Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_C24
(895 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1711.13 |his2||histidinol dehydrogenase His2 |Schizosaccharo... 30 0.39
SPCC1672.06c |asp1|vip1|inositol hexakisphosphate kinase/inosito... 28 1.6
SPAC688.06c |slx4||structure-specific endonuclease subunit |Schi... 27 3.6
SPBC26H8.03 |cho2||phosphatidylethanolamine N-methyltransferase ... 27 4.8
SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces po... 26 6.3
SPBC2A9.06c |||di-trans,poly-cis-decaprenylcistransferase|Schizo... 26 8.3
SPAC458.06 |||phosphoinositide binding protein|Schizosaccharomyc... 26 8.3
SPBC428.07 |meu6||meiotic chromosome segregation protein Meu6|Sc... 26 8.3
SPAC1071.10c |pma1||P-type proton ATPase Pma1 |Schizosaccharomyc... 26 8.3
>SPBC1711.13 |his2||histidinol dehydrogenase His2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 30.3 bits (65), Expect = 0.39
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +2
Query: 272 VVDYAKKKSYEDLLRQAQDSTTDDDLLRVSEEMFNADINNAFNYI 406
++DYA K L + DDDL+++S M DI+ AFN I
Sbjct: 54 LIDYASKFEKVQLKSAVLKAPFDDDLMKIS-PMIKEDIDIAFNNI 97
>SPCC1672.06c |asp1|vip1|inositol hexakisphosphate kinase/inositol
pyrophosphate synthase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 920
Score = 28.3 bits (60), Expect = 1.6
Identities = 21/90 (23%), Positives = 36/90 (40%)
Frame = +2
Query: 323 QDSTTDDDLLRVSEEMFNADINNAFNYIQVNLQGKTTPMSRNDEAQSNLLXVPENVWSGP 502
+ T DLL+V +++ D +NA ++ + R + PEN+
Sbjct: 550 EQETIPSDLLKVRKDLL--DDSNAAKDTMDKVKKHLKSLLRVGDTARKEFTWPENMPKPC 607
Query: 503 TIRPFVALFDNYHKNVIRPEFVTPNEETEQ 592
+ V YH+ V+R F+ E EQ
Sbjct: 608 EVMQQVVQLMKYHRAVMRENFIILGPEVEQ 637
>SPAC688.06c |slx4||structure-specific endonuclease subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 419
Score = 27.1 bits (57), Expect = 3.6
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +1
Query: 493 ERTNNKTFCCTIRQLSQECDQTRVCYAE*RNGTNH-LHQH 609
+R + T CC IR ++ +CD N T H +H+H
Sbjct: 39 KRKRSVTECCEIRLITSKCDFESTQQLVHHNCTGHKVHEH 78
>SPBC26H8.03 |cho2||phosphatidylethanolamine N-methyltransferase
Cho2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 905
Score = 26.6 bits (56), Expect = 4.8
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = -1
Query: 337 GRRILCLAQQIFVALLLRI-VNDATDNCAYLLESVLSCVPLLTSHMIANQVGKDVVEDLA 161
G+ ++ + FV + D + AYLL+S+ C P +T H + D+ E A
Sbjct: 795 GKHLVMAKTEPFVITATSMNTTDVDEVSAYLLKSIKFCDPNITPH-DGDASLCDISEGSA 853
Query: 160 RSLGYVISVTY 128
R L +I ++
Sbjct: 854 RKLTSIIKYSF 864
>SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 665
Score = 26.2 bits (55), Expect = 6.3
Identities = 18/90 (20%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
Frame = +2
Query: 362 EEMFNADINNAFNYIQVNLQGKTTPMSRNDEAQSNLLXVPENVWSGPTI-RPFVALFDNY 538
E+ F D + N I Q + P + + + L P + + F F+N
Sbjct: 178 EDDFEIDPDTDLNSILHRKQNRMDPKASFSSVEQSSLRTPSSAHNDDGFWDDFDIDFNNE 237
Query: 539 HKNVIRPEFVTPNEETEQTTYINTILATGP 628
+++ R + +PN ++ YI++ ++ P
Sbjct: 238 TESIFRKKIRSPNTINQKHPYISSTISYQP 267
>SPBC2A9.06c |||di-trans,
poly-cis-decaprenylcistransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 258
Score = 25.8 bits (54), Expect = 8.3
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = -1
Query: 268 TDNCAYLLESVLSCVPLLTSHMIANQVGKDVVEDLARSL 152
T+ C+ ++ CV L H+IA + G+D + DL R L
Sbjct: 135 TNPCSPDEKNQNDCVDLKV-HLIAKEDGRDAIIDLTRGL 172
>SPAC458.06 |||phosphoinositide binding protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 364
Score = 25.8 bits (54), Expect = 8.3
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -3
Query: 128 PPRKTTKINVIFIFD*CV*SSAVPAH*SNL 39
P RK ++ ++F+F + +S VPAH S +
Sbjct: 149 PSRKVGQLQILFLFKDHMNTSIVPAHDSEI 178
>SPBC428.07 |meu6||meiotic chromosome segregation protein
Meu6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 651
Score = 25.8 bits (54), Expect = 8.3
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = -1
Query: 718 PNLSQQLNLFGILIQLSNAFVD*ESNEAPDGSRSKNSVDVSGLFRFF 578
P+ S+ F L LSN +S+ G + NSV GLF FF
Sbjct: 292 PSASETFRYF--LPMLSNGRDAKKSSSKSHGGKQNNSVAKDGLFDFF 336
>SPAC1071.10c |pma1||P-type proton ATPase Pma1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 919
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 320 AQDSTTDDDLLRVSEEMFNADI 385
AQD DDD+ + EE+F+ D+
Sbjct: 33 AQDDEPDDDIDALIEELFSEDV 54
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,931,670
Number of Sequences: 5004
Number of extensions: 57049
Number of successful extensions: 186
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 186
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 450492750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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