Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_D23
(935 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50311-12|AAA92315.1| 169|Caenorhabditis elegans Hypothetical p... 38 0.008
U42830-3|AAC48275.1| 195|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z81573-3|CAB04624.3| 398|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z78016-6|CAB01441.1| 336|Caenorhabditis elegans Hypothetical pr... 30 2.7
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 3.6
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 3.6
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 3.6
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 3.6
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 3.6
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 3.6
Z70212-9|CAA94168.1| 491|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z50742-6|CAA90619.1| 491|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z81088-11|CAB03132.1| 339|Caenorhabditis elegans Hypothetical p... 28 8.3
AF016450-10|AAB65990.1| 166|Caenorhabditis elegans Hypothetical... 28 8.3
>U50311-12|AAA92315.1| 169|Caenorhabditis elegans Hypothetical
protein C25E10.10 protein.
Length = 169
Score = 38.3 bits (85), Expect = 0.008
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +1
Query: 157 PTRKCP-KGEHSVLYCPQMAEPDC--ENPEVHDFVDYVGPCDVPQCFCDRPNVRNTKTGK 327
P RK +G+ + C EP C ENPE D V C C C + VR++ TGK
Sbjct: 71 PIRKPECEGDEELKACGSACEPTCDNENPEC-DLV-----CMTNVCQCKKGLVRDSATGK 124
Query: 328 CVPESEC 348
CV +++C
Sbjct: 125 CVEKNKC 131
>U42830-3|AAC48275.1| 195|Caenorhabditis elegans Hypothetical
protein C53B7.2 protein.
Length = 195
Score = 33.5 bits (73), Expect = 0.22
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +1
Query: 199 CPQMAEPDCENPEVHDFVDYVGPCDVPQCFCDRPNVRNTKTGKCVPESEC 348
C QM P CE+P VD C P C C P + + +C+P + C
Sbjct: 38 CTQMCPPTCESPNPQCRVD----CTRPSCTC-LPGHVYSNSRQCIPANSC 82
>Z81573-3|CAB04624.3| 398|Caenorhabditis elegans Hypothetical
protein M02G9.2 protein.
Length = 398
Score = 30.7 bits (66), Expect = 1.6
Identities = 25/89 (28%), Positives = 36/89 (40%), Gaps = 1/89 (1%)
Frame = +1
Query: 103 LYLLFVVAAVGYVTGQHFPTR-KCPKGEHSVLYCPQMAEPDCENPEVHDFVDYVGPCDVP 279
L FV+A+V + + C GE C M P+ ++ + P P
Sbjct: 7 LVAFFVIASVQAIPQRTKRQNCDCTPGEAPKCGCQVMPTPEIGGGQM---ICTCSPPVPP 63
Query: 280 QCFCDRPNVRNTKTGKCVPESEC**NCVN 366
+C C NVRN TG +P NCV+
Sbjct: 64 KCVCTEGNVRNIITGPSLPALFKPYNCVS 92
>Z78016-6|CAB01441.1| 336|Caenorhabditis elegans Hypothetical
protein R186.2a protein.
Length = 336
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = +2
Query: 173 RKVNIRFCIALKWPSRTVRIPKSTISLTTWAHATYHSASATGLMSGTRKLANVF 334
R++N +FC +L +TV I ISLT + YH ++ G + G + + ++F
Sbjct: 95 REMNTQFCFSLFMMWQTVSIAVG-ISLTYTLYFKYHKLNSKGPLFGWKLVRSLF 147
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.5 bits (63), Expect = 3.6
Identities = 19/67 (28%), Positives = 19/67 (28%)
Frame = +1
Query: 730 PPXPXGXXXFAXLXPLPXPXXXXXXXPXXXPXXXXRXPPXXXXPXXXPPXXGXXPPXXXX 909
PP P G P P P P P PP P PP PP
Sbjct: 729 PPPPGGLPPITGGPPPPPP-------PGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFK 781
Query: 910 XXPPXXP 930
PP P
Sbjct: 782 GGPPPPP 788
Score = 29.1 bits (62), Expect = 4.8
Identities = 24/97 (24%), Positives = 24/97 (24%), Gaps = 2/97 (2%)
Frame = +1
Query: 634 PAITXXTPTXXXSFYXXGSGGGVXXFXXXXXLPPXPXGXXXFAXLXPLPXPXXXXXXXP- 810
P I PT S GG PP P G P P P
Sbjct: 681 PKIPLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITG 740
Query: 811 -XXXPXXXXRXPPXXXXPXXXPPXXGXXPPXXXXXXP 918
P PP P PP G PP P
Sbjct: 741 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.5 bits (63), Expect = 3.6
Identities = 19/67 (28%), Positives = 19/67 (28%)
Frame = +1
Query: 730 PPXPXGXXXFAXLXPLPXPXXXXXXXPXXXPXXXXRXPPXXXXPXXXPPXXGXXPPXXXX 909
PP P G P P P P P PP P PP PP
Sbjct: 729 PPPPGGLPPITGGPPPPPP-------PGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFK 781
Query: 910 XXPPXXP 930
PP P
Sbjct: 782 GGPPPPP 788
Score = 29.1 bits (62), Expect = 4.8
Identities = 24/97 (24%), Positives = 24/97 (24%), Gaps = 2/97 (2%)
Frame = +1
Query: 634 PAITXXTPTXXXSFYXXGSGGGVXXFXXXXXLPPXPXGXXXFAXLXPLPXPXXXXXXXP- 810
P I PT S GG PP P G P P P
Sbjct: 681 PKIPLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITG 740
Query: 811 -XXXPXXXXRXPPXXXXPXXXPPXXGXXPPXXXXXXP 918
P PP P PP G PP P
Sbjct: 741 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.5 bits (63), Expect = 3.6
Identities = 19/67 (28%), Positives = 19/67 (28%)
Frame = +1
Query: 730 PPXPXGXXXFAXLXPLPXPXXXXXXXPXXXPXXXXRXPPXXXXPXXXPPXXGXXPPXXXX 909
PP P G P P P P P PP P PP PP
Sbjct: 312 PPPPGGLPPITGGPPPPPP-------PGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFK 364
Query: 910 XXPPXXP 930
PP P
Sbjct: 365 GGPPPPP 371
Score = 29.1 bits (62), Expect = 4.8
Identities = 24/97 (24%), Positives = 24/97 (24%), Gaps = 2/97 (2%)
Frame = +1
Query: 634 PAITXXTPTXXXSFYXXGSGGGVXXFXXXXXLPPXPXGXXXFAXLXPLPXPXXXXXXXP- 810
P I PT S GG PP P G P P P
Sbjct: 264 PKIPLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITG 323
Query: 811 -XXXPXXXXRXPPXXXXPXXXPPXXGXXPPXXXXXXP 918
P PP P PP G PP P
Sbjct: 324 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 360
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/67 (29%), Positives = 20/67 (29%)
Frame = +1
Query: 730 PPXPXGXXXFAXLXPLPXPXXXXXXXPXXXPXXXXRXPPXXXXPXXXPPXXGXXPPXXXX 909
PP P G A P P P P PP P PP G PP
Sbjct: 240 PPPPKGSPPLAGSGSPPPPPAAGSPPP---PRTGSPPPPPTGSPPP-PPAGGSPPPPRAG 295
Query: 910 XXPPXXP 930
PP P
Sbjct: 296 SPPPPPP 302
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/67 (29%), Positives = 20/67 (29%)
Frame = +1
Query: 730 PPXPXGXXXFAXLXPLPXPXXXXXXXPXXXPXXXXRXPPXXXXPXXXPPXXGXXPPXXXX 909
PP P G A P P P P PP P PP G PP
Sbjct: 261 PPPPKGSPPLAGSGSPPPPPAAGSPPP---PRTGSPPPPPTGSPPP-PPAGGSPPPPRAG 316
Query: 910 XXPPXXP 930
PP P
Sbjct: 317 SPPPPPP 323
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/67 (29%), Positives = 20/67 (29%)
Frame = +1
Query: 730 PPXPXGXXXFAXLXPLPXPXXXXXXXPXXXPXXXXRXPPXXXXPXXXPPXXGXXPPXXXX 909
PP P G A P P P P PP P PP G PP
Sbjct: 246 PPPPKGSPPLAGSGSPPPPPAAGSPPP---PRTGSPPPPPTGSPPP-PPAGGSPPPPRAG 301
Query: 910 XXPPXXP 930
PP P
Sbjct: 302 SPPPPPP 308
>Z70212-9|CAA94168.1| 491|Caenorhabditis elegans Hypothetical
protein R04D3.1 protein.
Length = 491
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Frame = +1
Query: 103 LYLLFVVAAVGYVTGQHFPTRKCPKGEHSVLYCPQMAEPDCENPEV--HDFVDYVGPC 270
L L F VA VGY+ + RK PKG + + + N E+ + GPC
Sbjct: 5 LILAFFVATVGYLVHFYLKVRKYPKGPFPLPVIGNLHQIPGGNLEIWFDELAKIYGPC 62
>Z50742-6|CAA90619.1| 491|Caenorhabditis elegans Hypothetical
protein R04D3.1 protein.
Length = 491
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Frame = +1
Query: 103 LYLLFVVAAVGYVTGQHFPTRKCPKGEHSVLYCPQMAEPDCENPEV--HDFVDYVGPC 270
L L F VA VGY+ + RK PKG + + + N E+ + GPC
Sbjct: 5 LILAFFVATVGYLVHFYLKVRKYPKGPFPLPVIGNLHQIPGGNLEIWFDELAKIYGPC 62
>Z81088-11|CAB03132.1| 339|Caenorhabditis elegans Hypothetical
protein F53F1.11 protein.
Length = 339
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2
Query: 403 LQTDTLILFTCIDLHNFINIQIPEHIC 323
L+T+T +L IDL NF+ + HIC
Sbjct: 168 LETETGVLTGVIDLTNFVAVYAVAHIC 194
>AF016450-10|AAB65990.1| 166|Caenorhabditis elegans Hypothetical
protein B0238.12 protein.
Length = 166
Score = 28.3 bits (60), Expect = 8.3
Identities = 20/68 (29%), Positives = 24/68 (35%)
Frame = +1
Query: 145 GQHFPTRKCPKGEHSVLYCPQMAEPDCENPEVHDFVDYVGPCDVPQCFCDRPNVRNTKTG 324
GQ P C C EP C NP C C C VRN T
Sbjct: 32 GQRLP---CRGRNEEYKTCGTACEPSCTNPNPM----CTKQCINNVCQCRSGYVRNEITR 84
Query: 325 KCVPESEC 348
+CV +++C
Sbjct: 85 QCVRQAQC 92
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,929,672
Number of Sequences: 27780
Number of extensions: 301789
Number of successful extensions: 936
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 847
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2412704140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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