Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_E19
         (1205 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB023209-1|BAA76836.1|  772|Homo sapiens KIAA0992 protein protein.     33   2.7  
BC040943-1|AAH40943.1|  498|Homo sapiens WAS protein family, mem...    32   4.8  
AL096774-6|CAC18518.1|  498|Homo sapiens WAS protein family, mem...    32   4.8  
AK075231-1|BAC11488.1|  169|Homo sapiens protein ( Homo sapiens ...    32   4.8  
AB026542-1|BAA81795.1|  498|Homo sapiens WASP-family protein pro...    32   4.8  
AJ509090-1|CAD48858.1|  625|Homo sapiens Wiskott-Aldrich syndrom...    31   8.3  
AF134304-1|AAD33053.2|  496|Homo sapiens Scar2 protein.                31   8.3  

>AB023209-1|BAA76836.1|  772|Homo sapiens KIAA0992 protein protein.
          Length = 772

 Score = 32.7 bits (71), Expect = 2.7
 Identities = 17/51 (33%), Positives = 20/51 (39%)
 Frame = +1

Query: 841 PXQXFXVXXDXXPXSPXNPAXXHPXPXPPXVTXPGSXAXPTPKXXPLXXPP 993
           P   F       P +P   +   P P PP V  P + A P P   PL  PP
Sbjct: 165 PVPPFAQPFGAEPEAPWGSSSPSPPPPPPPVFSP-TAAFPVPDVFPLPPPP 214


>BC040943-1|AAH40943.1|  498|Homo sapiens WAS protein family, member
           2 protein.
          Length = 498

 Score = 31.9 bits (69), Expect = 4.8
 Identities = 14/39 (35%), Positives = 17/39 (43%)
 Frame = +1

Query: 877 PXSPXNPAXXHPXPXPPXVTXPGSXAXPTPKXXPLXXPP 993
           P  P  PA  +P   PP ++ P   A P P   P   PP
Sbjct: 365 PPPPPPPAADYPTLPPPPLSQPTGGAPPPPPPPPPPGPP 403


>AL096774-6|CAC18518.1|  498|Homo sapiens WAS protein family, member
           2 protein.
          Length = 498

 Score = 31.9 bits (69), Expect = 4.8
 Identities = 14/39 (35%), Positives = 17/39 (43%)
 Frame = +1

Query: 877 PXSPXNPAXXHPXPXPPXVTXPGSXAXPTPKXXPLXXPP 993
           P  P  PA  +P   PP ++ P   A P P   P   PP
Sbjct: 365 PPPPPPPAADYPTLPPPPLSQPTGGAPPPPPPPPPPGPP 403


>AK075231-1|BAC11488.1|  169|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90750 fis, clone PLACE2000118, weakly similar to
           WISKOTT-ALDRICH SYNDROME PROTEIN HOMOLOG. ).
          Length = 169

 Score = 31.9 bits (69), Expect = 4.8
 Identities = 14/39 (35%), Positives = 17/39 (43%)
 Frame = +1

Query: 877 PXSPXNPAXXHPXPXPPXVTXPGSXAXPTPKXXPLXXPP 993
           P  P  PA  +P   PP ++ P   A P P   P   PP
Sbjct: 37  PPPPPPPAADYPTLPPPPLSQPTGGAPPPPPPPPPGPPP 75


>AB026542-1|BAA81795.1|  498|Homo sapiens WASP-family protein
           protein.
          Length = 498

 Score = 31.9 bits (69), Expect = 4.8
 Identities = 14/39 (35%), Positives = 17/39 (43%)
 Frame = +1

Query: 877 PXSPXNPAXXHPXPXPPXVTXPGSXAXPTPKXXPLXXPP 993
           P  P  PA  +P   PP ++ P   A P P   P   PP
Sbjct: 365 PPPPPPPAADYPTLPPPPLSQPTGGAPPPPPPPPPPGPP 403


>AJ509090-1|CAD48858.1|  625|Homo sapiens Wiskott-Aldrich syndrome
           protein family member 4 protein.
          Length = 625

 Score = 31.1 bits (67), Expect = 8.3
 Identities = 14/39 (35%), Positives = 17/39 (43%)
 Frame = +1

Query: 877 PXSPXNPAXXHPXPXPPXVTXPGSXAXPTPKXXPLXXPP 993
           P  P  PA  +P   PP ++ P   A P P   P   PP
Sbjct: 493 PPLPPPPAADYPTLPPPPLSQPTRGAPPPPPPPPPGPPP 531


>AF134304-1|AAD33053.2|  496|Homo sapiens Scar2 protein.
          Length = 496

 Score = 31.1 bits (67), Expect = 8.3
 Identities = 14/39 (35%), Positives = 17/39 (43%)
 Frame = +1

Query: 877 PXSPXNPAXXHPXPXPPXVTXPGSXAXPTPKXXPLXXPP 993
           P  P  PA  +P   PP ++ P   A P P   P   PP
Sbjct: 364 PPLPPPPAADYPTLPPPPLSQPTRGAPPPPPPPPPGPPP 402


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,787,586
Number of Sequences: 237096
Number of extensions: 607399
Number of successful extensions: 3289
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3030
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 17009285070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)