Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_E07
(1181 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 35 0.098
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 35 0.098
U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical pr... 33 0.30
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.52
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.52
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.52
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 32 0.69
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 32 0.69
Z83316-8|CAB54186.1| 409|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical pr... 31 1.6
U61288-1|AAB17543.1| 790|Caenorhabditis elegans CE protein. 31 1.6
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.6
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.6
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.6
Z66500-14|CAA91313.2| 1169|Caenorhabditis elegans Hypothetical p... 31 2.1
Z49968-13|CAA90265.2| 1169|Caenorhabditis elegans Hypothetical p... 31 2.1
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 31 2.1
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 30 2.8
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 30 2.8
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 30 3.7
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 4.8
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 4.8
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 4.8
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 29 4.8
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 6.4
AC025716-14|AAK39603.1| 227|Caenorhabditis elegans Hypothetical... 29 6.4
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 29 8.5
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 8.5
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 8.5
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 25 8.8
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 25 9.0
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical protein
C34D4.11 protein.
Length = 136
Score = 41.1 bits (92), Expect = 0.001
Identities = 27/79 (34%), Positives = 28/79 (35%)
Frame = -2
Query: 1033 GGXGPGGXRGXEWXXGGGXGGXXXGLWAGDGESXXXXGXVSXCSRXRGXXRAGAXVAXGX 854
GG G GG RG W GG G W G+G G G R G G
Sbjct: 60 GGSGWGGGRGGGWGNNGGGGN-----WGGNGGGGNGGGGRGG-GGGGGGGRGGGGGGRGG 113
Query: 853 GGXXAXGRGXXXVXRGSXG 797
GG GRG RG G
Sbjct: 114 GGGGGGGRGGGGGGRGGGG 132
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical protein
E02A10.2 protein.
Length = 385
Score = 35.1 bits (77), Expect = 0.098
Identities = 33/124 (26%), Positives = 34/124 (27%)
Frame = -2
Query: 1168 GXGXGGXXWXRXMGGXXRXXSESXSXXACXAGRRTGRXEXXXYXXGGXGPGGXRGXEWXX 989
G G GG GG + AC G G G G GG G
Sbjct: 33 GGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGC 92
Query: 988 GGGXGGXXXGLWAGDGESXXXXGXVSXCSRXRGXXRAGAXVAXGXGGXXAXGRGXXXVXR 809
GGG GG G G G C G G G GG G G
Sbjct: 93 GGGGGGCGGG--GGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCG 150
Query: 808 GSXG 797
G G
Sbjct: 151 GGGG 154
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 35.1 bits (77), Expect = 0.098
Identities = 30/115 (26%), Positives = 33/115 (28%), Gaps = 3/115 (2%)
Frame = -2
Query: 1162 GXGGXXWXRXMGGXXRXXSESXSXXACXAGRRTGRXEXXXYXXGGXGPGGXRGXEWXX-- 989
G GG W GG + GR G G G G +W
Sbjct: 34 GWGGNRWGGG-GGPGGWGNNGGGGWGRGGGRGGGDWGGNNGGGGNWGGNGGGRGDWGGNG 92
Query: 988 GGGXGGXXXGLWAGDGE-SXXXXGXVSXCSRXRGXXRAGAXVAXGXGGXXAXGRG 827
GGG GG G W G+ G G G G GG GRG
Sbjct: 93 GGGRGGGGRGDWGGNNNGGGGNWGGGGNNDGGWGGNNGGGGGGRGGGGRGGDGRG 147
Score = 31.1 bits (67), Expect = 1.6
Identities = 25/80 (31%), Positives = 28/80 (35%), Gaps = 1/80 (1%)
Frame = -2
Query: 1033 GGXGPGGXRGX-EWXXGGGXGGXXXGLWAGDGESXXXXGXVSXCSRXRGXXRAGAXVAXG 857
GG G GG RG +W GG GG G W G+G G R G G
Sbjct: 55 GGWGRGGGRGGGDW--GGNNGGG--GNWGGNGGGRGDWGGNGGGGRGGGGRGDWGGNNNG 110
Query: 856 XGGXXAXGRGXXXVXRGSXG 797
GG G G+ G
Sbjct: 111 GGGNWGGGGNNDGGWGGNNG 130
>U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical protein
F07C4.7 protein.
Length = 180
Score = 33.5 bits (73), Expect = 0.30
Identities = 32/116 (27%), Positives = 35/116 (30%)
Frame = -2
Query: 1033 GGXGPGGXRGXEWXXGGGXGGXXXGLWAGDGESXXXXGXVSXCSRXRGXXRAGAXVAXGX 854
G GPG EW GGG GG + G+ G + G R G G
Sbjct: 33 GSGGPGPRGPGEWNNGGGRGG-----FGGNNGWNNGGGGFNGNGGFNGGGRGGGRGGNGG 87
Query: 853 GGXXAXGRGXXXVXRGSXGXIRXXLXRRPXXLXGGGXAXKVEARGGFXXIGXVXGG 686
G RG RG G GGG RGG G GG
Sbjct: 88 FGDNGGLRGGNGGGRGGNGGFDD---------NGGGRGGNGGGRGGTGGFGDNGGG 134
Score = 30.3 bits (65), Expect = 2.8
Identities = 25/78 (32%), Positives = 26/78 (33%)
Frame = -2
Query: 1030 GXGPGGXRGXEWXXGGGXGGXXXGLWAGDGESXXXXGXVSXCSRXRGXXRAGAXVAXGXG 851
G G GG RG G G G GL G+G G RG G G
Sbjct: 75 GGGRGGGRG-----GNGGFGDNGGLRGGNGGGRGGNGGFDDNGGGRG-GNGGGRGGTGGF 128
Query: 850 GXXAXGRGXXXVXRGSXG 797
G GRG RG G
Sbjct: 129 GDNGGGRGGNGGGRGGNG 146
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.7 bits (71), Expect = 0.52
Identities = 20/63 (31%), Positives = 20/63 (31%)
Frame = +3
Query: 582 PXXXSXTTXAPPPXPXPLXSPPXXQ*XXPXHXXXSPPXTXPIXXKPPRASTFXAXPPPXK 761
P T PPP P P PP P PP P PP F PPP
Sbjct: 732 PGGLPPITGGPPPPPPPGGLPPISGGPPPP---PPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Query: 762 XXG 770
G
Sbjct: 789 PPG 791
Score = 29.1 bits (62), Expect = 6.4
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +3
Query: 612 PPPXPXPLXSPPXXQ*XXPXHXXXSPPXTXPIXXKPPRASTFXAXPPPXK 761
PPP P P PP P PP P P A PP K
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKK 808
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.7 bits (71), Expect = 0.52
Identities = 20/63 (31%), Positives = 20/63 (31%)
Frame = +3
Query: 582 PXXXSXTTXAPPPXPXPLXSPPXXQ*XXPXHXXXSPPXTXPIXXKPPRASTFXAXPPPXK 761
P T PPP P P PP P PP P PP F PPP
Sbjct: 732 PGGLPPITGGPPPPPPPGGLPPISGGPPPP---PPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Query: 762 XXG 770
G
Sbjct: 789 PPG 791
Score = 29.1 bits (62), Expect = 6.4
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +3
Query: 612 PPPXPXPLXSPPXXQ*XXPXHXXXSPPXTXPIXXKPPRASTFXAXPPPXK 761
PPP P P PP P PP P P A PP K
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKK 808
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.7 bits (71), Expect = 0.52
Identities = 20/63 (31%), Positives = 20/63 (31%)
Frame = +3
Query: 582 PXXXSXTTXAPPPXPXPLXSPPXXQ*XXPXHXXXSPPXTXPIXXKPPRASTFXAXPPPXK 761
P T PPP P P PP P PP P PP F PPP
Sbjct: 315 PGGLPPITGGPPPPPPPGGLPPISGGPPPP---PPPPGGCPPPPPPPPPGGFKGGPPPPP 371
Query: 762 XXG 770
G
Sbjct: 372 PPG 374
Score = 29.1 bits (62), Expect = 6.4
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +3
Query: 612 PPPXPXPLXSPPXXQ*XXPXHXXXSPPXTXPIXXKPPRASTFXAXPPPXK 761
PPP P P PP P PP P P A PP K
Sbjct: 342 PPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKK 391
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical protein
C31C9.6 protein.
Length = 965
Score = 32.3 bits (70), Expect = 0.69
Identities = 23/79 (29%), Positives = 28/79 (35%), Gaps = 2/79 (2%)
Frame = +2
Query: 803 APPXHAXXPSPXRXXSPXPRRXACXCPPXTPXPRTXRNSXXPXXTLSVXCPQPXXXTXXX 982
APP P + + PP TP P S P + S PQP +
Sbjct: 433 APPPPPSAPPTIKFPISTGTSYSSTTPPTTPKPAPPPPSRIPNPSPS---PQPAEVSKSP 489
Query: 983 SXXXPLPPXXSP--XPPSP 1033
PLPP +P PP P
Sbjct: 490 PPPPPLPPIATPSSVPPPP 508
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 32.3 bits (70), Expect = 0.69
Identities = 25/82 (30%), Positives = 27/82 (32%)
Frame = -2
Query: 1042 YXXGGXGPGGXRGXEWXXGGGXGGXXXGLWAGDGESXXXXGXVSXCSRXRGXXRAGAXVA 863
Y G GPGG G GGG GG G + G G G G G
Sbjct: 137 YGGMGGGPGGY-GMGGYGGGGGGGGDFGGYGGGGMGGGGYGGGGDGGYGGGGFGGGGMGG 195
Query: 862 XGXGGXXAXGRGXXXVXRGSXG 797
G GG G G + G G
Sbjct: 196 YG-GGMGGGGYGGGGMGGGGYG 216
Score = 29.9 bits (64), Expect = 3.7
Identities = 26/93 (27%), Positives = 28/93 (30%)
Frame = -3
Query: 1068 GPGGXXXXXTXXGXGGXGDXXGGSGXXXEXXXVXXXGCGQXTERVXXGXXEFRXVRGXGV 889
GPGG G GG GD G G G G G G G+
Sbjct: 143 GPGGYGMGGYGGGGGGGGDFGGYGGGGMGGGGYGGGGDGGYGGGGFGGGG--MGGYGGGM 200
Query: 888 XGGQXXAXRRGXGEXXRXGEGXXAWXGGAPXGY 790
GG G G G+G GG GY
Sbjct: 201 GGGGYGGGGMGGGGYGGGGDGGYGPSGGYGGGY 233
>Z83316-8|CAB54186.1| 409|Caenorhabditis elegans Hypothetical protein
B0379.7 protein.
Length = 409
Score = 31.5 bits (68), Expect = 1.2
Identities = 20/79 (25%), Positives = 24/79 (30%), Gaps = 1/79 (1%)
Frame = +2
Query: 794 PXGAPPXHAXXPSPXRXXSPXPRRXACXCP-PXTPXPRTXRNSXXPXXTLSVXCPQPXXX 970
P APP P+P P C P P P T ++ T P P
Sbjct: 56 PAAAPPQQLEQPTPAPAPESAPAPVQCPEPTPEVPQQPTQVSAPVQEITQGAPAPIPEPT 115
Query: 971 TXXXSXXXPLPPXXSPXPP 1027
P+ P SP P
Sbjct: 116 PVTAEQPTPVDPLSSPIKP 134
>Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical protein
R08B4.1a protein.
Length = 1137
Score = 31.1 bits (67), Expect = 1.6
Identities = 23/69 (33%), Positives = 26/69 (37%)
Frame = -2
Query: 1033 GGXGPGGXRGXEWXXGGGXGGXXXGLWAGDGESXXXXGXVSXCSRXRGXXRAGAXVAXGX 854
GG G GG G GGG G G AG+G + G + G AGA G
Sbjct: 801 GGNGGGGNGGGGNGNGGGAGDGNGGAGAGNG-NGAGAGNGNGAGAGNGNG-AGAGNGNGA 858
Query: 853 GGXXAXGRG 827
G G G
Sbjct: 859 GAGNGNGAG 867
Score = 30.7 bits (66), Expect = 2.1
Identities = 21/69 (30%), Positives = 22/69 (31%)
Frame = -2
Query: 1033 GGXGPGGXRGXEWXXGGGXGGXXXGLWAGDGESXXXXGXVSXCSRXRGXXRAGAXVAXGX 854
G G G G G GG G AGDG G + G AGA G
Sbjct: 792 GSNSNSGGGGGNGGGGNGGGGNGNGGGAGDGNGGAGAGNGNGAGAGNGNG-AGAGNGNGA 850
Query: 853 GGXXAXGRG 827
G G G
Sbjct: 851 GAGNGNGAG 859
>U61288-1|AAB17543.1| 790|Caenorhabditis elegans CE protein.
Length = 790
Score = 31.1 bits (67), Expect = 1.6
Identities = 23/69 (33%), Positives = 26/69 (37%)
Frame = -2
Query: 1033 GGXGPGGXRGXEWXXGGGXGGXXXGLWAGDGESXXXXGXVSXCSRXRGXXRAGAXVAXGX 854
GG G GG G GGG G G AG+G + G + G AGA G
Sbjct: 454 GGNGGGGNGGGGNGNGGGAGDGNGGAGAGNG-NGAGAGNGNGAGAGNGNG-AGAGNGNGA 511
Query: 853 GGXXAXGRG 827
G G G
Sbjct: 512 GAGNGNGAG 520
Score = 30.7 bits (66), Expect = 2.1
Identities = 21/69 (30%), Positives = 22/69 (31%)
Frame = -2
Query: 1033 GGXGPGGXRGXEWXXGGGXGGXXXGLWAGDGESXXXXGXVSXCSRXRGXXRAGAXVAXGX 854
G G G G G GG G AGDG G + G AGA G
Sbjct: 445 GSNSNSGGGGGNGGGGNGGGGNGNGGGAGDGNGGAGAGNGNGAGAGNGNG-AGAGNGNGA 503
Query: 853 GGXXAXGRG 827
G G G
Sbjct: 504 GAGNGNGAG 512
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.1 bits (67), Expect = 1.6
Identities = 16/49 (32%), Positives = 18/49 (36%)
Frame = +3
Query: 609 APPPXPXPLXSPPXXQ*XXPXHXXXSPPXTXPIXXKPPRASTFXAXPPP 755
+PPP P P SPP P + P PP T PPP
Sbjct: 236 SPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 284
Score = 31.1 bits (67), Expect = 1.6
Identities = 18/51 (35%), Positives = 19/51 (37%)
Frame = +3
Query: 603 TXAPPPXPXPLXSPPXXQ*XXPXHXXXSPPXTXPIXXKPPRASTFXAXPPP 755
T +PPP P PP P SPP P PP S PPP
Sbjct: 269 TGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGS----LPPP 315
Score = 29.5 bits (63), Expect = 4.8
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +3
Query: 609 APPPXPXPLXSPPXXQ*XXPXHXXXSPPXTXPIXXKPPR 725
+PPP P P SPP P PP PPR
Sbjct: 296 SPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPR 334
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.1 bits (67), Expect = 1.6
Identities = 16/49 (32%), Positives = 18/49 (36%)
Frame = +3
Query: 609 APPPXPXPLXSPPXXQ*XXPXHXXXSPPXTXPIXXKPPRASTFXAXPPP 755
+PPP P P SPP P + P PP T PPP
Sbjct: 257 SPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 305
Score = 31.1 bits (67), Expect = 1.6
Identities = 18/51 (35%), Positives = 19/51 (37%)
Frame = +3
Query: 603 TXAPPPXPXPLXSPPXXQ*XXPXHXXXSPPXTXPIXXKPPRASTFXAXPPP 755
T +PPP P PP P SPP P PP S PPP
Sbjct: 290 TGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGS----LPPP 336
Score = 29.5 bits (63), Expect = 4.8
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +3
Query: 609 APPPXPXPLXSPPXXQ*XXPXHXXXSPPXTXPIXXKPPR 725
+PPP P P SPP P PP PPR
Sbjct: 317 SPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPR 355
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.1 bits (67), Expect = 1.6
Identities = 16/49 (32%), Positives = 18/49 (36%)
Frame = +3
Query: 609 APPPXPXPLXSPPXXQ*XXPXHXXXSPPXTXPIXXKPPRASTFXAXPPP 755
+PPP P P SPP P + P PP T PPP
Sbjct: 242 SPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 290
Score = 31.1 bits (67), Expect = 1.6
Identities = 18/51 (35%), Positives = 19/51 (37%)
Frame = +3
Query: 603 TXAPPPXPXPLXSPPXXQ*XXPXHXXXSPPXTXPIXXKPPRASTFXAXPPP 755
T +PPP P PP P SPP P PP S PPP
Sbjct: 275 TGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGS----LPPP 321
Score = 29.5 bits (63), Expect = 4.8
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +3
Query: 609 APPPXPXPLXSPPXXQ*XXPXHXXXSPPXTXPIXXKPPR 725
+PPP P P SPP P PP PPR
Sbjct: 302 SPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPR 340
>Z66500-14|CAA91313.2| 1169|Caenorhabditis elegans Hypothetical
protein T05C12.10 protein.
Length = 1169
Score = 30.7 bits (66), Expect = 2.1
Identities = 22/70 (31%), Positives = 26/70 (37%), Gaps = 1/70 (1%)
Frame = -2
Query: 1033 GGXGPGGXRGXEWXXGGGXGGXXXGLWAGDGESXXXXGXVSXCSRXRGXXRAGAXVAXGX 854
GG G GG + G G G GDG+ G S + G AG A G
Sbjct: 672 GGSGKGGAGNGKSGDGSGDGKNNGNGGTGDGKDKNGKGSGSGDNDKSGTRAAGKGNAEGN 731
Query: 853 G-GXXAXGRG 827
G G G+G
Sbjct: 732 GKGNGNDGKG 741
>Z49968-13|CAA90265.2| 1169|Caenorhabditis elegans Hypothetical
protein T05C12.10 protein.
Length = 1169
Score = 30.7 bits (66), Expect = 2.1
Identities = 22/70 (31%), Positives = 26/70 (37%), Gaps = 1/70 (1%)
Frame = -2
Query: 1033 GGXGPGGXRGXEWXXGGGXGGXXXGLWAGDGESXXXXGXVSXCSRXRGXXRAGAXVAXGX 854
GG G GG + G G G GDG+ G S + G AG A G
Sbjct: 672 GGSGKGGAGNGKSGDGSGDGKNNGNGGTGDGKDKNGKGSGSGDNDKSGTRAAGKGNAEGN 731
Query: 853 G-GXXAXGRG 827
G G G+G
Sbjct: 732 GKGNGNDGKG 741
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 30.7 bits (66), Expect = 2.1
Identities = 22/72 (30%), Positives = 26/72 (36%)
Frame = +1
Query: 880 PAXYPSXANXAKLXPPXSHSLRXLPTTPRPDXXXLXXPPTPXXXVPXAPXPPXXXLXXPS 1059
PA YP A A PP + +P P P PP P P P PP P+
Sbjct: 99 PAPYPQHAVPAPAPPPAPYPQHAVP-APAP-YQQQPPPPPPPPHYP--PPPPHYPPPPPA 154
Query: 1060 ARSGXPXHTPXR 1095
S H+ R
Sbjct: 155 PHSAYIDHSAPR 166
Score = 30.3 bits (65), Expect = 2.8
Identities = 27/96 (28%), Positives = 32/96 (33%), Gaps = 1/96 (1%)
Frame = +2
Query: 788 SYPXGAPPXHAXXPSPXRXXS-PXPRRXACXCPPXTPXPRTXRNSXXPXXTLSVXCPQPX 964
SYP A P A P+P + P P PP P P+ + P P P
Sbjct: 86 SYPQNAVPVPAPPPAPYPQHAVPAP------APPPAPYPQHAVPAPAPYQQQPPPPPPPP 139
Query: 965 XXTXXXSXXXPLPPXXSPXPPSPXXVXXXLXPPGPA 1072
P PP P PP+P P PA
Sbjct: 140 HYP-------PPPPHYPPPPPAPHSAYIDHSAPRPA 168
Score = 28.7 bits (61), Expect = 8.5
Identities = 30/144 (20%), Positives = 36/144 (25%)
Frame = +3
Query: 555 DYXDXXTSXPXXXSXTTXAPPPXPXPLXSPPXXQ*XXPXHXXXSPPXTXPIXXKPPRAST 734
+Y T + TT PPP P P P + PP P P +A
Sbjct: 7 EYKSQTTYPESAPAATTPQPPPPPPPPKPAPYVEQSAQPQQTAPPPPPAPY---PQQAVP 63
Query: 735 FXAXPPPXKXXGRRXRXXRIXPXLPRXTXXXPRPLAXXXXXXXXXXXXXRXXPLXREQXE 914
A PP P+ P P P +
Sbjct: 64 APAPPPAPYPQHAVPAPAPPLASYPQNAVPVPAPPPAPYPQHAVPAPAPPPAPYPQHAVP 123
Query: 915 TXPXXXXLSPSPAHNPXXXPPXPP 986
P P P P PP PP
Sbjct: 124 A-PAPYQQQPPPPPPPPHYPPPPP 146
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical protein
T28C6.1 protein.
Length = 281
Score = 30.3 bits (65), Expect = 2.8
Identities = 24/77 (31%), Positives = 25/77 (32%), Gaps = 3/77 (3%)
Frame = -2
Query: 1156 GGXXWXRXMGGXXRXXSESXSXXACXAGRRTGRXEXXXYXXGGXG--PGGXRGXEWXXGG 983
GG +G S A G GR GG G GG RG G
Sbjct: 24 GGSDAGSGIGSSGGWGGSDASAGASAGGTGGGRGGGRGGSGGGRGGGSGGGRGGSGGAGA 83
Query: 982 GXGGXXXGLWAG-DGES 935
G G G W G DG S
Sbjct: 84 GGSGSGSGGWGGQDGGS 100
Score = 29.9 bits (64), Expect = 3.7
Identities = 41/179 (22%), Positives = 53/179 (29%), Gaps = 6/179 (3%)
Frame = -2
Query: 1168 GXGXGGXXWXRXMGGXXRXXSESXSXXACXAGRRTGRXEXXXYXX--GGXGPGGXRGXEW 995
G GG G S+S S G++ G + GG GG RG
Sbjct: 106 GGSQGGSQGGSSGGWGGSSRSDSGSGQGGWGGQQGGNSNAGGWGGSQGGQNGGGGRGGSG 165
Query: 994 XXGGGXG---GXXXGLWAGDGESXXXXGXVSXCSRXRGXXRAGAXVA-XGXGGXXAXGRG 827
GG G G G W G++ G RG + G G GG +G
Sbjct: 166 GQGGWGGSQDGGSQGGWG--GQNGGGQGGNQGGGGGRGGNQGGEQGGWGGQGGSQGGSQG 223
Query: 826 XXXVXRGSXGXIRXXLXRRPXXLXGGGXAXKVEARGGFXXIGXVXGGXXXXWXGXXHXW 650
G+ G + G G + GG+ G G W G W
Sbjct: 224 GSQGGWGNQGGQQGGGRGGQQGPGGWGGGGRGGGWGGWGR-GSRWGWGRPSWGGWGRGW 281
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 30.3 bits (65), Expect = 2.8
Identities = 17/61 (27%), Positives = 23/61 (37%)
Frame = +3
Query: 573 TSXPXXXSXTTXAPPPXPXPLXSPPXXQ*XXPXHXXXSPPXTXPIXXKPPRASTFXAXPP 752
T P ++ PPP P P PP + H +PP T + PP + P
Sbjct: 753 TPQPIQQQQSSIPPPPPPPP---PPHCE-PTMVHVEFTPPSTSSVPPPPPPLPPISSGAP 808
Query: 753 P 755
P
Sbjct: 809 P 809
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 30.3 bits (65), Expect = 2.8
Identities = 17/61 (27%), Positives = 23/61 (37%)
Frame = +3
Query: 573 TSXPXXXSXTTXAPPPXPXPLXSPPXXQ*XXPXHXXXSPPXTXPIXXKPPRASTFXAXPP 752
T P ++ PPP P P PP + H +PP T + PP + P
Sbjct: 753 TPQPIQQQQSSIPPPPPPPP---PPHCE-PTMVHVEFTPPSTSSVPPPPPPLPPISSGAP 808
Query: 753 P 755
P
Sbjct: 809 P 809
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 30.3 bits (65), Expect = 2.8
Identities = 25/102 (24%), Positives = 33/102 (32%), Gaps = 1/102 (0%)
Frame = -2
Query: 988 GGGXGGXXXGLWAGDGESXXXXGXVSXCSRXRGXXR-AGAXVAXGXGGXXAXGRGXXXVX 812
GGG GG G G+G G G+ + G GG G G
Sbjct: 56 GGGGGGGGGGFGGGNGGFGGGGGGSGGGGGGNNIGSLVGSLIGGGGGGGNYGGGGGNQGG 115
Query: 811 RGSXGXIRXXLXRRPXXLXGGGXAXKVEARGGFXXIGXVXGG 686
G G + + GGG + + GG G + GG
Sbjct: 116 GGGGGFNFNDIGGLINSMGGGGGGGQRQGGGG-GGFGDILGG 156
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 29.9 bits (64), Expect = 3.7
Identities = 15/60 (25%), Positives = 20/60 (33%)
Frame = +3
Query: 573 TSXPXXXSXTTXAPPPXPXPLXSPPXXQ*XXPXHXXXSPPXTXPIXXKPPRASTFXAXPP 752
T+ P PP P PP + PP T P +PP+ + PP
Sbjct: 364 TTVPPKTDPPRTEPPKTEPPTTEPPKIEPPRTEPPKTEPPPTEPPKTEPPKTTPPKTEPP 423
Score = 29.9 bits (64), Expect = 3.7
Identities = 21/77 (27%), Positives = 22/77 (28%)
Frame = +3
Query: 522 PXGXXPRXXRXDYXDXXTSXPXXXSXTTXAPPPXPXPLXSPPXXQ*XXPXHXXXSPPXTX 701
P PR T P T AP P P PP + PP T
Sbjct: 566 PRTEAPRTEPPRTEPPKTEAPRTVRPKTEAPMTVP-PRTEPPMTEAPRTEVPMTEPPKTE 624
Query: 702 PIXXKPPRASTFXAXPP 752
P PPR PP
Sbjct: 625 PPRTAPPRTEVSMTLPP 641
Score = 29.5 bits (63), Expect = 4.8
Identities = 15/51 (29%), Positives = 17/51 (33%)
Frame = +3
Query: 600 TTXAPPPXPXPLXSPPXXQ*XXPXHXXXSPPXTXPIXXKPPRASTFXAXPP 752
TT PP P PP + PP T P +PP PP
Sbjct: 363 TTTVPPKTDPPRTEPPKTEPPTTEPPKIEPPRTEPPKTEPPPTEPPKTEPP 413
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical protein
C08B11.5 protein.
Length = 388
Score = 29.5 bits (63), Expect = 4.8
Identities = 17/62 (27%), Positives = 18/62 (29%)
Frame = +1
Query: 922 PPXSHSLRXLPTTPRPDXXXLXXPPTPXXXVPXAPXPPXXXLXXPSARSGXPXHTPXRXC 1101
PP S + P P P PP P P PP P G P P
Sbjct: 266 PPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRF 325
Query: 1102 SP 1107
P
Sbjct: 326 GP 327
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.5 bits (63), Expect = 4.8
Identities = 18/61 (29%), Positives = 19/61 (31%), Gaps = 2/61 (3%)
Frame = +3
Query: 615 PPXPXPLXSPPXXQ*XXPXHXXXSPPXTXPI--XXKPPRASTFXAXPPPXKXXGRRXRXX 788
P P P PP P PP T P PPR PPP + R
Sbjct: 147 PRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPPPPRLNSHDRRAL 206
Query: 789 R 791
R
Sbjct: 207 R 207
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA binding
protein protein.
Length = 398
Score = 29.5 bits (63), Expect = 4.8
Identities = 17/62 (27%), Positives = 18/62 (29%)
Frame = +1
Query: 922 PPXSHSLRXLPTTPRPDXXXLXXPPTPXXXVPXAPXPPXXXLXXPSARSGXPXHTPXRXC 1101
PP S + P P P PP P P PP P G P P
Sbjct: 276 PPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRF 335
Query: 1102 SP 1107
P
Sbjct: 336 GP 337
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 29.5 bits (63), Expect = 4.8
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -2
Query: 1033 GGXGPGGXRGXEWXXGGGXGGXXXGLWAGDG 941
GG G G G W GGG G W G G
Sbjct: 221 GGGGGGYGSGGGWGGGGGGRDRDRGGWGGGG 251
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.1 bits (62), Expect = 6.4
Identities = 17/53 (32%), Positives = 19/53 (35%)
Frame = +3
Query: 612 PPPXPXPLXSPPXXQ*XXPXHXXXSPPXTXPIXXKPPRASTFXAXPPPXKXXG 770
PPP P + PP P PP + PP F A PPP G
Sbjct: 76 PPPGPGGIPPPP------PMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSG 122
>AC025716-14|AAK39603.1| 227|Caenorhabditis elegans Hypothetical
protein Y39G10AR.16 protein.
Length = 227
Score = 29.1 bits (62), Expect = 6.4
Identities = 12/50 (24%), Positives = 19/50 (38%)
Frame = +1
Query: 922 PPXSHSLRXLPTTPRPDXXXLXXPPTPXXXVPXAPXPPXXXLXXPSARSG 1071
PP + P P+ + P P P P PP + P +++G
Sbjct: 146 PPVEDEAKTPPEKPKVEEPAPAPAPAPAAVAPAPPPPPEPAVVQPESQAG 195
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical protein
R08B4.1b protein.
Length = 1160
Score = 28.7 bits (61), Expect = 8.5
Identities = 20/69 (28%), Positives = 21/69 (30%)
Frame = -2
Query: 1033 GGXGPGGXRGXEWXXGGGXGGXXXGLWAGDGESXXXXGXVSXCSRXRGXXRAGAXVAXGX 854
GG G GG G GGG G G G + G AGA G
Sbjct: 798 GGGGGGGGGGSGGSGGGGSNSNSGGGGGNGGGGNGGGGNGNGGGAGDGNGGAGAGNGNGA 857
Query: 853 GGXXAXGRG 827
G G G
Sbjct: 858 GAGNGNGAG 866
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical protein
B0280.13 protein.
Length = 616
Score = 28.7 bits (61), Expect = 8.5
Identities = 27/103 (26%), Positives = 34/103 (33%), Gaps = 9/103 (8%)
Frame = +2
Query: 803 APPXHAXXPSPXRXXSPXPRRXACXCPPXTPXPRTXRNSXXPXXTLSVXCPQPXXXTXXX 982
APP P + + PP TP P S P + S PQP +
Sbjct: 440 APPPPPSAPPTIKFPISTGPSYSSTTPPTTPKPAPPPPSRIPNPSPS---PQPAEVSKSP 496
Query: 983 SXXXPLPPXXSP---------XPPSPXXVXXXLXPPGPAXRXT 1084
PLPP +P PP P + + P P R T
Sbjct: 497 PPPPPLPPIATPSSVPPPPPPPPPPPPALEQEISGP-PTVRLT 538
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.7 bits (61), Expect = 8.5
Identities = 18/66 (27%), Positives = 20/66 (30%)
Frame = +1
Query: 880 PAXYPSXANXAKLXPPXSHSLRXLPTTPRPDXXXLXXPPTPXXXVPXAPXPPXXXLXXPS 1059
P P + + P H L LP PRP PP P P P P
Sbjct: 662 PNIQPPVPHPPPMGFPFQHQLTQLPGQPRPAGLPPGVPPMFNLNAPPPPGIPGYPPAPPP 721
Query: 1060 ARSGXP 1077
G P
Sbjct: 722 PGVGPP 727
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 25.4 bits (53), Expect(2) = 8.8
Identities = 14/52 (26%), Positives = 17/52 (32%)
Frame = +3
Query: 615 PPXPXPLXSPPXXQ*XXPXHXXXSPPXTXPIXXKPPRASTFXAXPPPXKXXG 770
P PL PP P PP P PP ++ PP + G
Sbjct: 291 PTESPPLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRPPASEPVG 342
Score = 21.4 bits (43), Expect(2) = 8.8
Identities = 10/32 (31%), Positives = 12/32 (37%)
Frame = +3
Query: 891 PLXREQXETXPXXXXLSPSPAHNPXXXPPXPP 986
PL E+ + SP P PP PP
Sbjct: 344 PLYSEKQHQQQLRPTTAVSPPKPPSFAPPVPP 375
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 25.4 bits (53), Expect(2) = 9.0
Identities = 14/52 (26%), Positives = 17/52 (32%)
Frame = +3
Query: 615 PPXPXPLXSPPXXQ*XXPXHXXXSPPXTXPIXXKPPRASTFXAXPPPXKXXG 770
P PL PP P PP P PP ++ PP + G
Sbjct: 69 PTESPPLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRPPASEPVG 120
Score = 21.4 bits (43), Expect(2) = 9.0
Identities = 10/32 (31%), Positives = 12/32 (37%)
Frame = +3
Query: 891 PLXREQXETXPXXXXLSPSPAHNPXXXPPXPP 986
PL E+ + SP P PP PP
Sbjct: 122 PLYSEKQHQQQLRPTTAVSPPKPPSFAPPVPP 153
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,277,272
Number of Sequences: 27780
Number of extensions: 177383
Number of successful extensions: 1250
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 540
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1048
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3234681980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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