Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_C11
         (903 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    30   0.025
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    28   0.10 
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    25   1.2  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    24   1.6  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    24   2.2  
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    23   5.0  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   6.7  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    22   8.8  
AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc fi...    22   8.8  

>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 30.3 bits (65), Expect = 0.025
 Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 6/53 (11%)
 Frame = +1

Query: 469 VDECATNNGGCEQRCVNDPGS------FHCECSPPLSLASDGKKCVPRIPLAI 609
           +++C   NG C   C+  P          C C   L L SDG  CV ++   I
Sbjct: 33  MNQCQAVNGHCSHLCLPAPRINSKSPLLSCACPDGLKLLSDGLMCVEKVSTTI 85


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 28.3 bits (60), Expect = 0.10
 Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 6/48 (12%)
 Frame = +1

Query: 469 VDECATNNGGCEQRCVNDPGS------FHCECSPPLSLASDGKKCVPR 594
           +++C   NG C   C+  P          C C   L L SDG  CV +
Sbjct: 33  MNQCQAVNGHCSHLCLPAPRINSKSPLLSCACPDGLKLLSDGLMCVEK 80


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -3

Query: 535 GSFQDH*RSVAHTHRCSSHTRLHQHNTAAPAWSSFP 428
           G    H  +  H H   + T  HQH+T   A SS+P
Sbjct: 420 GHGHSHIHATPHHHHSHAATPHHQHSTPL-AHSSYP 454


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 19/74 (25%), Positives = 29/74 (39%)
 Frame = +1

Query: 499 CEQRCVNDPGSFHCECSPPLSLASDGKKCVPRIPLAIAEPLPLVRASSRCYAPCDTVTXL 678
           CE  C++D  +        LSL S+       +    AEP P+ +A S+C+    T   +
Sbjct: 666 CETFCLDDDDTL---LEVALSLGSEALSAAT-VRFIEAEPQPIGKALSKCHNRNVTTCNM 721

Query: 679 TXKVRQLNDQLHAT 720
             K     D    T
Sbjct: 722 FRKTNLSGDSSSGT 735


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 11/33 (33%), Positives = 14/33 (42%)
 Frame = -3

Query: 382 PCTSHACSHRFRLHGSIDFGIHRPATCWCVSQQ 284
           P T H   H  R   S+D   HR    W V ++
Sbjct: 78  PETHHPIRHGRRQSRSMDLNAHREQMSWPVKKE 110


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 394 TYSLPCTSHACSHRF 350
           T++LPC  H C   F
Sbjct: 38  THTLPCKCHLCGKAF 52


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -3

Query: 415  TQGSRNTTYSLP 380
            TQ SRN TYS P
Sbjct: 1297 TQPSRNNTYSTP 1308


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +3

Query: 48  ESRCARRWAPW 80
           E RC  +WA W
Sbjct: 142 EQRCVLKWASW 152


>AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc
           finger domain-Z2 isoform protein.
          Length = 71

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 11/31 (35%), Positives = 13/31 (41%)
 Frame = -3

Query: 289 QQCSLTHCTSASPTRHVCRDRNTRSVGHRAV 197
           Q C    C+ AS  RHV      R   +R V
Sbjct: 9   QLCGKVLCSKASLKRHVADKHAERQEEYRCV 39


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 224,586
Number of Sequences: 438
Number of extensions: 4753
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29267238
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)