Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_D15
         (884 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1291 - 32404716-32404946,32405377-32405478,32405731-324059...    31   1.6  
12_01_0280 + 2027708-2028169,2028287-2028403,2028493-2029746           29   6.6  
11_04_0348 - 16632102-16632188,16632326-16632391,16632487-166325...    29   6.6  

>04_04_1291 -
           32404716-32404946,32405377-32405478,32405731-32405910,
           32406023-32406100,32407501-32407620,32407713-32407805,
           32408369-32408443,32408673-32408828,32408957-32409040,
           32409773-32410450,32411814-32411877,32411968-32411978
          Length = 623

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
 Frame = +2

Query: 155 QSKQLAEDFFLREPVDARIRKVKDEPKEESHPTLKVEMQTIRLNPDSQKIILDTLRYIHG 334
           + K LAE + L+EP ++     KD   +ES     +   T     D  KI+LD +  IH 
Sbjct: 260 EHKSLAETYLLQEPDNS-----KDMGAKESKHDGVISTGT----SDDGKIVLDIIEAIHA 310

Query: 335 SEFKLGSAS--LYKDKGSNLGNRYWME 409
           +E K   A   +Y ++   L  +Y  E
Sbjct: 311 AERKQADADAYMYSEEKRKLKEKYEKE 337


>12_01_0280 + 2027708-2028169,2028287-2028403,2028493-2029746
          Length = 610

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = -3

Query: 477 ELCIS-GFMLRE*SHPPWTTKLPLSIQYLFPRFEPLSL*RLALPNLNSEP 331
           ++C+  GF++ E S PPWT  +       FP   P+   R  L  +   P
Sbjct: 411 KICVGLGFLISELSSPPWTNSVHAFASNYFPLVLPVGSYREKLNFIRQMP 460


>11_04_0348 -
           16632102-16632188,16632326-16632391,16632487-16632571,
           16632951-16633044,16633417-16633474,16633767-16633807,
           16633919-16634018
          Length = 176

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 12/23 (52%), Positives = 18/23 (78%)
 Frame = +2

Query: 254 LKVEMQTIRLNPDSQKIILDTLR 322
           LK+ +Q  + NP+SQ +IL+TLR
Sbjct: 128 LKMLIQMRKYNPESQSVILETLR 150


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,545,087
Number of Sequences: 37544
Number of extensions: 308033
Number of successful extensions: 634
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 634
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)