Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_D12
(911 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 35 0.093
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 35 0.093
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 35 0.093
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 32 0.49
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 29 3.5
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 3.5
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 4.6
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 4.6
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 4.6
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 6.1
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 6.1
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 34.7 bits (76), Expect = 0.093
Identities = 19/63 (30%), Positives = 20/63 (31%), Gaps = 2/63 (3%)
Frame = +1
Query: 712 PPXPFXXPGXS--PXXPPPXXXXXXXXXXXXXXXXXXSGXPXPXPXPXPXGLXSGXXXPP 885
PP P P + P PPP G P P P P P G G PP
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Query: 886 XXG 894
G
Sbjct: 789 PPG 791
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 34.7 bits (76), Expect = 0.093
Identities = 19/63 (30%), Positives = 20/63 (31%), Gaps = 2/63 (3%)
Frame = +1
Query: 712 PPXPFXXPGXS--PXXPPPXXXXXXXXXXXXXXXXXXSGXPXPXPXPXPXGLXSGXXXPP 885
PP P P + P PPP G P P P P P G G PP
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Query: 886 XXG 894
G
Sbjct: 789 PPG 791
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 34.7 bits (76), Expect = 0.093
Identities = 19/63 (30%), Positives = 20/63 (31%), Gaps = 2/63 (3%)
Frame = +1
Query: 712 PPXPFXXPGXS--PXXPPPXXXXXXXXXXXXXXXXXXSGXPXPXPXPXPXGLXSGXXXPP 885
PP P P + P PPP G P P P P P G G PP
Sbjct: 312 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 371
Query: 886 XXG 894
G
Sbjct: 372 PPG 374
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 32.3 bits (70), Expect = 0.49
Identities = 22/81 (27%), Positives = 22/81 (27%), Gaps = 2/81 (2%)
Frame = +1
Query: 649 FPWXLPPGXSCKXPXXIPXVXPPXPFXXPGXSPXXPPPXXXXXXXXXXXXXXXXXXSGXP 828
FP P S P P PP P P SP P S P
Sbjct: 453 FPISTGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVP 512
Query: 829 XPXPX--PXPXGLXSGXXXPP 885
P P P P L PP
Sbjct: 513 PPPPPPPPPPPALEQEISGPP 533
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +1
Query: 670 GXSCKXPXXIPXVXPPXPFXXPGXSPXXPPP 762
G SC P P PP P P P PPP
Sbjct: 238 GCSCLPPPPSPVCMPPPPPPCPMPIPCPPPP 268
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 5/47 (10%)
Frame = +1
Query: 637 IPGVFPWXLPPGXSCKXPXXIPXVX-----PPXPFXXPGXSPXXPPP 762
IPG P PPG P IP + PP P G + PPP
Sbjct: 712 IPGYPPAPPPPGVGPPPPQGIPPMGFDPNKPPPPMFQQGFNAGAPPP 758
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/59 (27%), Positives = 18/59 (30%)
Frame = +1
Query: 733 PGXSPXXPPPXXXXXXXXXXXXXXXXXXSGXPXPXPXPXPXGLXSGXXXPPXXGXXPHP 909
P SP PPP +G P P P +G PP G P P
Sbjct: 233 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 291
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/59 (27%), Positives = 18/59 (30%)
Frame = +1
Query: 733 PGXSPXXPPPXXXXXXXXXXXXXXXXXXSGXPXPXPXPXPXGLXSGXXXPPXXGXXPHP 909
P SP PPP +G P P P +G PP G P P
Sbjct: 254 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 312
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/59 (27%), Positives = 18/59 (30%)
Frame = +1
Query: 733 PGXSPXXPPPXXXXXXXXXXXXXXXXXXSGXPXPXPXPXPXGLXSGXXXPPXXGXXPHP 909
P SP PPP +G P P P +G PP G P P
Sbjct: 239 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 297
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.7 bits (61), Expect = 6.1
Identities = 18/58 (31%), Positives = 18/58 (31%), Gaps = 2/58 (3%)
Frame = +3
Query: 744 PXXTPPVXPXXPPARSXXPXSP--LXLRXXXXLPXTPXRXXPXXXGXXXPXXXXXPPP 911
P PP P PP RS P P P TP P P PPP
Sbjct: 139 PPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPPPP 196
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +1
Query: 652 PWXLPPGXSCKXPXXIPXVXPPXPFXXPGXSPXXPPP 762
P PP C P P P P P P PPP
Sbjct: 36 PMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPP 72
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,480,806
Number of Sequences: 27780
Number of extensions: 174373
Number of successful extensions: 417
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 367
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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