomal protein L27 pro... 56 2e-07
>L19527-1|AAA19815.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 140 bits (339), Expect = 6e-33
Identities = 67/101 (66%), Positives = 77/101 (76%), Gaps = 2/101 (1%)
Frame = +2
Query: 200 KPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFS 379
+PY HA VAGIDRYPRKV MGK KI KRSKIK FVKV NYNHLMPTRY+VD +K
Sbjct: 36 RPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTV 95
Query: 380 A-KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFXKLXF 496
KD+ +DPA ++K R +V+FEERYK+GKNKWFF KL F
Sbjct: 96 VNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
Score = 58.4 bits (135), Expect = 3e-08
Identities = 25/33 (75%), Positives = 30/33 (90%)
Frame = +1
Query: 97 GKXMXPGKVVLVLSGRYAGRKAIVVKNYDEGTS 195
GK M PGKVVLVL+GRY+GRKA++VKN D+GTS
Sbjct: 2 GKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTS 34
>L05094-1|AAC15857.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 140 bits (339), Expect = 6e-33
Identities = 67/101 (66%), Positives = 77/101 (76%), Gaps = 2/101 (1%)
Frame = +2
Query: 200 KPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFS 379
+PY HA VAGIDRYPRKV MGK KI KRSKIK FVKV NYNHLMPTRY+VD +K
Sbjct: 36 RPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTV 95
Query: 380 A-KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFXKLXF 496
KD+ +DPA ++K R +V+FEERYK+GKNKWFF KL F
Sbjct: 96 VNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
Score = 58.4 bits (135), Expect = 3e-08
Identities = 25/33 (75%), Positives = 30/33 (90%)
Frame = +1
Query: 97 GKXMXPGKVVLVLSGRYAGRKAIVVKNYDEGTS 195
GK M PGKVVLVL+GRY+GRKA++VKN D+GTS
Sbjct: 2 GKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTS 34
>BC098560-1|AAH98560.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 140 bits (339), Expect = 6e-33
Identities = 67/101 (66%), Positives = 77/101 (76%), Gaps = 2/101 (1%)
Frame = +2
Query: 200 KPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFS 379
+PY HA VAGIDRYPRKV MGK KI KRSKIK FVKV NYNHLMPTRY+VD +K
Sbjct: 36 RPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTV 95
Query: 380 A-KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFXKLXF 496
KD+ +DPA ++K R +V+FEERYK+GKNKWFF KL F
Sbjct: 96 VNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
Score = 58.4 bits (135), Expect = 3e-08
Identities = 25/33 (75%), Positives = 30/33 (90%)
Frame = +1
Query: 97 GKXMXPGKVVLVLSGRYAGRKAIVVKNYDEGTS 195
GK M PGKVVLVL+GRY+GRKA++VKN D+GTS
Sbjct: 2 GKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTS 34
>BC021886-1|AAH21886.1| 140|Homo sapiens RPL27 protein protein.
Length = 140
Score = 140 bits (339), Expect = 6e-33
Identities = 67/101 (66%), Positives = 77/101 (76%), Gaps = 2/101 (1%)
Frame = +2
Query: 200 KPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFS 379
+PY HA VAGIDRYPRKV MGK KI KRSKIK FVKV NYNHLMPTRY+VD +K
Sbjct: 40 RPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTV 99
Query: 380 A-KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFXKLXF 496
KD+ +DPA ++K R +V+FEERYK+GKNKWFF KL F
Sbjct: 100 VNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 140
Score = 42.3 bits (95), Expect = 0.002
Identities = 17/23 (73%), Positives = 22/23 (95%)
Frame = +1
Query: 127 LVLSGRYAGRKAIVVKNYDEGTS 195
LVL+GRY+GRKA++VKN D+GTS
Sbjct: 16 LVLAGRYSGRKAVIVKNIDDGTS 38
>BC010026-1|AAH10026.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 140 bits (339), Expect = 6e-33
Identities = 67/101 (66%), Positives = 77/101 (76%), Gaps = 2/101 (1%)
Frame = +2
Query: 200 KPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFS 379
+PY HA VAGIDRYPRKV MGK KI KRSKIK FVKV NYNHLMPTRY+VD +K
Sbjct: 36 RPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTV 95
Query: 380 A-KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFXKLXF 496
KD+ +DPA ++K R +V+FEERYK+GKNKWFF KL F
Sbjct: 96 VNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
Score = 58.4 bits (135), Expect = 3e-08
Identities = 25/33 (75%), Positives = 30/33 (90%)
Frame = +1
Query: 97 GKXMXPGKVVLVLSGRYAGRKAIVVKNYDEGTS 195
GK M PGKVVLVL+GRY+GRKA++VKN D+GTS
Sbjct: 2 GKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTS 34
>BC007273-1|AAH07273.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 140 bits (339), Expect = 6e-33
Identities = 67/101 (66%), Positives = 77/101 (76%), Gaps = 2/101 (1%)
Frame = +2
Query: 200 KPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFS 379
+PY HA VAGIDRYPRKV MGK KI KRSKIK FVKV NYNHLMPTRY+VD +K
Sbjct: 36 RPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTV 95
Query: 380 A-KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFXKLXF 496
KD+ +DPA ++K R +V+FEERYK+GKNKWFF KL F
Sbjct: 96 VNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
Score = 58.4 bits (135), Expect = 3e-08
Identities = 25/33 (75%), Positives = 30/33 (90%)
Frame = +1
Query: 97 GKXMXPGKVVLVLSGRYAGRKAIVVKNYDEGTS 195
GK M PGKVVLVL+GRY+GRKA++VKN D+GTS
Sbjct: 2 GKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTS 34
>BC002588-1|AAH02588.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 140 bits (339), Expect = 6e-33
Identities = 67/101 (66%), Positives = 77/101 (76%), Gaps = 2/101 (1%)
Frame = +2
Query: 200 KPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFS 379
+PY HA VAGIDRYPRKV MGK KI KRSKIK FVKV NYNHLMPTRY+VD +K
Sbjct: 36 RPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTV 95
Query: 380 A-KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFXKLXF 496
KD+ +DPA ++K R +V+FEERYK+GKNKWFF KL F
Sbjct: 96 VNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
Score = 58.4 bits (135), Expect = 3e-08
Identities = 25/33 (75%), Positives = 30/33 (90%)
Frame = +1
Query: 97 GKXMXPGKVVLVLSGRYAGRKAIVVKNYDEGTS 195
GK M PGKVVLVL+GRY+GRKA++VKN D+GTS
Sbjct: 2 GKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTS 34
>BC001700-1|AAH01700.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 140 bits (339), Expect = 6e-33
Identities = 67/101 (66%), Positives = 77/101 (76%), Gaps = 2/101 (1%)
Frame = +2
Query: 200 KPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFS 379
+PY HA VAGIDRYPRKV MGK KI KRSKIK FVKV NYNHLMPTRY+VD +K
Sbjct: 36 RPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTV 95
Query: 380 A-KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFXKLXF 496
KD+ +DPA ++K R +V+FEERYK+GKNKWFF KL F
Sbjct: 96 VNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
Score = 58.4 bits (135), Expect = 3e-08
Identities = 25/33 (75%), Positives = 30/33 (90%)
Frame = +1
Query: 97 GKXMXPGKVVLVLSGRYAGRKAIVVKNYDEGTS 195
GK M PGKVVLVL+GRY+GRKA++VKN D+GTS
Sbjct: 2 GKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTS 34
>AB061851-1|BAB79492.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 140 bits (339), Expect = 6e-33
Identities = 67/101 (66%), Positives = 77/101 (76%), Gaps = 2/101 (1%)
Frame = +2
Query: 200 KPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFS 379
+PY HA VAGIDRYPRKV MGK KI KRSKIK FVKV NYNHLMPTRY+VD +K
Sbjct: 36 RPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTV 95
Query: 380 A-KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFXKLXF 496
KD+ +DPA ++K R +V+FEERYK+GKNKWFF KL F
Sbjct: 96 VNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
Score = 58.4 bits (135), Expect = 3e-08
Identities = 25/33 (75%), Positives = 30/33 (90%)
Frame = +1
Query: 97 GKXMXPGKVVLVLSGRYAGRKAIVVKNYDEGTS 195
GK M PGKVVLVL+GRY+GRKA++VKN D+GTS
Sbjct: 2 GKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTS 34
>U25752-1|AAA93226.1| 40|Homo sapiens ribosomal protein L27
protein.
Length = 40
Score = 55.6 bits (128), Expect = 2e-07
Identities = 24/39 (61%), Positives = 31/39 (79%), Gaps = 1/39 (2%)
Frame = +2
Query: 383 KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFXKLXF 496
KD+ +DPA ++K R +V+FEERYK+GKNKWFF KL F
Sbjct: 2 KDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 40
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,576,078
Number of Sequences: 237096
Number of extensions: 1194037
Number of successful extensions: 6314
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6299
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -