Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_D23
         (935 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0299 - 17051570-17052474,17053542-17053755                       31   1.7  
12_02_1174 - 26696869-26698191                                         30   2.3  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   4.0  
06_03_0310 - 19453047-19453160,19453240-19453338,19453441-194535...    29   5.3  
10_03_0021 + 7129786-7130117,7130227-7130347,7131048-7131136,713...    28   9.3  
01_07_0111 - 41137822-41138973,41139453-41139540,41139850-411399...    28   9.3  

>12_02_0299 - 17051570-17052474,17053542-17053755
          Length = 372

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 17/56 (30%), Positives = 17/56 (30%)
 Frame = +1

Query: 730 PPXPXGXXXFAXLXPLPXPXXXXXXXPXXXPXXXXRXPPXXXXPXXXPPXXGXXPP 897
           PP P     F  L PLP         P   P      PP    P   PP     PP
Sbjct: 292 PPPPAFPFPFPQLPPLPHFPPLPSFYPSPPPPPPPPPPPPPSFPWPFPPLAPLFPP 347


>12_02_1174 - 26696869-26698191
          Length = 440

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 17/51 (33%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
 Frame = +2

Query: 644 PXXPPPXXXXFXXXVPGEV-XXVXXXXXXSPPPPXAXAXLP-XXXPFPXPP 790
           P  PPP         PG+    V       PPPP A   +P    P P PP
Sbjct: 218 PPSPPPPPPTVPPRTPGDTPAVVEPKPQPPPPPPRAPVKMPRVLEPKPSPP 268


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 15/53 (28%), Positives = 15/53 (28%)
 Frame = +1

Query: 772 PLPXPXXXXXXXPXXXPXXXXRXPPXXXXPXXXPPXXGXXPPXXXXXXPPXXP 930
           P P P       P   P      PP    P   PP  G  PP       P  P
Sbjct: 315 PPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPP 367


>06_03_0310 -
           19453047-19453160,19453240-19453338,19453441-19453513,
           19453598-19453708,19453795-19453956,19454064-19454340,
           19454542-19455160,19455256-19455471
          Length = 556

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +2

Query: 728 SPPPPXAXAXLPXXXPFPXPP 790
           +PPPP A A  P   P P PP
Sbjct: 172 APPPPQAPAPTPPQAPAPTPP 192


>10_03_0021 +
           7129786-7130117,7130227-7130347,7131048-7131136,
           7131375-7131459,7131609-7131771,7132861-7132937,
           7133016-7133160,7133236-7133537,7133615-7133720,
           7134781-7134935,7135556-7135712,7135799-7135891,
           7136232-7136359,7136439-7136696,7136855-7137145,
           7137235-7137318,7138335-7138468,7138557-7138784,
           7139778-7139958,7140021-7140108,7140268-7140434,
           7140750-7141012,7141117-7141120
          Length = 1216

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = +2

Query: 200 ALKWPSRTVRIPKSTISLTTWAHATYHSASATGLMS-GTRKL 322
           A   P+  +RIP S I    W+   Y++ S +G M+ GT  L
Sbjct: 498 AFSLPNWILRIPYSFIEAVVWSCVVYYTVSVSGNMTVGTNIL 539


>01_07_0111 - 41137822-41138973,41139453-41139540,41139850-41139969,
            41140165-41140211,41140796-41141029,41141305-41141505,
            41141506-41143407,41144140-41145303,41145574-41145879
          Length = 1737

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = +2

Query: 125  QLSVTSPDNIFQRENARKVNIRFCIALKW 211
            +L V   +N+ + E+ARK N+R  + L+W
Sbjct: 954  ELEVRHLENVERLEDARKANLRDMVELRW 982


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,853,784
Number of Sequences: 37544
Number of extensions: 380805
Number of successful extensions: 1227
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1157
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2682675460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)