Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_D08
(853 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0237 - 1808203-1809159,1809246-1809399,1809488-1809636,180... 91 1e-18
04_03_0092 + 11079185-11079589,11081319-11081409,11081507-110816... 86 3e-17
05_04_0284 - 19813179-19813340,19813464-19813748,19813850-198141... 33 0.29
01_06_1315 + 36226262-36226533,36227946-36228060,36228710-362287... 30 2.0
11_02_0053 - 7797580-7798731 30 2.7
03_06_0244 + 32613914-32614666 29 3.6
07_03_0918 - 22581625-22581687,22581773-22581868,22581980-225822... 29 4.7
07_03_0043 - 12741661-12741816,12741980-12742153,12742870-127429... 29 4.7
05_04_0280 - 19752112-19752451,19754104-19755587 29 4.7
02_01_0206 + 1388149-1388330,1388527-1388629,1388896-1388964,138... 29 4.7
04_01_0110 + 1123238-1123450,1124211-1124997,1126126-1126403 29 6.2
02_01_0420 + 3076493-3076646,3076721-3077704,3078013-3078824 29 6.2
01_01_1125 - 8920590-8924372 29 6.2
03_05_1137 + 30652967-30653183,30653281-30653485,30653696-306537... 28 8.2
02_05_0112 - 25931775-25932078,25932554-25932732,25934033-25935184 28 8.2
02_02_0597 - 11996350-11996483,11997511-11997604,11997877-119980... 28 8.2
>06_01_0237 -
1808203-1809159,1809246-1809399,1809488-1809636,
1809715-1809997,1810087-1810192,1810293-1810383,
1810779-1811270
Length = 743
Score = 90.6 bits (215), Expect = 1e-18
Identities = 65/208 (31%), Positives = 92/208 (44%), Gaps = 12/208 (5%)
Frame = +2
Query: 149 LKDIANKLRIDSIVATNASKSGHPTSCASMAEIMSVLFFHTMRYKISAPRDASADRFILS 328
L+ N +R +I A + SGHP A + +L+ MRY P + DRFILS
Sbjct: 84 LEKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFILS 143
Query: 329 KGHAAPILYAAWAEAGLFPL--DELKNLRKLDSDLEGHPTP-RLNFVDVGTGSLGQGLAV 499
GH + YA AG + ++LK R+ S GHP V+V TG LGQG+A
Sbjct: 144 AGHGCMLQYALLHLAGYDAVLEEDLKQFRQWGSKTPGHPENFETPGVEVTTGPLGQGIAN 203
Query: 500 AAGMAYVGKYF---------DQAPYRVYCLVGDGXAAXGSIXESLHFASHYKLDNLVVIF 652
A G+A K+ + + YC++GDG G E+ A H+ L L+ +
Sbjct: 204 AVGLALAEKHLAARFNKPDSEIVDHYTYCILGDGCQMEGISNEACSLAGHWGLGKLIAFY 263
Query: 653 DVNRLGQSXPTSLQHXLEXYDXRLXAFG 736
D N + T + E R A G
Sbjct: 264 DDNHISIDGDTEIA-FTEDVSARFEALG 290
>04_03_0092 +
11079185-11079589,11081319-11081409,11081507-11081612,
11081694-11081976,11082062-11082210,11083582-11083735,
11083837-11084793
Length = 714
Score = 86.2 bits (204), Expect = 3e-17
Identities = 61/195 (31%), Positives = 90/195 (46%), Gaps = 12/195 (6%)
Frame = +2
Query: 143 EQLKDIANKLRIDSIVATNASKSGHPTSCASMAEIMSVLFFHTMRYKISAPRDASADRFI 322
E ++ N +R ++ + +KSGHP A + VLF +R+ P DRFI
Sbjct: 53 EVVEQSVNTIRFLAVDSVEKAKSGHPGLPMGCAPLGHVLFDEFLRFNPKNPYWFDRDRFI 112
Query: 323 LSKGHAAPILYAAWAEAGL--FPLDELKNLRKLDSDLEGHPTP-RLNFVDVGTGSLGQGL 493
LS GH + YA AG +D+LK R+ S GHP V+V TG LGQG
Sbjct: 113 LSAGHGCMLQYALLHLAGYDSVTMDDLKAFRQWGSRTPGHPENFETPGVEVTTGPLGQGF 172
Query: 494 AVAAGMAYVGKY----FDQAPYRV-----YCLVGDGXAAXGSIXESLHFASHYKLDNLVV 646
A A G+A K+ F++ ++ Y ++GDG G E+ A H+ L L+
Sbjct: 173 ANAVGLALAEKHLAARFNKPDLKIVDHHTYVILGDGCQMEGVSNEASSLAGHWGLGKLIA 232
Query: 647 IFDVNRLGQSXPTSL 691
+D N + T +
Sbjct: 233 FYDDNHISIDGSTGI 247
>05_04_0284 -
19813179-19813340,19813464-19813748,19813850-19814131,
19814224-19814531,19814654-19814927,19815807-19816175,
19816372-19816434,19817495-19817789,19817818-19818008,
19818123-19818428,19818516-19818638
Length = 885
Score = 33.1 bits (72), Expect = 0.29
Identities = 45/198 (22%), Positives = 82/198 (41%), Gaps = 11/198 (5%)
Frame = +2
Query: 128 KNVDFEQLKDIANKLRIDSIVATNASKSGHPTSCASMAEIMSVLF--FHTMRYKI--SAP 295
KN+ ++L+ +A++LR D I + + GH S + E+ L F+T + KI
Sbjct: 83 KNLSLKELQQLADELRSDVIFHVSKT-GGHLGSSLGVVELTVALHYVFNTPQDKILWDVG 141
Query: 296 RDASADRFILSKGHAAPILYAAWAEAGLFPLDELKNLRKLDSDLEGHPTPRLNFVDVGTG 475
+ + + + P + +G E + DS GH + ++
Sbjct: 142 HQSYPHKILTGRRDKMPTMRQTNGLSGFTKRSE----SEYDSFGTGHSSTTISAALGNLL 197
Query: 476 SLGQGLAVA-------AGMAYVGKYFDQAPYRVYCLVGDGXAAXGSIXESLHFASHYKLD 634
Q L + AGMA VG+ V ++GDG G E+++ A + D
Sbjct: 198 FFLQSLCIELPAYVRLAGMA-VGRDLKGGKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSD 256
Query: 635 NLVVIFDVNRLGQSXPTS 688
+V++ D ++ S PT+
Sbjct: 257 MIVILNDNKQV--SLPTA 272
>01_06_1315 +
36226262-36226533,36227946-36228060,36228710-36228752,
36229953-36230329,36230330-36230481,36230591-36230838,
36230919-36231047,36231130-36231739,36231842-36232086,
36232195-36232325
Length = 773
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -2
Query: 621 WLAKCSDSQMLPSA-AXPSPTRQYTL*GAWSKYFPTYAMPAATASPWPREPVPTST 457
+LAKC+ S +LPSA P + AW+ + P +A+P A P P P S+
Sbjct: 159 FLAKCTTSLLLPSATTKPVQKLRPGSRTAWAGH-PKWALPVAYEMPAPPPPHAASS 213
>11_02_0053 - 7797580-7798731
Length = 383
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/34 (50%), Positives = 17/34 (50%)
Frame = -3
Query: 704 PXDVAERWXRTAPDG*HRR*RRGCPACSGWRSAA 603
P DVA P G HR RR C GWRSAA
Sbjct: 28 PDDVAVDCLARVPHGAHRAMRR---VCRGWRSAA 58
>03_06_0244 + 32613914-32614666
Length = 250
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3
Query: 299 PVARRSCTALCGRREQTLSQPLTR 228
PV RR C CGRRE P R
Sbjct: 46 PVMRRRCRRRCGRRESVTGSPRVR 69
>07_03_0918 - 22581625-22581687,22581773-22581868,22581980-22582268,
22582341-22582477,22582567-22582683,22583277-22583440,
22583542-22583756,22583838-22584004,22584206-22584559,
22584647-22584795,22584907-22585030,22585132-22585371,
22585723-22586140,22586297-22586920,22586999-22587183,
22587302-22587412,22587583-22587789,22587869-22587967,
22588063-22588159,22588296-22588384,22588495-22588548,
22588671-22588793,22588872-22588940,22589020-22589089,
22589202-22589260,22589367-22589570,22590032-22590060,
22590375-22590433,22590513-22590634,22591637-22591830,
22591974-22592088
Length = 1680
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = -3
Query: 278 TALCGRREQTLSQPLTRMMSGDRTLRRL*QQYCRFSICWRYLLVVQSQHF 129
TALCG + L Q R+ S + + R + W + V SQHF
Sbjct: 940 TALCGVSAEELKQTPARVFSLQKLVEISYYNMARIRLVWARIWSVLSQHF 989
>07_03_0043 -
12741661-12741816,12741980-12742153,12742870-12742932,
12744107-12744214,12744303-12744418,12745188-12745314,
12746423-12746592,12747409-12747487,12747558-12747669,
12748064-12748154,12748425-12748534,12748536-12748666,
12749557-12749817
Length = 565
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = -2
Query: 288 EILYRIVWKKRTDIISAIDAHDVG*PDFEAFVATILSILNLL 163
++ +R+ + +I+ AID++ G DFE FVA L + L+
Sbjct: 440 DVPWRLKGPRVLEIVEAIDSNTDGLVDFEEFVAATLHVHQLV 481
>05_04_0280 - 19752112-19752451,19754104-19755587
Length = 607
Score = 29.1 bits (62), Expect = 4.7
Identities = 26/97 (26%), Positives = 39/97 (40%), Gaps = 4/97 (4%)
Frame = -1
Query: 571 VAHQAIHPVGRLVEVLPDVCHAGRHGEPLAQ-GAGADVHEVKS--RGGXXXXXXXXXXXX 401
+ ++A GR+ E +C G+HG + G GADV E GG
Sbjct: 463 IMYKAYVSSGRMAEANTILCMMGKHGFGFPRGGTGADVEEASDGIGGGDVSGVRDSPVLG 522
Query: 400 XXXXXREQPGLRP-RRVQDRRCVTLGKNKSVGGSVPW 293
P LR RR Q +R L + + +G ++ W
Sbjct: 523 VDSSEVAAPYLRQCRRSQRQRRWRLVEGEVMGMALTW 559
>02_01_0206 +
1388149-1388330,1388527-1388629,1388896-1388964,
1389684-1389803,1390352-1390482,1390840-1390881,
1390961-1391138,1391241-1391319,1391441-1391610,
1392503-1392629,1392731-1392846,1392926-1393033,
1393118-1393180,1393283-1393456,1393814-1393978
Length = 608
Score = 29.1 bits (62), Expect = 4.7
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Frame = -2
Query: 318 NLSAEASRGA---EILYRIVWKKRTDIISAIDAHDVG*PDFEAFVATILSI 175
++S E R A ++ +R+ + +II AID++ G DFE FVA L I
Sbjct: 467 SISIEEMRHALAKDLPWRLKGPRVLEIIQAIDSNTDGLVDFEEFVAATLHI 517
>04_01_0110 + 1123238-1123450,1124211-1124997,1126126-1126403
Length = 425
Score = 28.7 bits (61), Expect = 6.2
Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 8/69 (11%)
Frame = +2
Query: 467 GTGSLGQGLAVAAGMAYVGKYFDQAPYR--------VYCLVGDGXAAXGSIXESLHFASH 622
G +G+G+ VA G A+ KY + + GDG G E L+ A
Sbjct: 182 GFAFIGEGIPVATGAAFAAKYRHEVLKQSSPDGLDVTLAFFGDGTCNNGQFFECLNMAQL 241
Query: 623 YKLDNLVVI 649
+KL + V+
Sbjct: 242 WKLPIVFVV 250
>02_01_0420 + 3076493-3076646,3076721-3077704,3078013-3078824
Length = 649
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -1
Query: 625 VVAGEVQRLXDAAXGRLSVAHQAIHPVGRLVEVLPDVCHAGRHGE 491
+V G+ L DA G ++ +H GRL+E + V HGE
Sbjct: 520 IVTGKKAMLNDAQFGHITDWVWHLHQRGRLLEAVDGVLGTAGHGE 564
>01_01_1125 - 8920590-8924372
Length = 1260
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -2
Query: 522 PTYAMPAATASPWPREPVPTSTKLSRGV 439
P AMP A P P P+P+ KL R V
Sbjct: 167 PPSAMPLAGGEPRPPPPLPSLVKLGRAV 194
>03_05_1137 +
30652967-30653183,30653281-30653485,30653696-30653786,
30653904-30654046,30654186-30654429,30654536-30654640,
30654985-30655167,30655255-30655459,30655552-30656036
Length = 625
Score = 28.3 bits (60), Expect = 8.2
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +3
Query: 399 RTCASWTRTWRATPPRDLTSWTS 467
R C WT TW+ P ++T+ T+
Sbjct: 445 RQCGGWTITWQGQPGNNITAGTT 467
>02_05_0112 - 25931775-25932078,25932554-25932732,25934033-25935184
Length = 544
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +3
Query: 432 ATPPRDLTSWTSAPAPW 482
A PPR SW +PAPW
Sbjct: 261 AFPPRRPNSWAPSPAPW 277
>02_02_0597 -
11996350-11996483,11997511-11997604,11997877-11998032,
11998580-11998639,11998733-11998951,11999038-11999377,
12001240-12001571
Length = 444
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +2
Query: 218 PTSCASMAEIMSVLFFHTMRYKISAPRDASADRFILSKGHAAPILYAAWAEA 373
PT +MA + +RYKISA D R +L H P ++ + A
Sbjct: 30 PTRGGAMAAAGDKMSIRAVRYKISASVDDRGPRPVLPLAHGDPSVFPEFRTA 81
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,701,066
Number of Sequences: 37544
Number of extensions: 376888
Number of successful extensions: 1373
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1318
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1365
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -