Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_C18
(900 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 257 9e-69
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 257 9e-69
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 257 9e-69
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 257 9e-69
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 257 9e-69
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 257 9e-69
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 257 9e-69
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 257 9e-69
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 257 9e-69
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 255 3e-68
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 246 1e-65
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 126 2e-29
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 97 1e-20
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 97 1e-20
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 96 3e-20
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 96 3e-20
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 77 1e-14
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 75 9e-14
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 54 2e-07
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 35 0.091
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 35 0.091
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 31 0.85
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 31 1.1
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 31 1.1
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 31 1.1
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 31 1.1
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 30 2.6
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 29 6.0
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 28 7.9
AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical ... 28 7.9
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 257 bits (629), Expect = 9e-69
Identities = 135/210 (64%), Positives = 142/210 (67%)
Frame = +1
Query: 247 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 426
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 427 VLLTEAPLNPKANRGEDDPDHV*DLQLXXXXXXXXXXXXXXXXXXXXXXXXXXXEMVSPT 606
VLLTEAPLNPKANR + + V+ T
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT 163
Query: 607 PYPSTKVTLCPTPSSXLDLAGRDLTDYLMKILTERGYSFTTTAXREIVRDIKEXLCYVAL 786
P + P LDLAGRDLTDYLMKILTERGYSFTTTA REIVRDIKE LCYVAL
Sbjct: 164 -VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL 222
Query: 787 DFXQXMATXXXSTXLXXSXXLPDGQVXPIG 876
DF Q MAT S+ L S LPDGQV +G
Sbjct: 223 DFEQEMATAASSSSLEKSYELPDGQVITVG 252
Score = 98.7 bits (235), Expect = 5e-21
Identities = 46/51 (90%), Positives = 48/51 (94%)
Frame = +3
Query: 510 PXMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRSGL 662
P MYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILR L
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDL 181
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +3
Query: 117 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 245
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 32.3 bits (70), Expect = 0.49
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +2
Query: 470 EKMTQIMFETFNSP 511
EKMTQIMFETFN+P
Sbjct: 118 EKMTQIMFETFNTP 131
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 257 bits (629), Expect = 9e-69
Identities = 135/210 (64%), Positives = 142/210 (67%)
Frame = +1
Query: 247 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 426
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 427 VLLTEAPLNPKANRGEDDPDHV*DLQLXXXXXXXXXXXXXXXXXXXXXXXXXXXEMVSPT 606
VLLTEAPLNPKANR + + V+ T
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHT 163
Query: 607 PYPSTKVTLCPTPSSXLDLAGRDLTDYLMKILTERGYSFTTTAXREIVRDIKEXLCYVAL 786
P + P LDLAGRDLTDYLMKILTERGYSFTTTA REIVRDIKE LCYVAL
Sbjct: 164 -VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL 222
Query: 787 DFXQXMATXXXSTXLXXSXXLPDGQVXPIG 876
DF Q MAT S+ L S LPDGQV +G
Sbjct: 223 DFEQEMATAASSSSLEKSYELPDGQVITVG 252
Score = 99.1 bits (236), Expect = 4e-21
Identities = 47/51 (92%), Positives = 48/51 (94%)
Frame = +3
Query: 510 PXMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRSGL 662
P MYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILR L
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDL 181
Score = 97.5 bits (232), Expect = 1e-20
Identities = 43/43 (100%), Positives = 43/43 (100%)
Frame = +3
Query: 117 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 245
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 32.3 bits (70), Expect = 0.49
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +2
Query: 470 EKMTQIMFETFNSP 511
EKMTQIMFETFN+P
Sbjct: 118 EKMTQIMFETFNTP 131
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 257 bits (629), Expect = 9e-69
Identities = 135/210 (64%), Positives = 142/210 (67%)
Frame = +1
Query: 247 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 426
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 427 VLLTEAPLNPKANRGEDDPDHV*DLQLXXXXXXXXXXXXXXXXXXXXXXXXXXXEMVSPT 606
VLLTEAPLNPKANR + + V+ T
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT 163
Query: 607 PYPSTKVTLCPTPSSXLDLAGRDLTDYLMKILTERGYSFTTTAXREIVRDIKEXLCYVAL 786
P + P LDLAGRDLTDYLMKILTERGYSFTTTA REIVRDIKE LCYVAL
Sbjct: 164 -VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL 222
Query: 787 DFXQXMATXXXSTXLXXSXXLPDGQVXPIG 876
DF Q MAT S+ L S LPDGQV +G
Sbjct: 223 DFEQEMATAASSSSLEKSYELPDGQVITVG 252
Score = 98.7 bits (235), Expect = 5e-21
Identities = 46/51 (90%), Positives = 48/51 (94%)
Frame = +3
Query: 510 PXMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRSGL 662
P MYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILR L
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDL 181
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +3
Query: 117 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 245
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 32.3 bits (70), Expect = 0.49
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +2
Query: 470 EKMTQIMFETFNSP 511
EKMTQIMFETFN+P
Sbjct: 118 EKMTQIMFETFNTP 131
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 257 bits (629), Expect = 9e-69
Identities = 135/210 (64%), Positives = 142/210 (67%)
Frame = +1
Query: 247 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 426
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 427 VLLTEAPLNPKANRGEDDPDHV*DLQLXXXXXXXXXXXXXXXXXXXXXXXXXXXEMVSPT 606
VLLTEAPLNPKANR + + V+ T
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT 163
Query: 607 PYPSTKVTLCPTPSSXLDLAGRDLTDYLMKILTERGYSFTTTAXREIVRDIKEXLCYVAL 786
P + P LDLAGRDLTDYLMKILTERGYSFTTTA REIVRDIKE LCYVAL
Sbjct: 164 -VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL 222
Query: 787 DFXQXMATXXXSTXLXXSXXLPDGQVXPIG 876
DF Q MAT S+ L S LPDGQV +G
Sbjct: 223 DFEQEMATAASSSSLEKSYELPDGQVITVG 252
Score = 98.7 bits (235), Expect = 5e-21
Identities = 46/51 (90%), Positives = 48/51 (94%)
Frame = +3
Query: 510 PXMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRSGL 662
P MYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILR L
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDL 181
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +3
Query: 117 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 245
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 32.3 bits (70), Expect = 0.49
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +2
Query: 470 EKMTQIMFETFNSP 511
EKMTQIMFETFN+P
Sbjct: 118 EKMTQIMFETFNTP 131
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 257 bits (629), Expect = 9e-69
Identities = 135/210 (64%), Positives = 142/210 (67%)
Frame = +1
Query: 247 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 426
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 427 VLLTEAPLNPKANRGEDDPDHV*DLQLXXXXXXXXXXXXXXXXXXXXXXXXXXXEMVSPT 606
VLLTEAPLNPKANR + + V+ T
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT 163
Query: 607 PYPSTKVTLCPTPSSXLDLAGRDLTDYLMKILTERGYSFTTTAXREIVRDIKEXLCYVAL 786
P + P LDLAGRDLTDYLMKILTERGYSFTTTA REIVRDIKE LCYVAL
Sbjct: 164 -VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL 222
Query: 787 DFXQXMATXXXSTXLXXSXXLPDGQVXPIG 876
DF Q MAT S+ L S LPDGQV +G
Sbjct: 223 DFEQEMATAASSSSLEKSYELPDGQVITVG 252
Score = 98.7 bits (235), Expect = 5e-21
Identities = 46/51 (90%), Positives = 48/51 (94%)
Frame = +3
Query: 510 PXMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRSGL 662
P MYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILR L
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDL 181
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +3
Query: 117 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 245
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 32.3 bits (70), Expect = 0.49
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +2
Query: 470 EKMTQIMFETFNSP 511
EKMTQIMFETFN+P
Sbjct: 118 EKMTQIMFETFNTP 131
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 257 bits (629), Expect = 9e-69
Identities = 135/210 (64%), Positives = 142/210 (67%)
Frame = +1
Query: 247 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 426
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 427 VLLTEAPLNPKANRGEDDPDHV*DLQLXXXXXXXXXXXXXXXXXXXXXXXXXXXEMVSPT 606
VLLTEAPLNPKANR + + V+ T
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHT 163
Query: 607 PYPSTKVTLCPTPSSXLDLAGRDLTDYLMKILTERGYSFTTTAXREIVRDIKEXLCYVAL 786
P + P LDLAGRDLTDYLMKILTERGYSFTTTA REIVRDIKE LCYVAL
Sbjct: 164 -VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL 222
Query: 787 DFXQXMATXXXSTXLXXSXXLPDGQVXPIG 876
DF Q MAT S+ L S LPDGQV +G
Sbjct: 223 DFEQEMATAASSSSLEKSYELPDGQVITVG 252
Score = 99.1 bits (236), Expect = 4e-21
Identities = 47/51 (92%), Positives = 48/51 (94%)
Frame = +3
Query: 510 PXMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRSGL 662
P MYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILR L
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDL 181
Score = 95.9 bits (228), Expect = 3e-20
Identities = 41/43 (95%), Positives = 43/43 (100%)
Frame = +3
Query: 117 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 245
MCDDDVAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 32.3 bits (70), Expect = 0.49
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +2
Query: 470 EKMTQIMFETFNSP 511
EKMTQIMFETFN+P
Sbjct: 118 EKMTQIMFETFNTP 131
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 257 bits (629), Expect = 9e-69
Identities = 135/210 (64%), Positives = 142/210 (67%)
Frame = +1
Query: 247 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 426
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 427 VLLTEAPLNPKANRGEDDPDHV*DLQLXXXXXXXXXXXXXXXXXXXXXXXXXXXEMVSPT 606
VLLTEAPLNPKANR + + V+ T
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT 163
Query: 607 PYPSTKVTLCPTPSSXLDLAGRDLTDYLMKILTERGYSFTTTAXREIVRDIKEXLCYVAL 786
P + P LDLAGRDLTDYLMKILTERGYSFTTTA REIVRDIKE LCYVAL
Sbjct: 164 -VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL 222
Query: 787 DFXQXMATXXXSTXLXXSXXLPDGQVXPIG 876
DF Q MAT S+ L S LPDGQV +G
Sbjct: 223 DFEQEMATAASSSSLEKSYELPDGQVITVG 252
Score = 98.7 bits (235), Expect = 5e-21
Identities = 46/51 (90%), Positives = 48/51 (94%)
Frame = +3
Query: 510 PXMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRSGL 662
P MYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILR L
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDL 181
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +3
Query: 117 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 245
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 32.3 bits (70), Expect = 0.49
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +2
Query: 470 EKMTQIMFETFNSP 511
EKMTQIMFETFN+P
Sbjct: 118 EKMTQIMFETFNTP 131
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 257 bits (629), Expect = 9e-69
Identities = 135/210 (64%), Positives = 142/210 (67%)
Frame = +1
Query: 247 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 426
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 30 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 89
Query: 427 VLLTEAPLNPKANRGEDDPDHV*DLQLXXXXXXXXXXXXXXXXXXXXXXXXXXXEMVSPT 606
VLLTEAPLNPKANR + + V+ T
Sbjct: 90 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT 149
Query: 607 PYPSTKVTLCPTPSSXLDLAGRDLTDYLMKILTERGYSFTTTAXREIVRDIKEXLCYVAL 786
P + P LDLAGRDLTDYLMKILTERGYSFTTTA REIVRDIKE LCYVAL
Sbjct: 150 -VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL 208
Query: 787 DFXQXMATXXXSTXLXXSXXLPDGQVXPIG 876
DF Q MAT S+ L S LPDGQV +G
Sbjct: 209 DFEQEMATAASSSSLEKSYELPDGQVITVG 238
Score = 98.7 bits (235), Expect = 5e-21
Identities = 46/51 (90%), Positives = 48/51 (94%)
Frame = +3
Query: 510 PXMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRSGL 662
P MYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILR L
Sbjct: 117 PAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDL 167
Score = 56.8 bits (131), Expect = 2e-08
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = +3
Query: 171 KAGFAGDDAPRAVFPSIVGRPRHQG 245
+AGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQG 29
Score = 32.3 bits (70), Expect = 0.49
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +2
Query: 470 EKMTQIMFETFNSP 511
EKMTQIMFETFN+P
Sbjct: 104 EKMTQIMFETFNTP 117
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 257 bits (629), Expect = 9e-69
Identities = 135/210 (64%), Positives = 142/210 (67%)
Frame = +1
Query: 247 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 426
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 427 VLLTEAPLNPKANRGEDDPDHV*DLQLXXXXXXXXXXXXXXXXXXXXXXXXXXXEMVSPT 606
VLLTEAPLNPKANR + + V+ T
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT 163
Query: 607 PYPSTKVTLCPTPSSXLDLAGRDLTDYLMKILTERGYSFTTTAXREIVRDIKEXLCYVAL 786
P + P LDLAGRDLTDYLMKILTERGYSFTTTA REIVRDIKE LCYVAL
Sbjct: 164 -VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL 222
Query: 787 DFXQXMATXXXSTXLXXSXXLPDGQVXPIG 876
DF Q MAT S+ L S LPDGQV +G
Sbjct: 223 DFEQEMATAASSSSLEKSYELPDGQVITVG 252
Score = 98.7 bits (235), Expect = 5e-21
Identities = 46/51 (90%), Positives = 48/51 (94%)
Frame = +3
Query: 510 PXMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRSGL 662
P MYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILR L
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDL 181
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +3
Query: 117 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 245
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 32.3 bits (70), Expect = 0.49
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +2
Query: 470 EKMTQIMFETFNSP 511
EKMTQIMFETFN+P
Sbjct: 118 EKMTQIMFETFNTP 131
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 255 bits (625), Expect = 3e-68
Identities = 134/209 (64%), Positives = 141/209 (67%)
Frame = +1
Query: 250 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 429
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 430 LLTEAPLNPKANRGEDDPDHV*DLQLXXXXXXXXXXXXXXXXXXXXXXXXXXXEMVSPTP 609
LLTEAPLNPKANR + + V+ T
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT- 119
Query: 610 YPSTKVTLCPTPSSXLDLAGRDLTDYLMKILTERGYSFTTTAXREIVRDIKEXLCYVALD 789
P + P LDLAGRDLTDYLMKILTERGYSFTTTA REIVRDIKE LCYVALD
Sbjct: 120 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 179
Query: 790 FXQXMATXXXSTXLXXSXXLPDGQVXPIG 876
F Q MAT S+ L S LPDGQV +G
Sbjct: 180 FEQEMATAASSSSLEKSYELPDGQVITVG 208
Score = 98.7 bits (235), Expect = 5e-21
Identities = 46/51 (90%), Positives = 48/51 (94%)
Frame = +3
Query: 510 PXMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRSGL 662
P MYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILR L
Sbjct: 87 PAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDL 137
Score = 32.3 bits (70), Expect = 0.49
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +2
Query: 470 EKMTQIMFETFNSP 511
EKMTQIMFETFN+P
Sbjct: 74 EKMTQIMFETFNTP 87
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 246 bits (603), Expect = 1e-65
Identities = 128/210 (60%), Positives = 139/210 (66%)
Frame = +1
Query: 247 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 426
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELR+APEEHP
Sbjct: 43 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHP 102
Query: 427 VLLTEAPLNPKANRGEDDPDHV*DLQLXXXXXXXXXXXXXXXXXXXXXXXXXXXEMVSPT 606
VLLTEAPLNPK+NR + + V+ T
Sbjct: 103 VLLTEAPLNPKSNREKMTQIMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHT 162
Query: 607 PYPSTKVTLCPTPSSXLDLAGRDLTDYLMKILTERGYSFTTTAXREIVRDIKEXLCYVAL 786
P + P LDLAGRDLTDY+MKILTERGY+FTTTA REIVRDIKE LCYVA
Sbjct: 163 -VPIYEGYALPHAIQRLDLAGRDLTDYMMKILTERGYTFTTTAEREIVRDIKEKLCYVAH 221
Query: 787 DFXQXMATXXXSTXLXXSXXLPDGQVXPIG 876
DF +A S+ L S LPDGQV IG
Sbjct: 222 DFESELAAAASSSSLEKSYELPDGQVITIG 251
Score = 93.1 bits (221), Expect = 2e-19
Identities = 44/51 (86%), Positives = 46/51 (90%)
Frame = +3
Query: 510 PXMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRSGL 662
P MYV IQAVLSLYASGRTTGIVLD+GDGV+HTVPIYEGYALPHAI R L
Sbjct: 130 PAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHTVPIYEGYALPHAIQRLDL 180
Score = 86.6 bits (205), Expect = 2e-17
Identities = 37/41 (90%), Positives = 41/41 (100%)
Frame = +3
Query: 123 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 245
++++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 42
Score = 32.3 bits (70), Expect = 0.49
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +2
Query: 470 EKMTQIMFETFNSP 511
EKMTQIMFETFN+P
Sbjct: 117 EKMTQIMFETFNTP 130
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 126 bits (305), Expect = 2e-29
Identities = 68/182 (37%), Positives = 95/182 (52%), Gaps = 1/182 (0%)
Frame = +1
Query: 247 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEH 423
VM G D ++G +A+S RG+ +++YP+EHGI+ NW DMEKIW + F ++L++ PEEH
Sbjct: 46 VMAGGLDGDIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEH 105
Query: 424 PVLLTEAPLNPKANRGEDDPDHV*DLQLXXXXXXXXXXXXXXXXXXXXXXXXXXXEMVSP 603
PVLLT+APLNP NR + + V+
Sbjct: 106 PVLLTDAPLNPLKNRERSAEIFFETFNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTH 165
Query: 604 TPYPSTKVTLCPTPSSXLDLAGRDLTDYLMKILTERGYSFTTTAXREIVRDIKEXLCYVA 783
P K +DLAGRD+T+YL +L GY F + EIVR++KE CY+A
Sbjct: 166 A-VPIVKGFAMKHAIQRMDLAGRDVTEYLRVLLRREGYEFHRSNEFEIVREMKENACYLA 224
Query: 784 LD 789
LD
Sbjct: 225 LD 226
Score = 78.6 bits (185), Expect = 6e-15
Identities = 38/72 (52%), Positives = 48/72 (66%)
Frame = +3
Query: 510 PXMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRSGLGWSRLDRLP 689
P +Y+ +QAVLSLYA+GRTTG+VLDSGDGV+H VPI +G+A+ HAI R L +
Sbjct: 134 PALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPIVKGFAMKHAIQRMDLAGRDVTEYL 193
Query: 690 HEDPHREGLLVH 725
REG H
Sbjct: 194 RVLLRREGYEFH 205
Score = 47.2 bits (107), Expect = 2e-05
Identities = 22/42 (52%), Positives = 30/42 (71%), Gaps = 3/42 (7%)
Frame = +3
Query: 123 DDDVAA---LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 239
D DV A +V+DNGSG+ KAGFAG+ P+ F + VGRP++
Sbjct: 2 DYDVIANQPVVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKY 43
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 97.5 bits (232), Expect = 1e-20
Identities = 43/43 (100%), Positives = 43/43 (100%)
Frame = +3
Query: 117 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 245
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 95.1 bits (226), Expect = 6e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +1
Query: 247 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKI 375
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 97.5 bits (232), Expect = 1e-20
Identities = 43/43 (100%), Positives = 43/43 (100%)
Frame = +3
Query: 117 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 245
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 89.4 bits (212), Expect = 3e-18
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +1
Query: 247 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDM 366
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDM
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +3
Query: 117 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 245
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 95.1 bits (226), Expect = 6e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +1
Query: 247 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKI 375
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +3
Query: 117 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 245
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 95.1 bits (226), Expect = 6e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +1
Query: 247 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKI 375
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 77.4 bits (182), Expect = 1e-14
Identities = 41/96 (42%), Positives = 58/96 (60%), Gaps = 1/96 (1%)
Frame = +1
Query: 184 PATTRPAPSSRPSWVALATRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDD 363
PA P+ RP + +T+ V + KD VG+E R +L + YP+++GI+ NWDD
Sbjct: 28 PAHIFPSMVGRP--IVRSTQRVG-NIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDD 84
Query: 364 MEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANR 468
M +W HTF E L + P+E +LLTE PLNP +NR
Sbjct: 85 MAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNR 120
Score = 74.5 bits (175), Expect = 9e-14
Identities = 35/74 (47%), Positives = 47/74 (63%)
Frame = +1
Query: 655 LDLAGRDLTDYLMKILTERGYSFTTTAXREIVRDIKEXLCYVALDFXQXMATXXXSTXLX 834
LD+AGRD+T YL+K+L +RGY+F +A E VR +KE LCY+A D Q +T L
Sbjct: 182 LDIAGRDITKYLIKLLLQRGYNFNHSADFETVRQMKEKLCYIAYDVEQEERLALETTVLS 241
Query: 835 XSXXLPDGQVXPIG 876
LPDG+V +G
Sbjct: 242 QQYTLPDGRVIRLG 255
Score = 68.1 bits (159), Expect = 8e-12
Identities = 29/46 (63%), Positives = 37/46 (80%)
Frame = +3
Query: 516 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 653
+YVA+QAVL+LYA G TG+V+DSGDGV+H P+YEG+AL H R
Sbjct: 136 IYVAVQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFALHHLTRR 181
Score = 45.6 bits (103), Expect = 5e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +3
Query: 141 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 233
+VVDNG+G K G+AG + P +FPS+VGRP
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 74.5 bits (175), Expect = 9e-14
Identities = 35/75 (46%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +1
Query: 247 VMVGMGQKDSYVGDEAQSKRGI-LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEH 423
V G+ D ++GDEA S T+KYPI HGI+ +WD ME+ W + LR PE+H
Sbjct: 56 VGAGIDDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDH 115
Query: 424 PVLLTEAPLNPKANR 468
LLTE PLN NR
Sbjct: 116 FFLLTEPPLNTPENR 130
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 8/54 (14%)
Frame = +3
Query: 510 PXMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAI 647
P +Y+A+QAVL+L AS + TG+V+DSGDGV+H +P+ +GY + I
Sbjct: 144 PGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHCIPVADGYVIGSCI 197
Score = 37.5 bits (83), Expect = 0.013
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +1
Query: 655 LDLAGRDLTDYLMKILTERGYSFTTTAXREIVRDIKEXLCYVALD 789
+ +AGRD+T ++ +L +R ++ E+ + IKE CYV D
Sbjct: 200 IPIAGRDITYFIQSLLRDREHTIPAEQSYEVAKMIKEKFCYVCPD 244
Score = 35.5 bits (78), Expect = 0.052
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 117 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 224
M + A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 53.6 bits (123), Expect = 2e-07
Identities = 28/94 (29%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Frame = +3
Query: 510 PXMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRSGLGWSRL-DRL 686
P Y++ VLS +A GRT G+++DSG + VP+++GYA+ HA+++ +G + ++L
Sbjct: 153 PAYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPVFDGYAVTHAVVKCPIGGDLITEQL 212
Query: 687 PHEDPHREGLLVHHHR*XGNRS*HQGEXLLCRPR 788
++ ++ +R G ++GE PR
Sbjct: 213 AQMLDQQKIDVIPTYRIGGKEEVNEGEAPKWTPR 246
Score = 44.4 bits (100), Expect = 1e-04
Identities = 19/46 (41%), Positives = 29/46 (63%)
Frame = +1
Query: 331 IEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 468
++ G+I +W+ EKI H++ N L P EHPVL +E+ N +A R
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARR 139
Score = 33.9 bits (74), Expect = 0.16
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 126 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 224
D+V+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 34.7 bits (76), Expect = 0.091
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +1
Query: 265 QKDSYVGDEAQSKRGILTLKY--PIEHGIITNWDDMEKIWHHTF 390
+K +V E + +L Y PIE G + NWD ++IW TF
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF 82
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 34.7 bits (76), Expect = 0.091
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +1
Query: 265 QKDSYVGDEAQSKRGILTLKY--PIEHGIITNWDDMEKIWHHTF 390
+K +V E + +L Y PIE G + NWD ++IW TF
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF 82
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 34.3 bits (75), Expect = 0.12
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +3
Query: 531 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI 647
Q L LYA TTG+V+D G+ V + VP+ +GY + AI
Sbjct: 310 QPSLILYAYDVTTGVVVDIGERV-NIVPVIDGYVVESAI 347
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 31.5 bits (68), Expect = 0.85
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 148 STMAPACARPVSPATTRPAPSSRP 219
+T AP PATTRPAP+S+P
Sbjct: 317 ATRAPPATTRAPPATTRPAPASQP 340
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -3
Query: 295 GPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMP 161
GP P S P +P +P G P G +GAS+P +P P
Sbjct: 105 GPPGPGGSPGKPGKPGKP---GAPGAPGNPGKGASAPCEPVTQPP 146
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -3
Query: 295 GPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMP 161
GP P S P +P +P G P G +GAS+P +P P
Sbjct: 105 GPPGPGGSPGKPGKPGKP---GAPGAPGNPGKGASAPCEPVTQPP 146
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -3
Query: 295 GPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMP 161
GP P S P +P +P G P G +GAS+P +P P
Sbjct: 105 GPPGPGGSPGKPGKPGKP---GAPGAPGNPGKGASAPCEPVTQPP 146
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -3
Query: 295 GPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMP 161
GP P S P +P +P G P G +GAS+P +P P
Sbjct: 105 GPPGPGGSPGKPGKPGKP---GAPGAPGNPGKGASAPCEPVTQPP 146
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -3
Query: 295 GPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPA 182
GPR P P +P P G P G+ +RG P+
Sbjct: 170 GPRGPAGDAGSPGQPGHPGSPGNPGRGGQRSRGLPGPS 207
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -3
Query: 598 TPSPESSTIPVVRPEAYSESTAWMATYM 515
TP P SST+PVV P ++ T +Y+
Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTGSYL 892
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = -3
Query: 313 GYLSCSGPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMP 161
G C P P P +P P G P G + +GA++P +P+ P
Sbjct: 112 GCTGCCNPGPPGPG-GRPGKPGTPGKPGAPGNPGASGKGAAAPCEPSTPPP 161
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Frame = +3
Query: 231 PRHQGRDGRYGPERL--LRG*RGPEQERYPHSEVPHRARYHH 350
PR G GR+GP G GP + P R +HH
Sbjct: 376 PRGHGHGGRHGPPHCPGRHGHHGPPHHHHHDGRSPSRHGHHH 417
>AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical
protein T08D2.8 protein.
Length = 388
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = +1
Query: 139 RL*STMAPACARPVSPATTRPAPSSRPSWVALATR 243
RL S +AP A P S A TR APS + VA R
Sbjct: 231 RLSSAVAPRRAPPASAAPTRRAPSPKAPVVAPTRR 265
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,987,158
Number of Sequences: 27780
Number of extensions: 369809
Number of successful extensions: 1594
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1314
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1581
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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