Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_C19
         (867 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0529 + 10276063-10277439                                        155   6e-38
12_01_1062 - 10966940-10967140,10967314-10967413,10968069-109681...    44   2e-04
10_08_0789 + 20569738-20570207,20573425-20573464,20573484-205735...    29   4.8  
10_01_0147 - 1722947-1723168,1723268-1723464,1723654-1723690,172...    28   8.4  
06_01_1096 - 8988463-8989167,8989335-8989361,8989560-8989648,898...    28   8.4  

>09_02_0529 + 10276063-10277439
          Length = 458

 Score =  155 bits (375), Expect = 6e-38
 Identities = 71/123 (57%), Positives = 90/123 (73%)
 Frame = +2

Query: 485 KKLYLLQXATESNNISVKGVGRFYAPRKKHVITTQIEHKCVLDSCRALXGEGFXITYLPV 664
           ++++    ATE NNI+VKGV RFY  R++HV+TTQ EHKCVLDSCR L  EGF +TYLPV
Sbjct: 120 REIFFTSGATECNNIAVKGVMRFYRDRRRHVVTTQTEHKCVLDSCRYLQQEGFEVTYLPV 179

Query: 665 QQNGIINLKDLEDAITPETXLVSIMTVNNEIXVXXPIEXIGXICXXXKXFFHTDAAQXVG 844
           + +G++++  L DAI P+T LVS+M VNNEI V  P+E IG IC      FHTDAAQ +G
Sbjct: 180 RPDGLVDVAQLADAIRPDTGLVSVMAVNNEIGVVQPLEEIGRICKEKGVPFHTDAAQALG 239

Query: 845 KGP 853
           K P
Sbjct: 240 KIP 242



 Score =  117 bits (281), Expect = 1e-26
 Identities = 50/70 (71%), Positives = 61/70 (87%)
 Frame = +1

Query: 295 GRPLYFDAQATTPMDPRVLDVMLPYLVSYHGNPHSRTHAYGWESEAAVEKAREQVANLIN 474
           GRPLY D QATTP+DPRVLD MLP+ +S +GNPHSRTH YGWES+AAVE+AR +VA+L+ 
Sbjct: 57  GRPLYMDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLYGWESDAAVEEARARVASLVG 116

Query: 475 AEPKEIIFTS 504
           A+P+EI FTS
Sbjct: 117 ADPREIFFTS 126


>12_01_1062 -
           10966940-10967140,10967314-10967413,10968069-10968132,
           10968301-10968373,10968467-10968612,10969625-10969667,
           10969712-10969902,10970706-10970892,10971225-10971384,
           10971483-10971616,10972525-10972530
          Length = 434

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
 Frame = +1

Query: 304 LYFDAQATTPMDPRVLDVMLPYLVSYHGNPHSRTHAYGWESEAAVEKAREQVANLIN-AE 480
           +YFD  AT+     V+  +  Y   Y+ N H   H    ++  A E AR +VAN +N A 
Sbjct: 10  VYFDNGATSQKPSCVMKTLDEYYRFYNSNVHRGIHVLSAKATDAYESARTKVANFVNAAN 69

Query: 481 PKEIIFT 501
            +EI+FT
Sbjct: 70  SREIVFT 76


>10_08_0789 +
           20569738-20570207,20573425-20573464,20573484-20573536,
           20573633-20574212,20574323-20575384,20575631-20575813,
           20576112-20576199,20576285-20576532,20576712-20577053,
           20579026-20579163,20579521-20579547
          Length = 1076

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
 Frame = +1

Query: 241 NFFSDSANDKFSLKHEE----VGRPLYFDAQATTPMDPRVLDVMLPYLVSYHGNPHSRTH 408
           N  S++ NDK  +K EE    +G P    ++ T    P     +LP L    G+PH   H
Sbjct: 774 NTLSEALNDK--IKAEELSLTIGSPKQLYSEFTWLHRPHNQKYILPQLCDQKGHPHCTVH 831

Query: 409 A 411
           A
Sbjct: 832 A 832


>10_01_0147 -
           1722947-1723168,1723268-1723464,1723654-1723690,
           1724688-1725584
          Length = 450

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
 Frame = +1

Query: 361 LPYLVSYHGNPHSRTHAYGWESEAAVEKAR--EQVANLINAEPKEIIFTS 504
           L Y     GN +S   AYGW S A  ++AR  E V      E    +FTS
Sbjct: 105 LRYTTRPEGNTNSNEDAYGWISHALQKQARVLEVVVFCCLFELDHSVFTS 154


>06_01_1096 -
           8988463-8989167,8989335-8989361,8989560-8989648,
           8989830-8990039,8990877-8991047,8991595-8991777,
           8991886-8991969,8992067-8992178
          Length = 526

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 18/64 (28%), Positives = 29/64 (45%)
 Frame = +1

Query: 265 DKFSLKHEEVGRPLYFDAQATTPMDPRVLDVMLPYLVSYHGNPHSRTHAYGWESEAAVEK 444
           + +++ H+E   PL  D +A TP          P  V  H   H R +  GW+ + A ++
Sbjct: 381 ESYAIPHDETPPPL--DMRAATPRKNYAFMTKEPEKV--HHVRHGRPYFNGWDMQHAPQQ 436

Query: 445 AREQ 456
             EQ
Sbjct: 437 QPEQ 440


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,260,857
Number of Sequences: 37544
Number of extensions: 324548
Number of successful extensions: 670
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 670
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)