Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_D11
(936 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 128 4e-30
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 128 4e-30
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 128 4e-30
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 128 4e-30
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 128 4e-30
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 87 2e-17
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 77 2e-14
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 75 1e-13
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 54 1e-07
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 54 1e-07
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 53 3e-07
AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-lik... 42 5e-04
AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical ... 42 8e-04
AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical ... 41 0.001
Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical pr... 40 0.003
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 39 0.006
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 38 0.010
Z32681-5|CAA83606.1| 341|Caenorhabditis elegans Hypothetical pr... 37 0.018
U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical p... 36 0.055
U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical pr... 35 0.096
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 33 0.39
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 33 0.39
AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical ... 32 0.68
AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical... 29 3.6
Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical pr... 29 6.3
U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical pr... 29 6.3
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 128 bits (310), Expect = 4e-30
Identities = 62/65 (95%), Positives = 64/65 (98%)
Frame = +1
Query: 91 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 270
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 271 IQKEA 285
IQKE+
Sbjct: 61 IQKES 65
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 128 bits (310), Expect = 4e-30
Identities = 62/65 (95%), Positives = 64/65 (98%)
Frame = +1
Query: 91 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 270
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 271 IQKEA 285
IQKE+
Sbjct: 61 IQKES 65
Score = 128 bits (310), Expect = 4e-30
Identities = 62/65 (95%), Positives = 64/65 (98%)
Frame = +1
Query: 91 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 270
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 271 IQKEA 285
IQKE+
Sbjct: 137 IQKES 141
Score = 128 bits (310), Expect = 4e-30
Identities = 62/65 (95%), Positives = 64/65 (98%)
Frame = +1
Query: 91 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 270
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 271 IQKEA 285
IQKE+
Sbjct: 213 IQKES 217
Score = 128 bits (310), Expect = 4e-30
Identities = 62/65 (95%), Positives = 64/65 (98%)
Frame = +1
Query: 91 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 270
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 271 IQKEA 285
IQKE+
Sbjct: 289 IQKES 293
Score = 128 bits (310), Expect = 4e-30
Identities = 62/65 (95%), Positives = 64/65 (98%)
Frame = +1
Query: 91 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 270
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 271 IQKEA 285
IQKE+
Sbjct: 365 IQKES 369
Score = 126 bits (304), Expect = 2e-29
Identities = 61/65 (93%), Positives = 63/65 (96%)
Frame = +1
Query: 91 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 270
MQIFVKTL GKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 271 IQKEA 285
IQKE+
Sbjct: 441 IQKES 445
Score = 93.5 bits (222), Expect = 2e-19
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = +1
Query: 91 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAG 231
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAG
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 503
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 128 bits (310), Expect = 4e-30
Identities = 62/65 (95%), Positives = 64/65 (98%)
Frame = +1
Query: 91 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 270
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 271 IQKEA 285
IQKE+
Sbjct: 61 IQKES 65
Score = 128 bits (310), Expect = 4e-30
Identities = 62/65 (95%), Positives = 64/65 (98%)
Frame = +1
Query: 91 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 270
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 271 IQKEA 285
IQKE+
Sbjct: 137 IQKES 141
Score = 128 bits (310), Expect = 4e-30
Identities = 62/65 (95%), Positives = 64/65 (98%)
Frame = +1
Query: 91 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 270
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 271 IQKEA 285
IQKE+
Sbjct: 213 IQKES 217
Score = 128 bits (310), Expect = 4e-30
Identities = 62/65 (95%), Positives = 64/65 (98%)
Frame = +1
Query: 91 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 270
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 271 IQKEA 285
IQKE+
Sbjct: 289 IQKES 293
Score = 128 bits (310), Expect = 4e-30
Identities = 62/65 (95%), Positives = 64/65 (98%)
Frame = +1
Query: 91 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 270
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 271 IQKEA 285
IQKE+
Sbjct: 365 IQKES 369
Score = 128 bits (310), Expect = 4e-30
Identities = 62/65 (95%), Positives = 64/65 (98%)
Frame = +1
Query: 91 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 270
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 271 IQKEA 285
IQKE+
Sbjct: 517 IQKES 521
Score = 128 bits (310), Expect = 4e-30
Identities = 62/65 (95%), Positives = 64/65 (98%)
Frame = +1
Query: 91 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 270
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 271 IQKEA 285
IQKE+
Sbjct: 593 IQKES 597
Score = 128 bits (310), Expect = 4e-30
Identities = 62/65 (95%), Positives = 64/65 (98%)
Frame = +1
Query: 91 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 270
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 271 IQKEA 285
IQKE+
Sbjct: 669 IQKES 673
Score = 128 bits (310), Expect = 4e-30
Identities = 62/65 (95%), Positives = 64/65 (98%)
Frame = +1
Query: 91 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 270
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 271 IQKEA 285
IQKE+
Sbjct: 745 IQKES 749
Score = 128 bits (310), Expect = 4e-30
Identities = 62/65 (95%), Positives = 64/65 (98%)
Frame = +1
Query: 91 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 270
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 271 IQKEA 285
IQKE+
Sbjct: 821 IQKES 825
Score = 126 bits (304), Expect = 2e-29
Identities = 61/65 (93%), Positives = 63/65 (96%)
Frame = +1
Query: 91 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 270
MQIFVKTL GKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 271 IQKEA 285
IQKE+
Sbjct: 441 IQKES 445
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 128 bits (310), Expect = 4e-30
Identities = 62/65 (95%), Positives = 64/65 (98%)
Frame = +1
Query: 91 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 270
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 271 IQKEA 285
IQKE+
Sbjct: 61 IQKES 65
Score = 128 bits (310), Expect = 4e-30
Identities = 62/65 (95%), Positives = 64/65 (98%)
Frame = +1
Query: 91 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 270
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 271 IQKEA 285
IQKE+
Sbjct: 137 IQKES 141
Score = 128 bits (310), Expect = 4e-30
Identities = 62/65 (95%), Positives = 64/65 (98%)
Frame = +1
Query: 91 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 270
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 271 IQKEA 285
IQKE+
Sbjct: 213 IQKES 217
Score = 128 bits (310), Expect = 4e-30
Identities = 62/65 (95%), Positives = 64/65 (98%)
Frame = +1
Query: 91 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 270
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 271 IQKEA 285
IQKE+
Sbjct: 289 IQKES 293
Score = 128 bits (310), Expect = 4e-30
Identities = 62/65 (95%), Positives = 64/65 (98%)
Frame = +1
Query: 91 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 270
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 271 IQKEA 285
IQKE+
Sbjct: 365 IQKES 369
Score = 128 bits (310), Expect = 4e-30
Identities = 62/65 (95%), Positives = 64/65 (98%)
Frame = +1
Query: 91 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 270
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 271 IQKEA 285
IQKE+
Sbjct: 441 IQKES 445
Score = 128 bits (310), Expect = 4e-30
Identities = 62/65 (95%), Positives = 64/65 (98%)
Frame = +1
Query: 91 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 270
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 271 IQKEA 285
IQKE+
Sbjct: 517 IQKES 521
Score = 128 bits (310), Expect = 4e-30
Identities = 62/65 (95%), Positives = 64/65 (98%)
Frame = +1
Query: 91 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 270
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 271 IQKEA 285
IQKE+
Sbjct: 593 IQKES 597
Score = 128 bits (310), Expect = 4e-30
Identities = 62/65 (95%), Positives = 64/65 (98%)
Frame = +1
Query: 91 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 270
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 271 IQKEA 285
IQKE+
Sbjct: 669 IQKES 673
Score = 128 bits (310), Expect = 4e-30
Identities = 62/65 (95%), Positives = 64/65 (98%)
Frame = +1
Query: 91 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 270
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 271 IQKEA 285
IQKE+
Sbjct: 745 IQKES 749
Score = 127 bits (307), Expect = 1e-29
Identities = 61/65 (93%), Positives = 64/65 (98%)
Frame = +1
Query: 91 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 270
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 271 IQKEA 285
IQK++
Sbjct: 821 IQKQS 825
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 128 bits (310), Expect = 4e-30
Identities = 62/65 (95%), Positives = 64/65 (98%)
Frame = +1
Query: 91 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 270
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 271 IQKEA 285
IQKE+
Sbjct: 61 IQKES 65
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 86.6 bits (205), Expect = 2e-17
Identities = 37/61 (60%), Positives = 49/61 (80%)
Frame = +1
Query: 91 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 270
M I VKTLTGK I L++EP+D +E +K K+++KEGIPP QQRLIFAGKQ+ D +T +DY
Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYK 60
Query: 271 I 273
+
Sbjct: 61 V 61
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 76.6 bits (180), Expect = 2e-14
Identities = 34/65 (52%), Positives = 48/65 (73%)
Frame = +1
Query: 88 KMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 267
K+ + VKTL GKTI + ++ +DT+E +K K+Q+K G+PP+QQRLIF QLE+ R L Y
Sbjct: 160 KLTVSVKTLFGKTIPISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLENDRALFAY 219
Query: 268 NIQKE 282
NI+ E
Sbjct: 220 NIRDE 224
Score = 34.7 bits (76), Expect = 0.096
Identities = 19/42 (45%), Positives = 27/42 (64%)
Frame = +1
Query: 73 SVRRVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 198
SV M + VKT TGKTIT+E +NVK +++DK+G+
Sbjct: 53 SVDSKTMLLSVKTSTGKTITVEAP-----KNVKTEVRDKQGV 89
Score = 32.7 bits (71), Expect = 0.39
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +1
Query: 112 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 276
+TG IT VE SD I+++ K+ + + P ++ +D RT+SDYNI+
Sbjct: 98 VTGDPIT--VEASDAIKDLNFKVAEAQRKPHQPSNIVLC----KDQRTISDYNIK 146
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 74.5 bits (175), Expect = 1e-13
Identities = 36/37 (97%), Positives = 36/37 (97%)
Frame = +1
Query: 91 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 201
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIP
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 37
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 54.4 bits (125), Expect = 1e-07
Identities = 30/63 (47%), Positives = 42/63 (66%)
Frame = +1
Query: 97 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 276
+FVKTL +T+ LEV ++ + ++K KI+ EGIP +QRL +AG+QLED SD I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGID 56
Query: 277 KEA 285
EA
Sbjct: 57 SEA 59
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 54.4 bits (125), Expect = 1e-07
Identities = 30/63 (47%), Positives = 42/63 (66%)
Frame = +1
Query: 97 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 276
+FVKTL +T+ LEV ++ + ++K KI+ EGIP +QRL +AG+QLED SD I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGID 56
Query: 277 KEA 285
EA
Sbjct: 57 SEA 59
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 53.2 bits (122), Expect = 3e-07
Identities = 26/66 (39%), Positives = 41/66 (62%)
Frame = +1
Query: 88 KMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 267
+ QIFVK L G + ++ DT+ ++K I+ + IP + L F+GK+LED ++ DY
Sbjct: 153 EFQIFVKVL-GVSYAFKIHREDTVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGDY 211
Query: 268 NIQKEA 285
NIQK +
Sbjct: 212 NIQKSS 217
>AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform b protein.
Length = 47
Score = 42.3 bits (95), Expect = 5e-04
Identities = 20/46 (43%), Positives = 32/46 (69%)
Frame = +1
Query: 97 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGK 234
+FVKTL +T+ LEV ++ + ++K KI+ EGIP +QRL +A +
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAAR 46
>AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical
protein F52C6.3 protein.
Length = 197
Score = 41.5 bits (93), Expect = 8e-04
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Frame = +1
Query: 91 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLE---DGRTLS 261
++I+V+ G+T TL+ SDT+ +VKAKI +K I PN Q+L+ L+ D TL
Sbjct: 103 IRIYVEN-AGRTCTLDTSASDTMASVKAKIWEKLRILPNTQKLLLENWDLDLFSDHSTLF 161
Query: 262 DYNIQ 276
D + +
Sbjct: 162 DNSFE 166
Score = 30.3 bits (65), Expect = 2.1
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +1
Query: 91 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQ-LEDGRTLSDY 267
M + +KT TGK IT+E S VK +++DK+G+ G Q +E T+ D
Sbjct: 1 MLLSIKTSTGKNITVEAPKS-----VKTEVRDKQGVVFTVSYDKGTGNQIIEMEDTVQDV 55
Query: 268 NIQK 279
IQ+
Sbjct: 56 KIQE 59
>AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical
protein F14D2.11 protein.
Length = 110
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/66 (37%), Positives = 33/66 (50%)
Frame = +1
Query: 88 KMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 267
K Q FV+ L GKT TL V SDT+E K ++ R+ + GK L D T +Y
Sbjct: 42 KFQYFVR-LNGKTRTLNVNASDTVEQGKMQLCHN----ARSTRMSYGGKPLSDQITFGEY 96
Query: 268 NIQKEA 285
NI +
Sbjct: 97 NISNNS 102
>Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical
protein ZK20.3 protein.
Length = 372
Score = 39.9 bits (89), Expect = 0.003
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Frame = +1
Query: 34 FLKILPFPCGMVDSVRRVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPN 207
F K++ C +++ V + + +TLT LE+ TI VKA + ++G P
Sbjct: 34 FFKMVFLFCSFINNQMMV-LSVTFRTLTQVNFNLELNEDQTIAEVKALVASEKGDDYAPE 92
Query: 208 QQRLIFAGKQLEDGRTLSDYNIQKEAYPFPWCSRWEVKNI 327
Q+LI+ GK L+D + + + S+ +V +
Sbjct: 93 LQKLIYNGKILDDSVKVGEVGFDSSKFVVVMLSKRKVTEV 132
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 38.7 bits (86), Expect = 0.006
Identities = 20/51 (39%), Positives = 30/51 (58%)
Frame = +1
Query: 133 LEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKEA 285
L V SDTI ++K +I + + R++ GK LED +L+ YNIQ+ A
Sbjct: 210 LRVCGSDTIRHIKLRINSLAKVDISSFRMVLRGKLLEDHHSLAYYNIQEGA 260
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 37.9 bits (84), Expect = 0.010
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = +1
Query: 115 TGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 279
+G L V SDTI VK I + + R++ K LED TL+ YNIQ+
Sbjct: 181 SGNYRNLWVRGSDTIRQVKLTINSLANVDISSFRMVLRDKVLEDDHTLAYYNIQE 235
>Z32681-5|CAA83606.1| 341|Caenorhabditis elegans Hypothetical
protein F56F3.4 protein.
Length = 341
Score = 37.1 bits (82), Expect = 0.018
Identities = 17/56 (30%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +1
Query: 121 KTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED-GRTLSDYNIQKEA 285
K I +E++ +T+ +K +I+ + + N+Q L+F G +L+D +T++D I +A
Sbjct: 32 KQIVVEMKDKETVSILKNRIEQETEVLTNRQVLLFKGMELKDNNKTMTDCGINSDA 87
>U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical
protein C16C8.11 protein.
Length = 214
Score = 35.5 bits (78), Expect = 0.055
Identities = 18/67 (26%), Positives = 35/67 (52%)
Frame = +1
Query: 67 VDSVRRVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 246
V++ +V ++ G+ ++ +++E +K KI+ + GIP + L GK L D
Sbjct: 135 VETCTKVVDLCIAVSMPGRLFSIGANKMESVEQLKMKIECQTGIPRTKFWLRLHGKPLYD 194
Query: 247 GRTLSDY 267
+ L+DY
Sbjct: 195 DKKLADY 201
>U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical
protein C16C8.14 protein.
Length = 233
Score = 34.7 bits (76), Expect = 0.096
Identities = 20/49 (40%), Positives = 25/49 (51%)
Frame = +1
Query: 133 LEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 279
L V SDTI +K +I GI R K LED TL+ YNI++
Sbjct: 176 LRVCGSDTIRQIKPRINSLAGIDTISFRTFCDDKFLEDDHTLAHYNIRE 224
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 32.7 bits (71), Expect = 0.39
Identities = 13/54 (24%), Positives = 31/54 (57%)
Frame = +1
Query: 112 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 273
+ G + ++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNL 637
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 32.7 bits (71), Expect = 0.39
Identities = 13/54 (24%), Positives = 31/54 (57%)
Frame = +1
Query: 112 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 273
+ G + ++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNL 637
>AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical
protein F54D10.7 protein.
Length = 264
Score = 31.9 bits (69), Expect = 0.68
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = +1
Query: 112 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 276
L G I +E++ DTI V + G+ ++QRL+ K+L+ +TL + I+
Sbjct: 189 LHGSRIPMELDSLDTIYTVGMALLKHGGLALHRQRLMLNDKELQYNQTLEEAGIK 243
>AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical
protein F52C6.2 protein.
Length = 110
Score = 29.5 bits (63), Expect = 3.6
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +1
Query: 91 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQ-LEDGRTLSDY 267
M + +KT TGKTIT+E S VK +++ K+G+ AG Q +E T+ D
Sbjct: 1 MLLSIKTSTGKTITVEAPKS-----VKTEVRYKQGVVFAVSYDKDAGNQIIEMEDTVQDV 55
Query: 268 NIQK 279
IQ+
Sbjct: 56 KIQE 59
>Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical
protein F39B2.10 protein.
Length = 402
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 103 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 201
+ TL G+TI V P + I + K+ EG+P
Sbjct: 279 ISTLDGRTIFYRVLPGEVIAHADVKVIHNEGMP 311
>U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical protein
F48E3.3 protein.
Length = 1493
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/52 (21%), Positives = 29/52 (55%)
Frame = +1
Query: 91 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 246
+Q+ + + TGK++ + VE + +E D+EG+ + L+ + ++ ++
Sbjct: 1149 LQVVIDSFTGKSVRVRVEKREGMEERNLLSDDEEGVWSSLSNLVSSKEKTQE 1200
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,821,765
Number of Sequences: 27780
Number of extensions: 213487
Number of successful extensions: 630
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 629
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2412704140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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