Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_C19
         (867 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067211-14|AAC16992.2|  412|Caenorhabditis elegans Hypothetical...   140   2e-33
U23139-11|AAK31490.1|  328|Caenorhabditis elegans Hypothetical p...    64   1e-10
Z81123-1|CAB03364.2|  405|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z81132-14|CAB03432.3|  378|Caenorhabditis elegans Hypothetical p...    29   5.7  

>AF067211-14|AAC16992.2|  412|Caenorhabditis elegans Hypothetical
           protein B0205.6 protein.
          Length = 412

 Score =  140 bits (338), Expect = 2e-33
 Identities = 66/116 (56%), Positives = 82/116 (70%), Gaps = 1/116 (0%)
 Frame = +2

Query: 509 ATESNNISVKGVGRFYAPR-KKHVITTQIEHKCVLDSCRALXGEGFXITYLPVQQNGIIN 685
           ATESNN+++KGV +F     K H+IT Q EHKCVLDSCR L  EGF +TYLPV + G+++
Sbjct: 81  ATESNNLAIKGVAKFRKQSGKNHIITLQTEHKCVLDSCRYLENEGFKVTYLPVDKGGMVD 140

Query: 686 LKDLEDAITPETXLVSIMTVNNEIXVXXPIEXIGXICXXXKXFFHTDAAQXVGKGP 853
           ++ L  +IT ET LVSIM VNNEI V  PI+ IG +C     +FHTDAAQ  GK P
Sbjct: 141 MEQLTQSITAETCLVSIMFVNNEIGVMQPIKQIGELCRSKGVYFHTDAAQATGKVP 196



 Score =  112 bits (269), Expect = 4e-25
 Identities = 46/69 (66%), Positives = 59/69 (85%)
 Frame = +1

Query: 298 RPLYFDAQATTPMDPRVLDVMLPYLVSYHGNPHSRTHAYGWESEAAVEKAREQVANLINA 477
           +P+Y D QAT PMDPRV+D MLPY+++  GNPHSRTH+YGW++E  VE+ARE VANLI A
Sbjct: 11  QPIYLDVQATAPMDPRVVDAMLPYMINDFGNPHSRTHSYGWKAEEGVEQAREHVANLIKA 70

Query: 478 EPKEIIFTS 504
           +P++IIFTS
Sbjct: 71  DPRDIIFTS 79


>U23139-11|AAK31490.1|  328|Caenorhabditis elegans Hypothetical
           protein F13H8.9 protein.
          Length = 328

 Score = 64.1 bits (149), Expect = 1e-10
 Identities = 43/122 (35%), Positives = 62/122 (50%), Gaps = 8/122 (6%)
 Frame = +2

Query: 512 TESNNISVKGVGRFYAPRKK--HVITTQIEHKCVLDSCRALXGEG-FXITYLPVQQ-NGI 679
           TESNN  ++G  R      K  H+ITT IEH  +L+  +    +G   +TY+ +    G 
Sbjct: 16  TESNNWVIEGTIRNAKKVSKLPHIITTNIEHPSILEPLKRREEDGEISVTYVSINPLTGF 75

Query: 680 INLKDLEDAITPETXLVSIMTVNNEIXVXXPI-EXIGXICXXXK---XFFHTDAAQXVGK 847
           +  + + DA+T +T LV+IM  NN+  V  P+ E    I    K    F H+D AQ  GK
Sbjct: 76  VTSQSILDALTSDTCLVTIMLANNDTGVLQPVSEIFQAIREKLKTNVPFLHSDVAQAAGK 135

Query: 848 GP 853
            P
Sbjct: 136 IP 137


>Z81123-1|CAB03364.2|  405|Caenorhabditis elegans Hypothetical
           protein T14D7.1 protein.
          Length = 405

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 18/74 (24%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
 Frame = +2

Query: 638 GFXITYLPVQQNGIINLKDLEDAITP-ETXLVSIMTVNNEIXVXXPIEXIGXICXXXKXF 814
           G  +  +   Q   + ++D+  AI   +  LV +   ++   V  P+E IG  C      
Sbjct: 137 GIEVKKITAPQGQAVPVEDIRKAIADYKPNLVFVCQGDSSTGVAQPLETIGDACREHGAL 196

Query: 815 FHTDAAQXVGKGPF 856
           F  D    +G  PF
Sbjct: 197 FLVDTVASLGGTPF 210


>Z81132-14|CAB03432.3|  378|Caenorhabditis elegans Hypothetical
           protein T26E4.3 protein.
          Length = 378

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 18/49 (36%), Positives = 21/49 (42%)
 Frame = +1

Query: 256 SANDKFSLKHEEVGRPLYFDAQATTPMDPRVLDVMLPYLVSYHGNPHSR 402
           S ND     H   G P Y + +   P DPR   V   YLV  +   HSR
Sbjct: 218 SKNDFIICTHIHRGEPPYNNHRK--PSDPRFTRVATEYLVDIYEKSHSR 264


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,471,546
Number of Sequences: 27780
Number of extensions: 317263
Number of successful extensions: 643
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 641
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)