BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_D14
(867 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal... 24 6.9
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 23 9.1
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein. 23 9.1
AF533894-1|AAM97679.1| 156|Anopheles gambiae ascorbate transpor... 23 9.1
AF533893-1|AAM97678.1| 570|Anopheles gambiae ascorbate transpor... 23 9.1
>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
growth factor receptorprotein.
Length = 1433
Score = 23.8 bits (49), Expect = 6.9
Identities = 13/40 (32%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Frame = +2
Query: 266 QCSSC--AKYRRPSDSSFENRRRAARSKPKVCSQCHQSRK 379
QC C KY+ S ++ R K C CHQ K
Sbjct: 488 QCLECKNVKYKGKCLDSCKSLPRLYSVDSKTCGDCHQECK 527
>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
Length = 3320
Score = 23.4 bits (48), Expect = 9.1
Identities = 7/25 (28%), Positives = 16/25 (64%)
Frame = +2
Query: 554 RYRRHASEDQEELRQYNEHFLIPRD 628
++R H ++DQ L+ ++ +PR+
Sbjct: 1572 KFRMHIAKDQSTLKVKSQSIAVPRE 1596
>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
Length = 3318
Score = 23.4 bits (48), Expect = 9.1
Identities = 7/25 (28%), Positives = 16/25 (64%)
Frame = +2
Query: 554 RYRRHASEDQEELRQYNEHFLIPRD 628
++R H ++DQ L+ ++ +PR+
Sbjct: 1573 KFRMHIAKDQSTLKVKSQSIAVPRE 1597
>AF533894-1|AAM97679.1| 156|Anopheles gambiae ascorbate transporter
protein.
Length = 156
Score = 23.4 bits (48), Expect = 9.1
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -2
Query: 545 YQYIYGLGLNRRKRWNRQFP 486
+ + YG+ L RR +W R P
Sbjct: 128 FDFPYGMQLMRRWKWTRYVP 147
>AF533893-1|AAM97678.1| 570|Anopheles gambiae ascorbate transporter
protein.
Length = 570
Score = 23.4 bits (48), Expect = 9.1
Identities = 10/36 (27%), Positives = 14/36 (38%)
Frame = +2
Query: 134 GAVLCSGFVPEVHPADLQATANTAPDNTYSATSWPG 241
G + +G PE HPA D + +PG
Sbjct: 262 GVLTATGVFPEGHPARTDVRLRVLQDAEWFRVPYPG 297
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 763,696
Number of Sequences: 2352
Number of extensions: 16997
Number of successful extensions: 82
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 82
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 92613024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -