Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_D21
         (877 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1500 + 34010819-34011016,34013267-34013308,34014195-340142...    30   2.8  
12_02_0131 - 14030721-14030774,14030848-14031027,14032050-140323...    29   6.5  
02_01_0008 - 50576-50671,50767-50829,50918-50961,51048-51129,522...    29   6.5  

>04_04_1500 +
           34010819-34011016,34013267-34013308,34014195-34014204,
           34014526-34014586,34014621-34014678,34015266-34015412,
           34015643-34016205,34018942-34019728
          Length = 621

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 23/72 (31%), Positives = 28/72 (38%)
 Frame = +2

Query: 110 GVLIATCLTSVMSDEPTTEPICEQAFGDVGPXGAYFKLYSYNQETKKCEEFIYGGCQGND 289
           G LIAT   S  + +P          G  GP G        N +TK CE F+ G C   D
Sbjct: 552 GELIATISPSTPAKKPAGSAAGAAPAGRGGPGGRS------NYKTKLCENFVKGTCTFGD 605

Query: 290 NRFNTLAECEQK 325
                  E EQ+
Sbjct: 606 RCHFAHGENEQR 617


>12_02_0131 -
           14030721-14030774,14030848-14031027,14032050-14032303,
           14034414-14034488,14034682-14034910
          Length = 263

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +1

Query: 163 GADMRAGFWRCGP 201
           GA +R GFW+CGP
Sbjct: 64  GASVRLGFWQCGP 76


>02_01_0008 -
           50576-50671,50767-50829,50918-50961,51048-51129,
           52205-52371,52502-52654,52780-52960,53452-53540,
           53599-53799,54804-55147,55397-55626
          Length = 549

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 18/40 (45%), Positives = 21/40 (52%)
 Frame = +2

Query: 80  CLRSVLFLFTGVLIATCLTSVMSDEPTTEPICEQAFGDVG 199
           CL +VL  +TGVL+  CL S    E T   I   AFG  G
Sbjct: 220 CLFAVLAWYTGVLLRRCLDSKEGLE-TYPDIGHAAFGTTG 258


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,108,653
Number of Sequences: 37544
Number of extensions: 268593
Number of successful extensions: 477
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 470
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 477
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)