Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_D06
(898 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 239 2e-63
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 239 2e-63
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 239 2e-63
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 239 2e-63
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 239 2e-63
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 239 2e-63
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 238 4e-63
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 236 1e-62
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 232 2e-61
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 200 8e-52
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 186 1e-47
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 186 1e-47
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 185 3e-47
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 180 2e-45
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 146 2e-35
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 128 7e-30
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 96 3e-20
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 82 5e-16
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 48 7e-06
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 47 2e-05
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 47 2e-05
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 33 0.28
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 31 1.1
U41278-7|AAT81193.1| 680|Caenorhabditis elegans Hypothetical pr... 30 2.6
U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z83232-3|CAE46672.1| 381|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z83232-2|CAB05754.2| 420|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z81122-5|CAB03357.1| 579|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z71262-12|CAA95808.1| 545|Caenorhabditis elegans Hypothetical p... 28 7.9
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 239 bits (585), Expect = 2e-63
Identities = 108/109 (99%), Positives = 109/109 (100%)
Frame = +3
Query: 159 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 338
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 339 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 485
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 109
Score = 79.0 bits (186), Expect = 4e-15
Identities = 37/43 (86%), Positives = 38/43 (88%)
Frame = +1
Query: 487 PLNPKANREXMTQIMFETFXTPAMYVXIXAVLSLYASGRTXGI 615
PLNPKANRE MTQIMFETF TPAMYV I AVLSLYASGRT G+
Sbjct: 110 PLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGV 152
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 239 bits (585), Expect = 2e-63
Identities = 108/109 (99%), Positives = 109/109 (100%)
Frame = +3
Query: 159 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 338
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 339 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 485
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 109
Score = 79.0 bits (186), Expect = 4e-15
Identities = 37/43 (86%), Positives = 38/43 (88%)
Frame = +1
Query: 487 PLNPKANREXMTQIMFETFXTPAMYVXIXAVLSLYASGRTXGI 615
PLNPKANRE MTQIMFETF TPAMYV I AVLSLYASGRT G+
Sbjct: 110 PLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGV 152
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 239 bits (585), Expect = 2e-63
Identities = 108/109 (99%), Positives = 109/109 (100%)
Frame = +3
Query: 159 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 338
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 339 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 485
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 109
Score = 79.0 bits (186), Expect = 4e-15
Identities = 37/43 (86%), Positives = 38/43 (88%)
Frame = +1
Query: 487 PLNPKANREXMTQIMFETFXTPAMYVXIXAVLSLYASGRTXGI 615
PLNPKANRE MTQIMFETF TPAMYV I AVLSLYASGRT G+
Sbjct: 110 PLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGV 152
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 239 bits (585), Expect = 2e-63
Identities = 108/109 (99%), Positives = 109/109 (100%)
Frame = +3
Query: 159 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 338
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 339 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 485
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 109
Score = 79.0 bits (186), Expect = 4e-15
Identities = 37/43 (86%), Positives = 38/43 (88%)
Frame = +1
Query: 487 PLNPKANREXMTQIMFETFXTPAMYVXIXAVLSLYASGRTXGI 615
PLNPKANRE MTQIMFETF TPAMYV I AVLSLYASGRT G+
Sbjct: 110 PLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGV 152
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 239 bits (585), Expect = 2e-63
Identities = 108/109 (99%), Positives = 109/109 (100%)
Frame = +3
Query: 159 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 338
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 339 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 485
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 109
Score = 79.0 bits (186), Expect = 4e-15
Identities = 37/43 (86%), Positives = 38/43 (88%)
Frame = +1
Query: 487 PLNPKANREXMTQIMFETFXTPAMYVXIXAVLSLYASGRTXGI 615
PLNPKANRE MTQIMFETF TPAMYV I AVLSLYASGRT G+
Sbjct: 110 PLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGV 152
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 239 bits (585), Expect = 2e-63
Identities = 108/109 (99%), Positives = 109/109 (100%)
Frame = +3
Query: 159 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 338
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 339 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 485
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 109
Score = 79.0 bits (186), Expect = 4e-15
Identities = 37/43 (86%), Positives = 38/43 (88%)
Frame = +1
Query: 487 PLNPKANREXMTQIMFETFXTPAMYVXIXAVLSLYASGRTXGI 615
PLNPKANRE MTQIMFETF TPAMYV I AVLSLYASGRT G+
Sbjct: 110 PLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGV 152
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 238 bits (582), Expect = 4e-63
Identities = 107/109 (98%), Positives = 109/109 (100%)
Frame = +3
Query: 159 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 338
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 339 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 485
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 109
Score = 79.4 bits (187), Expect = 3e-15
Identities = 38/43 (88%), Positives = 38/43 (88%)
Frame = +1
Query: 487 PLNPKANREXMTQIMFETFXTPAMYVXIXAVLSLYASGRTXGI 615
PLNPKANRE MTQIMFETF TPAMYV I AVLSLYASGRT GI
Sbjct: 110 PLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGI 152
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 236 bits (578), Expect = 1e-62
Identities = 105/109 (96%), Positives = 109/109 (100%)
Frame = +3
Query: 159 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 338
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 339 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 485
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 109
Score = 79.4 bits (187), Expect = 3e-15
Identities = 38/43 (88%), Positives = 38/43 (88%)
Frame = +1
Query: 487 PLNPKANREXMTQIMFETFXTPAMYVXIXAVLSLYASGRTXGI 615
PLNPKANRE MTQIMFETF TPAMYV I AVLSLYASGRT GI
Sbjct: 110 PLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGI 152
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 232 bits (568), Expect = 2e-61
Identities = 104/107 (97%), Positives = 107/107 (100%)
Frame = +3
Query: 165 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 344
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 345 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 485
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTEA
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEA 108
Score = 78.2 bits (184), Expect = 7e-15
Identities = 37/43 (86%), Positives = 38/43 (88%)
Frame = +1
Query: 487 PLNPKANREXMTQIMFETFXTPAMYVXIXAVLSLYASGRTXGI 615
PLNPK+NRE MTQIMFETF TPAMYV I AVLSLYASGRT GI
Sbjct: 109 PLNPKSNREKMTQIMFETFNTPAMYVNIQAVLSLYASGRTTGI 151
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 200 bits (489), Expect = 8e-52
Identities = 90/91 (98%), Positives = 91/91 (100%)
Frame = +3
Query: 213 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 392
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 393 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 485
NWDDMEKIWHHTFYNELRVAPEEHPVLLTEA
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 95
Score = 79.0 bits (186), Expect = 4e-15
Identities = 37/43 (86%), Positives = 38/43 (88%)
Frame = +1
Query: 487 PLNPKANREXMTQIMFETFXTPAMYVXIXAVLSLYASGRTXGI 615
PLNPKANRE MTQIMFETF TPAMYV I AVLSLYASGRT G+
Sbjct: 96 PLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGV 138
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 186 bits (454), Expect = 1e-47
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +3
Query: 159 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 338
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 339 SKRGILTLKYPIEHGIVTNWDDMEKI 416
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 186 bits (454), Expect = 1e-47
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +3
Query: 159 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 338
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 339 SKRGILTLKYPIEHGIVTNWDDMEKI 416
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 185 bits (451), Expect = 3e-47
Identities = 84/86 (97%), Positives = 86/86 (100%)
Frame = +3
Query: 159 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 338
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 339 SKRGILTLKYPIEHGIVTNWDDMEKI 416
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 180 bits (437), Expect = 2e-45
Identities = 81/83 (97%), Positives = 83/83 (100%)
Frame = +3
Query: 159 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 338
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 339 SKRGILTLKYPIEHGIVTNWDDM 407
SKRGILTLKYPIEHGIVTNWDDM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDM 83
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 146 bits (354), Expect = 2e-35
Identities = 65/65 (100%), Positives = 65/65 (100%)
Frame = +3
Query: 291 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 470
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 471 LLTEA 485
LLTEA
Sbjct: 61 LLTEA 65
Score = 79.0 bits (186), Expect = 4e-15
Identities = 37/43 (86%), Positives = 38/43 (88%)
Frame = +1
Query: 487 PLNPKANREXMTQIMFETFXTPAMYVXIXAVLSLYASGRTXGI 615
PLNPKANRE MTQIMFETF TPAMYV I AVLSLYASGRT G+
Sbjct: 66 PLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGV 108
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 128 bits (308), Expect = 7e-30
Identities = 54/102 (52%), Positives = 77/102 (75%), Gaps = 1/102 (0%)
Frame = +3
Query: 183 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 362
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A+S RG+ ++
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSI 70
Query: 363 KYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEA 485
+YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+A
Sbjct: 71 EYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDA 112
Score = 60.5 bits (140), Expect = 2e-09
Identities = 26/43 (60%), Positives = 32/43 (74%)
Frame = +1
Query: 487 PLNPKANREXMTQIMFETFXTPAMYVXIXAVLSLYASGRTXGI 615
PLNP NRE +I FETF PA+Y+ + AVLSLYA+GRT G+
Sbjct: 113 PLNPLKNRERSAEIFFETFNVPALYIQMQAVLSLYATGRTTGV 155
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 96.3 bits (229), Expect = 3e-20
Identities = 49/103 (47%), Positives = 67/103 (65%), Gaps = 3/103 (2%)
Frame = +3
Query: 183 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM-VGMGQ-KDSYVGDEAQSKRGIL 356
+VVDNG+G K G+AG + P +FPS+VGRP + VG + KD VG+E R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 357 TLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTE 482
+ YP+++GIV NWDDM +W HTF E L + P+E +LLTE
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTE 111
Score = 51.6 bits (118), Expect = 7e-07
Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
Frame = +1
Query: 466 QSCSLRL---PLNPKANREXMTQIMFETFXTPAMYVXIXAVLSLYASGRTXGI 615
+ C L L PLNP +NRE M Q+MFE + ++YV + AVL+LYA G G+
Sbjct: 103 KECKLLLTEPPLNPNSNREKMFQVMFEQYGFNSIYVAVQAVLTLYAQGLLTGV 155
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 82.2 bits (194), Expect = 5e-16
Identities = 47/121 (38%), Positives = 63/121 (52%), Gaps = 13/121 (10%)
Frame = +3
Query: 159 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGM 302
M ++ A V+DNG+G K G+AG+ P+ + PS V Q V G+
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60
Query: 303 GQKDSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 479
D ++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H LLT
Sbjct: 61 DDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLT 120
Query: 480 E 482
E
Sbjct: 121 E 121
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +1
Query: 487 PLNPKANREXMTQIMFETFXTPAMYVXIXAVLSLYAS 597
PLN NRE +IMFE+F P +Y+ + AVL+L AS
Sbjct: 123 PLNTPENREYTAEIMFESFNVPGLYIAVQAVLALTAS 159
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 48.4 bits (110), Expect = 7e-06
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 17/123 (13%)
Frame = +3
Query: 168 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA--QS 341
+EV+ LV D GS + GFAG++ P+ PS + Q+ GD + Q+
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQT 68
Query: 342 KR------GILTLKYP---------IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 476
KR G + P ++ G++ +W+ EKI H++ N L P EHPVL
Sbjct: 69 KREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLF 128
Query: 477 TEA 485
+E+
Sbjct: 129 SES 131
Score = 47.2 bits (107), Expect = 2e-05
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = +1
Query: 493 NPKANREXMTQIMFETFXTPAMYVXIXAVLSLYASGRTXGI 615
N +A RE +T+IMFE F PA Y+ VLS +A GRT G+
Sbjct: 134 NDRARREKLTEIMFEKFQVPAYYLSKNVVLSCFAQGRTHGL 174
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 47.2 bits (107), Expect = 2e-05
Identities = 27/86 (31%), Positives = 43/86 (50%)
Frame = +3
Query: 174 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 353
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 354 LTLKYPIEHGIVTNWDDMEKIWHHTF 431
++ PIE G V NWD ++IW TF
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF 82
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 47.2 bits (107), Expect = 2e-05
Identities = 27/86 (31%), Positives = 43/86 (50%)
Frame = +3
Query: 174 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 353
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 354 LTLKYPIEHGIVTNWDDMEKIWHHTF 431
++ PIE G V NWD ++IW TF
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF 82
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 33.1 bits (72), Expect = 0.28
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 1/109 (0%)
Frame = -1
Query: 487 GASVSRTGCSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCASSPT*ESF 308
GA S G SS S+ I + ++ T+ S PL++ +SS S
Sbjct: 424 GAPSSTLGSSSSTIVSTT------ITPSTPKVSTLTLSQSPTPTSTPLVVSSSSSGSSST 477
Query: 307 CPIPTITP*WRGLPTIEGN-TARGASSPAKPALHIPEPLSTTNAATSSS 164
TITP +G+PT N S+P P + STT A +++S
Sbjct: 478 VVTSTITPSTQGVPTSTSNQPTPSTSNPTTPKSTVTASPSTTGATSTAS 526
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 31.1 bits (67), Expect = 1.1
Identities = 25/74 (33%), Positives = 28/74 (37%)
Frame = +2
Query: 254 PLDRGKAPPSGRDGRYGTEGLLCRR*GTEQKRYPDPQIPHRTRNRH*LG*HGEDLASYLL 433
P G A P+G DG GT G + YP+P P G G D AS
Sbjct: 189 PGPSGPAGPAGNDGAAGTPG---PDGPAGESTYPEPAAPGPAGPPGPAGPPGPDGASPTA 245
Query: 434 Q*AACRPRGTPSPA 475
A P G P PA
Sbjct: 246 APGAAGPPGPPGPA 259
>U41278-7|AAT81193.1| 680|Caenorhabditis elegans Hypothetical
protein F33G12.6b protein.
Length = 680
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -2
Query: 345 FCSVPHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEH-HLLRNRPCTYRSHCL 190
FC + H++ + P R D +RG +++H RNRPC C+
Sbjct: 393 FCVIKKSEHENKENAHLPPREDRTLDVTTRGGEKDKHSEYARNRPCAASLPCV 445
>U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical
protein F33G12.6a protein.
Length = 771
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -2
Query: 345 FCSVPHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEH-HLLRNRPCTYRSHCL 190
FC + H++ + P R D +RG +++H RNRPC C+
Sbjct: 393 FCVIKKSEHENKENAHLPPREDRTLDVTTRGGEKDKHSEYARNRPCAASLPCV 445
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 29.5 bits (63), Expect = 3.4
Identities = 24/70 (34%), Positives = 27/70 (38%)
Frame = +2
Query: 266 GKAPPSGRDGRYGTEGLLCRR*GTEQKRYPDPQIPHRTRNRH*LG*HGEDLASYLLQ*AA 445
G A P+G DG GT G + YP+P P G G D AS A
Sbjct: 194 GPAGPAGNDGAAGTPG---PDGPAGESTYPEPAGPGPAGPPGPAGPPGPDGASPTAAPGA 250
Query: 446 CRPRGTPSPA 475
P G P PA
Sbjct: 251 AGPPGPPGPA 260
>Z83232-3|CAE46672.1| 381|Caenorhabditis elegans Hypothetical
protein K04B12.2b protein.
Length = 381
Score = 29.1 bits (62), Expect = 4.5
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +1
Query: 391 LTGMTWRRFG-IIPSTMSCVSPPRNTQSCSLRLPLNPKANREXMTQIMFETF-XTPAM 558
+T + W+R I P + PP +P ANRE + Q+M E F TPA+
Sbjct: 252 ITPIKWQRVTPIFPENTKNIQPPDERIEEDEAEEEDPLANREIVEQLMHEYFIPTPAL 309
>Z83232-2|CAB05754.2| 420|Caenorhabditis elegans Hypothetical
protein K04B12.2a protein.
Length = 420
Score = 29.1 bits (62), Expect = 4.5
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +1
Query: 391 LTGMTWRRFG-IIPSTMSCVSPPRNTQSCSLRLPLNPKANREXMTQIMFETF-XTPAM 558
+T + W+R I P + PP +P ANRE + Q+M E F TPA+
Sbjct: 291 ITPIKWQRVTPIFPENTKNIQPPDERIEEDEAEEEDPLANREIVEQLMHEYFIPTPAL 348
>Z81122-5|CAB03357.1| 579|Caenorhabditis elegans Hypothetical
protein T13F2.6 protein.
Length = 579
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 47 IPRSELGSLRCTAITKLCNSKLIYLFIIE 133
+P+ E+G L CT I C ++ I+ F IE
Sbjct: 156 LPKREIGRLLCTVIAVQCPTEKIWKFRIE 184
>Z71262-12|CAA95808.1| 545|Caenorhabditis elegans Hypothetical
protein F22D6.3a protein.
Length = 545
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 26 GNSLRFLIPRSELGSLRCTAITKLCNS 106
G SL FL+ R G L+C KLC S
Sbjct: 137 GKSLMFLVLRDGYGFLQCVLNDKLCQS 163
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,697,048
Number of Sequences: 27780
Number of extensions: 331117
Number of successful extensions: 1065
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1060
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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