Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_D08
         (853 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81055-1|CAB02889.1|  618|Caenorhabditis elegans Hypothetical pr...   280   8e-76
U12965-7|AAY86205.1|  528|Caenorhabditis elegans Hypothetical pr...    31   1.0  
U12965-9|AAA20605.3|  522|Caenorhabditis elegans Hypothetical pr...    29   5.5  
AF036692-6|AAB88328.1|  397|Caenorhabditis elegans Hypothetical ...    28   9.7  

>Z81055-1|CAB02889.1|  618|Caenorhabditis elegans Hypothetical
           protein F01G10.1 protein.
          Length = 618

 Score =  280 bits (687), Expect = 8e-76
 Identities = 132/200 (66%), Positives = 156/200 (78%)
 Frame = +2

Query: 149 LKDIANKLRIDSIVATNASKSGHPTSCASMAEIMSVLFFHTMRYKISAPRDASADRFILS 328
           L+D AN++RI SI  T ASKSGHPTS  S AEIMS LFF  M+Y ++ P+ ASADRF+LS
Sbjct: 11  LEDAANRMRISSIEMTCASKSGHPTSSTSAAEIMSTLFFSEMKYDVAEPKSASADRFVLS 70

Query: 329 KGHAAPILYAAWAEAGLFPLDELKNLRKLDSDLEGHPTPRLNFVDVGTGSLGQGLAVAAG 508
           KGHA PILYAAW EAGL   +++ +LRK+DSD+EGHPTPRLNF+DV TGSLGQGL VA G
Sbjct: 71  KGHACPILYAAWEEAGLLSHEQVLSLRKIDSDIEGHPTPRLNFIDVATGSLGQGLGVATG 130

Query: 509 MAYVGKYFDQAPYRVYCLVGDGXAAXGSIXESLHFASHYKLDNLVVIFDVNRLGQSXPTS 688
           MAYVGKY D+A YRV+CL+GDG +A GS+ E+  FAS YKLDNLV I DVNRLGQS  TS
Sbjct: 131 MAYVGKYIDKASYRVFCLLGDGESAEGSVWEAAAFASIYKLDNLVAIVDVNRLGQSQATS 190

Query: 689 LQHXLEXYDXRLXAFGLXSL 748
           L H +E Y  R  AFG  ++
Sbjct: 191 LGHDVETYKARFAAFGFNAI 210


>U12965-7|AAY86205.1|  528|Caenorhabditis elegans Hypothetical
           protein F23F12.13 protein.
          Length = 528

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = +2

Query: 425 LEGHPTPRLNFVDVGTGSL--GQGLAVAAGMAYVGKYFDQAPYRVYCLVG 568
           +E  PT ++  + +GT SL    G  +A  MAY+   +  APY V C +G
Sbjct: 416 VECFPT-KIRTIGIGTCSLLARTGALLAPQMAYLSDIYRPAPYAVVCSIG 464


>U12965-9|AAA20605.3|  522|Caenorhabditis elegans Hypothetical
           protein F23F12.3 protein.
          Length = 522

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = +2

Query: 437 PTPRLNFVDVGTGSLGQ--GLAVAAGMAYVGKYFDQAPYRVYCLVG 568
           PT R+  + +GT SL    G  +A  MAY+ + +   PY + C +G
Sbjct: 432 PT-RIRTIGIGTCSLLARIGALLAPQMAYLSEIYPPIPYIIVCSIG 476


>AF036692-6|AAB88328.1|  397|Caenorhabditis elegans Hypothetical
           protein C44B12.5 protein.
          Length = 397

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 16/45 (35%), Positives = 18/45 (40%), Gaps = 3/45 (6%)
 Frame = +3

Query: 387 WTS*RTCASWTRTWRATPPRDLTSWTSAPA---PWARGSPWRPAW 512
           W S  T  S   +W A P    TSW +APA    W       P W
Sbjct: 334 WQSENTAPS--TSWGAAPAAPSTSWGAAPAAPPTWGGAPTAAPTW 376


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,869,221
Number of Sequences: 27780
Number of extensions: 288798
Number of successful extensions: 886
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 886
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)