Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_C17
(908 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46934-11|CAE18043.1| 497|Caenorhabditis elegans Hypothetical p... 30 2.0
Z46934-10|CAD18882.1| 495|Caenorhabditis elegans Hypothetical p... 30 2.0
U28991-2|AAK68307.1| 679|Caenorhabditis elegans Kinesin-associa... 29 3.5
AB017107-1|BAA88838.1| 679|Caenorhabditis elegans Kinesin assoc... 29 3.5
U13019-4|AAC24451.1| 222|Caenorhabditis elegans Hypothetical pr... 29 4.6
U13019-3|AAC24452.2| 713|Caenorhabditis elegans Hypothetical pr... 29 4.6
AL034488-4|CAA22449.1| 497|Caenorhabditis elegans Hypothetical ... 29 6.1
Z75529-3|CAA99786.2| 1099|Caenorhabditis elegans Hypothetical pr... 28 8.0
AM748824-1|CAO72178.1| 512|Caenorhabditis elegans hexosaminidas... 28 8.0
AL033513-1|CAA22078.2| 512|Caenorhabditis elegans Hypothetical ... 28 8.0
AJ010646-1|CAA09303.1| 1237|Caenorhabditis elegans calcium ATPas... 28 8.0
AC025724-13|AAK68551.1| 1234|Caenorhabditis elegans Membrane cal... 28 8.0
AC025724-12|AAK68550.1| 1160|Caenorhabditis elegans Membrane cal... 28 8.0
AC025724-11|AAM97979.1| 1137|Caenorhabditis elegans Membrane cal... 28 8.0
>Z46934-11|CAE18043.1| 497|Caenorhabditis elegans Hypothetical
protein ZK1320.12b protein.
Length = 497
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 217 DYDSAVEKSKHLYEEKKXEVITNVVNKLIRNNKMNCM 327
D D + EK + +KK IT++VN +IRN C+
Sbjct: 205 DIDFSYEKVREAMSQKKRNGITSLVNYMIRNYPSICL 241
>Z46934-10|CAD18882.1| 495|Caenorhabditis elegans Hypothetical
protein ZK1320.12a protein.
Length = 495
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 217 DYDSAVEKSKHLYEEKKXEVITNVVNKLIRNNKMNCM 327
D D + EK + +KK IT++VN +IRN C+
Sbjct: 205 DIDFSYEKVREAMSQKKRNGITSLVNYMIRNYPSICL 241
>U28991-2|AAK68307.1| 679|Caenorhabditis elegans Kinesin-associated
protein protein1, isoform b protein.
Length = 679
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = +1
Query: 259 EKKXEVITNVVNKLIRNNKMNCMEY---AYQLWLQGLQGTSSGIVSQLSSDLSSPKTRLS 429
+K EV TN++N I +N ME+ Y W+ ++ T + +L + + L+
Sbjct: 166 KKHFEVGTNIMNLFIGTLCVNAMEHETKRYDFWIAEMKKTDQETLRKLKTAIRKQAMLLA 225
Query: 430 LCTSATVSL 456
C + +L
Sbjct: 226 ACVTFLTNL 234
>AB017107-1|BAA88838.1| 679|Caenorhabditis elegans Kinesin
associated protein kap-1 protein.
Length = 679
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = +1
Query: 259 EKKXEVITNVVNKLIRNNKMNCMEY---AYQLWLQGLQGTSSGIVSQLSSDLSSPKTRLS 429
+K EV TN++N I +N ME+ Y W+ ++ T + +L + + L+
Sbjct: 166 KKHFEVGTNIMNLFIGTLCVNAMEHETKRYDFWIAEMKKTDQETLRKLKTAIRKQAMLLA 225
Query: 430 LCTSATVSL 456
C + +L
Sbjct: 226 ACVTFLTNL 234
>U13019-4|AAC24451.1| 222|Caenorhabditis elegans Hypothetical
protein T12A2.15b protein.
Length = 222
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +1
Query: 508 DGKDKTSPRVSWKLIALWENNKVYFKILNTERN 606
D KD+ +P VS KL+AL N +V+ K T +N
Sbjct: 120 DKKDQCNPYVSVKLVALDGNKEVFKKKTPTAKN 152
>U13019-3|AAC24452.2| 713|Caenorhabditis elegans Hypothetical
protein T12A2.15a protein.
Length = 713
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +1
Query: 508 DGKDKTSPRVSWKLIALWENNKVYFKILNTERN 606
D KD+ +P VS KL+AL N +V+ K T +N
Sbjct: 611 DKKDQCNPYVSVKLVALDGNKEVFKKKTPTAKN 643
>AL034488-4|CAA22449.1| 497|Caenorhabditis elegans Hypothetical
protein Y54G11A.4 protein.
Length = 497
Score = 28.7 bits (61), Expect = 6.1
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Frame = +1
Query: 640 NGDHMA---FGVNSVDSFRAQWYLQPAKYDNDVLFYIYNREYSKALTLXEDXLSPRVTAW 810
NG H F + D +R W L Y + LF+I + EY AL + + + R +
Sbjct: 227 NGRHKEGKEFMYKTEDDWRQGWMLAAHNYWHTALFHIESAEYEPALEIFDREIVKRSSKV 286
Query: 811 PGDT 822
G +
Sbjct: 287 DGSS 290
>Z75529-3|CAA99786.2| 1099|Caenorhabditis elegans Hypothetical
protein C44H9.4 protein.
Length = 1099
Score = 28.3 bits (60), Expect = 8.0
Identities = 13/54 (24%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +1
Query: 499 AYGDGKDKTSPRVSWKLIALWENNK---VYFKILNTERNQYLVLGVGTNWNGDH 651
++G + PR ++ I+ + + YF++L+ E N+Y+++ N +G H
Sbjct: 129 SWGPNFNSPKPRQVFRDISTYSYERGIRAYFRVLSAEDNKYILIACHANLHGLH 182
>AM748824-1|CAO72178.1| 512|Caenorhabditis elegans hexosaminidase
protein.
Length = 512
Score = 28.3 bits (60), Expect = 8.0
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +1
Query: 643 GDHMAFGVNSVDSFRAQWYLQPAKYDNDVLFYIYNREYSKALTLXEDXLSPRVTAW 810
G AF V D+ R + P KYDN+ L I++ +L + E+ S +V W
Sbjct: 173 GADEAFQVGICDADRE---ILPVKYDNNKLRMIFDHLRMVSLNITEEYPSTKVLMW 225
>AL033513-1|CAA22078.2| 512|Caenorhabditis elegans Hypothetical
protein Y70D2A.2 protein.
Length = 512
Score = 28.3 bits (60), Expect = 8.0
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +1
Query: 643 GDHMAFGVNSVDSFRAQWYLQPAKYDNDVLFYIYNREYSKALTLXEDXLSPRVTAW 810
G AF V D+ R + P KYDN+ L I++ +L + E+ S +V W
Sbjct: 173 GADEAFQVGICDADRE---ILPVKYDNNKLRMIFDHLRMVSLNITEEYPSTKVLMW 225
>AJ010646-1|CAA09303.1| 1237|Caenorhabditis elegans calcium ATPase
protein.
Length = 1237
Score = 28.3 bits (60), Expect = 8.0
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -3
Query: 234 NRTVVIGDDDAIVKLXLQNVVRDVGXCSIQRCHE 133
N +++GD AI L +Q+ VR +I RC E
Sbjct: 634 NEEMIVGDMTAIAVLGIQDPVRPEVPAAITRCQE 667
>AC025724-13|AAK68551.1| 1234|Caenorhabditis elegans Membrane
calcium atpase protein3, isoform b protein.
Length = 1234
Score = 28.3 bits (60), Expect = 8.0
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -3
Query: 234 NRTVVIGDDDAIVKLXLQNVVRDVGXCSIQRCHE 133
N +++GD AI L +Q+ VR +I RC E
Sbjct: 634 NEEMIVGDMTAIAVLGIQDPVRPEVPAAITRCQE 667
>AC025724-12|AAK68550.1| 1160|Caenorhabditis elegans Membrane
calcium atpase protein3, isoform a protein.
Length = 1160
Score = 28.3 bits (60), Expect = 8.0
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -3
Query: 234 NRTVVIGDDDAIVKLXLQNVVRDVGXCSIQRCHE 133
N +++GD AI L +Q+ VR +I RC E
Sbjct: 634 NEEMIVGDMTAIAVLGIQDPVRPEVPAAITRCQE 667
>AC025724-11|AAM97979.1| 1137|Caenorhabditis elegans Membrane
calcium atpase protein3, isoform c protein.
Length = 1137
Score = 28.3 bits (60), Expect = 8.0
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -3
Query: 234 NRTVVIGDDDAIVKLXLQNVVRDVGXCSIQRCHE 133
N +++GD AI L +Q+ VR +I RC E
Sbjct: 634 NEEMIVGDMTAIAVLGIQDPVRPEVPAAITRCQE 667
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,890,533
Number of Sequences: 27780
Number of extensions: 315343
Number of successful extensions: 834
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 834
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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