Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_D04
         (901 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   5.0  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   5.0  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   5.0  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        22   6.6  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -3

Query: 275 LVSSIQLVVLESTYCPSIYSFVVGAELLYERRSTSWDS 162
           ++S+   V L ++   SIYSF+    L++   S  W S
Sbjct: 461 ILSAAYNVELHNSSPFSIYSFLERLNLIFMSSSLQWSS 498


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -3

Query: 275 LVSSIQLVVLESTYCPSIYSFVVGAELLYERRSTSWDS 162
           ++S+   V L ++   SIYSF+    L++   S  W S
Sbjct: 499 ILSAAYNVELHNSSPFSIYSFLERLNLIFMSSSLQWSS 536


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 7/21 (33%), Positives = 10/21 (47%)
 Frame = +2

Query: 626 VVGGVAXFNFPVMIPLWMFPP 688
           VV       +P ++P W  PP
Sbjct: 471 VVAAALTGTYPTLLPQWCLPP 491


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -1

Query: 715 YTRVSGHQRWREHPQWDHHR 656
           Y ++S     REHP WD  R
Sbjct: 161 YKKLSVEVVRREHPFWDDQR 180


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,188
Number of Sequences: 438
Number of extensions: 4756
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29146299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)