Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_C24
         (895 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41543-6|AAB37023.1| 2018|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z70206-2|CAA94126.2|  771|Caenorhabditis elegans Hypothetical pr...    29   3.4  
AC024777-5|AAF60564.1|  506|Caenorhabditis elegans Hypothetical ...    29   3.4  
U58758-12|AAB93432.1|  392|Caenorhabditis elegans Hypothetical p...    29   4.5  

>U41543-6|AAB37023.1| 2018|Caenorhabditis elegans Hypothetical
           protein F46H5.4 protein.
          Length = 2018

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 21/89 (23%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
 Frame = +2

Query: 299 YEDLLRQAQDSTTDDDLLRVSEEM--FNADIN-NAFNY-IQVNLQGKTTPMSRNDEAQSN 466
           +   +RQ  D T+D+D+ R+  EM   N  ++   FN+ +++ L G            + 
Sbjct: 505 FSSFIRQEGDKTSDEDIYRICSEMRRTNGKVHKKMFNFELELTLAGSNKSKEYQSHGSNL 564

Query: 467 LLXVPENVWSGPTIRPFVALFDNYHKNVI 553
            L     +     I  + A  +  +KNVI
Sbjct: 565 TLNSERVIHEAMEIPIYQASLNKSYKNVI 593


>Z70206-2|CAA94126.2|  771|Caenorhabditis elegans Hypothetical
           protein C49F8.2 protein.
          Length = 771

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 6/71 (8%)
 Frame = +2

Query: 500 PTIRPFVALFDNYHKNVIRPEFVTPNEETEQTTYINTILATGPI------RSLITFLVNK 661
           PT    VALFDN H+    PE+   N       +++  LA  P       R  +   V+ 
Sbjct: 327 PTRSKSVALFDNKHQMSSIPEYSMLNTNLANLEHLDLELANSPCTTVRAQRRRVISKVSM 386

Query: 662 GITQLNEYPEQ 694
            + Q+NE  ++
Sbjct: 387 SVDQINELEDE 397


>AC024777-5|AAF60564.1|  506|Caenorhabditis elegans Hypothetical
           protein Y42H9AR.1 protein.
          Length = 506

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 16/52 (30%), Positives = 25/52 (48%)
 Frame = +2

Query: 533 NYHKNVIRPEFVTPNEETEQTTYINTILATGPIRSLITFLVNKGITQLNEYP 688
           +Y  + + P F   +  T  T+Y+N I    P+   +  L + GITQL   P
Sbjct: 426 SYVPSAVPPMFSATSAPTPPTSYVNPIPPPAPLNFPMPSLSSIGITQLATPP 477


>U58758-12|AAB93432.1|  392|Caenorhabditis elegans Hypothetical
           protein ZK1127.10 protein.
          Length = 392

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = +2

Query: 518 VALFDNYHKNVIRPEFVTPNEETEQTTYINTILATGPIRSLIT-FLVNKGITQLN 679
           +  + N H +V+    +T N+E +Q  +    LA G + S    FLVN+G+  L+
Sbjct: 201 ITKYINGHSDVVMGAVITDNDEFQQHLFFMQ-LAVGAVPSPFDCFLVNRGLKTLH 254


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,317,037
Number of Sequences: 27780
Number of extensions: 325672
Number of successful extensions: 859
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 859
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)