Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_C10
(953 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0479 + 3606663-3607448 33 0.33
04_03_0904 + 20717005-20718087 33 0.33
02_04_0179 + 20682852-20684510,20684593-20684661,20684741-206848... 32 0.59
05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385,365... 31 1.0
03_01_0515 - 3864796-3865425 31 1.4
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 31 1.8
07_03_1107 - 24024387-24024497,24025799-24026410 30 2.4
01_06_0146 + 26969011-26969995,26970878-26970930 30 2.4
07_03_1136 + 24218601-24218734,24218769-24219906 30 3.1
09_06_0083 + 20753191-20754480 29 4.1
09_02_0543 + 10427321-10428315,10428440-10429154 29 4.1
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 29 4.1
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 29 4.1
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 5.5
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 29 5.5
06_01_0486 - 3455030-3455770 29 7.2
05_07_0035 - 27221338-27221433,27221510-27221599,27222056-272221... 29 7.2
04_02_0026 + 8708765-8710935,8711021-8711272,8711353-8711463,871... 29 7.2
03_02_0155 - 5974118-5974173,5974242-5974314,5974393-5974500,597... 29 7.2
01_07_0239 + 42222024-42222133,42222220-42222301,42222396-422224... 29 7.2
01_07_0021 - 40533864-40534583,40534779-40534814,40534909-405350... 29 7.2
01_06_0565 + 30287253-30287502,30287522-30289010,30289133-302892... 29 7.2
08_01_0059 - 394001-394708 28 9.5
01_06_0823 + 32234588-32234936,32236354-32237093,32237260-322373... 28 9.5
>07_01_0479 + 3606663-3607448
Length = 261
Score = 33.1 bits (72), Expect = 0.33
Identities = 25/75 (33%), Positives = 26/75 (34%), Gaps = 2/75 (2%)
Frame = +1
Query: 412 PGXTSXEPXGXXXRGPPGX*RXGPGXAXAGSGXPPLXGGQTGXPXPGENXGKPPXP--XG 585
PG P G PPG GP G P + G G P PG G PP P G
Sbjct: 191 PGVPPAFPGGPPP--PPGPFMRGPPPM----GPPQVRPGMPGGPPPGMRPGMPPPPFRPG 244
Query: 586 XXKAPNGHXAPXXAP 630
P G P P
Sbjct: 245 MPPPPPGPQQPGQNP 259
>04_03_0904 + 20717005-20718087
Length = 360
Score = 33.1 bits (72), Expect = 0.33
Identities = 22/67 (32%), Positives = 24/67 (35%), Gaps = 1/67 (1%)
Frame = +1
Query: 523 GGQTGXPXPGENXGKPPXPXGXXKAPNGHXAPXXAPFPXXXPPRXXTHPKXLP-XPXXTP 699
GG T P P + KP P K P+ H P P P T PK P P TP
Sbjct: 29 GGYTPTPTPVKPAPKPEKPPKEHKPPHHHEPKPEKP-PKEHKPPAYTPPKPTPTPPTYTP 87
Query: 700 AKNRXAP 720
P
Sbjct: 88 TPKPTPP 94
>02_04_0179 +
20682852-20684510,20684593-20684661,20684741-20684809,
20686779-20688206
Length = 1074
Score = 32.3 bits (70), Expect = 0.59
Identities = 25/89 (28%), Positives = 28/89 (31%)
Frame = +1
Query: 454 GPPGX*RXGPGXAXAGSGXPPLXGGQTGXPXPGENXGKPPXPXGXXKAPNGHXAPXXAPF 633
G P G AG+G PP Q P PP P + G P P
Sbjct: 54 GDPPPPATGSAEEVAGNGEPP----QPPATDPASEPTAPPEPQRATEEKKGDEPPP--PA 107
Query: 634 PXXXPPRXXTHPKXLPXPXXTPAKNRXAP 720
H + LP P TPA AP
Sbjct: 108 STGVKEEVAGHGQPLPPPTSTPASEPPAP 136
>05_01_0004 -
34967-35149,35340-35501,36078-36225,36309-36385,
36507-36577,36850-37263,37518-38268
Length = 601
Score = 31.5 bits (68), Expect = 1.0
Identities = 24/87 (27%), Positives = 27/87 (31%), Gaps = 7/87 (8%)
Frame = +1
Query: 481 PGXAXAGSGXPPLXGGQTGXPXPG--ENXGKPPXPXGXX-KAP----NGHXAPXXAPFPX 639
P S PPL P P N PP P ++P P AP P
Sbjct: 61 PASPPLPSATPPLAASPPPPPPPPPPRNSPSPPKPPSQAAQSPLPPTTTTTTPPTAPVPA 120
Query: 640 XXPPRXXTHPKXLPXPXXTPAKNRXAP 720
PP P P P TP + P
Sbjct: 121 AAPPPTAPSPYSAPSPTPTPTHTQPRP 147
>03_01_0515 - 3864796-3865425
Length = 209
Score = 31.1 bits (67), Expect = 1.4
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +2
Query: 539 PPNPGKTXENPRXQXAXXRPXTATXPPXXPPSPXXXXPAXXPTP 670
PP P T P P A PP PPSP P P
Sbjct: 74 PPPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPPPPSPVKSSPP 117
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 30.7 bits (66), Expect = 1.8
Identities = 23/83 (27%), Positives = 24/83 (28%), Gaps = 2/83 (2%)
Frame = +1
Query: 409 GPGXTSXEPXGXXXRGPPGX*RXGPGXAXAGSGXPPLX--GGQTGXPXPGENXGKPPXPX 582
G G P PP P A AGSG PP PG G PP P
Sbjct: 317 GTGAPPPPPAHPAAPAPPPP-APSPSAAGAGSGPPPPPPPAAPAAPRPPGPGPGPPPPPG 375
Query: 583 GXXKAPNGHXAPXXAPFPXXXPP 651
+ G P P P
Sbjct: 376 AAGRGGGGPPPPALPGGPRARGP 398
>07_03_1107 - 24024387-24024497,24025799-24026410
Length = 240
Score = 30.3 bits (65), Expect = 2.4
Identities = 18/53 (33%), Positives = 21/53 (39%), Gaps = 5/53 (9%)
Frame = +2
Query: 524 AXKRAPPNPGKTXENPRXQXAXXRPXTATXPP-----XXPPSPXXXXPAXXPT 667
A +APP P + A P A+ PP PPSP PA PT
Sbjct: 82 APTKAPPTKSTKAPAPAPKAAKATPPPASSPPVEAPVASPPSPAAEAPATIPT 134
>01_06_0146 + 26969011-26969995,26970878-26970930
Length = 345
Score = 30.3 bits (65), Expect = 2.4
Identities = 22/79 (27%), Positives = 25/79 (31%), Gaps = 6/79 (7%)
Frame = +1
Query: 481 PGXAXAGSGXPPLXGGQTGXPXPGENXGKPPXPXGXXKAPNGH----XAPXXAPFPXXXP 648
P A A + P G P P + PP P P H P AP P P
Sbjct: 50 PASAAAPTTPSPNHSGDPSRPIPSQAPAPPPPPTADPSPPLPHDNRTPQPRAAPPPAPAP 109
Query: 649 --PRXXTHPKXLPXPXXTP 699
P + P LP P
Sbjct: 110 DQPAPPSPPPSLPPSPPAP 128
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 29.9 bits (64), Expect = 3.1
Identities = 19/48 (39%), Positives = 20/48 (41%), Gaps = 5/48 (10%)
Frame = +1
Query: 457 PPGX*RXGPGXAXAGSGXPPLXGGQTGXP--XPGENXG---KPPXPXG 585
PPG PG G PP GG G P PG G +PP P G
Sbjct: 91 PPGG-GGAPGPLGGGGARPPGGGGGGGPPSLPPGAGGGGGARPPAPGG 137
>09_06_0083 + 20753191-20754480
Length = 429
Score = 29.5 bits (63), Expect = 4.1
Identities = 18/56 (32%), Positives = 20/56 (35%)
Frame = +1
Query: 511 PPLXGGQTGXPXPGENXGKPPXPXGXXKAPNGHXAPXXAPFPXXXPPRXXTHPKXL 678
PPL G+T PG P P G P H +P P PP P L
Sbjct: 305 PPLPHGKTPSGAPGGIALPPAAPAGGGM-PQQHGSPHHLPLGASPPPEAAAVPDAL 359
>09_02_0543 + 10427321-10428315,10428440-10429154
Length = 569
Score = 29.5 bits (63), Expect = 4.1
Identities = 19/69 (27%), Positives = 23/69 (33%)
Frame = +1
Query: 514 PLXGGQTGXPXPGENXGKPPXPXGXXKAPNGHXAPXXAPFPXXXPPRXXTHPKXLPXPXX 693
P Q P G PP P P AP +P P PP P P P
Sbjct: 18 PTPAPQATPPPAIPESGPPPPPAPDMPPPPPTPAPQSSPAP---PPAPDMTPPPGPGPAA 74
Query: 694 TPAKNRXAP 720
P+ + +P
Sbjct: 75 APSPHSPSP 83
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 29.5 bits (63), Expect = 4.1
Identities = 21/66 (31%), Positives = 23/66 (34%), Gaps = 2/66 (3%)
Frame = +1
Query: 511 PPLXGGQTGXPXPGENXG--KPPXPXGXXKAPNGHXAPXXAPFPXXXPPRXXTHPKXLPX 684
PP G + G P P + G PP P G P AP P PP P P
Sbjct: 1164 PPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAP-PMPPGVPGGPPPPPG 1222
Query: 685 PXXTPA 702
PA
Sbjct: 1223 GRGLPA 1228
Score = 28.7 bits (61), Expect = 7.2
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +1
Query: 481 PGXAXAGSGXPPLXGGQTGXPXPGENXGKPPXPXGXXKAP 600
P G G PP G P P G PP P G P
Sbjct: 1188 PPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPPPPGGRGLP 1227
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 29.5 bits (63), Expect = 4.1
Identities = 20/65 (30%), Positives = 23/65 (35%), Gaps = 1/65 (1%)
Frame = +1
Query: 511 PPLXGGQTGXPXPGENXGKP-PXPXGXXKAPNGHXAPXXAPFPXXXPPRXXTHPKXLPXP 687
PP TG + P P P AP P P P PP+ T PK P P
Sbjct: 319 PPRTRFSTGSTPDTKQVTSPSPRPVQPSNAPPPPPPPPPPP-PPPPPPKLNTAPKPPPPP 377
Query: 688 XXTPA 702
P+
Sbjct: 378 PPPPS 382
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 29.1 bits (62), Expect = 5.5
Identities = 19/62 (30%), Positives = 21/62 (33%), Gaps = 3/62 (4%)
Frame = +1
Query: 478 GPGXAXAGSGXPPLXGGQTGXPXP---GENXGKPPXPXGXXKAPNGHXAPXXAPFPXXXP 648
GPG PP P P G N +PP P +P P P P P
Sbjct: 73 GPGPPQQQQPPPPPQMYYQPPPPPPPYGVNSSQPPPPPPPPPSPPPSAPPPPPPPPTQPP 132
Query: 649 PR 654
PR
Sbjct: 133 PR 134
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 29.1 bits (62), Expect = 5.5
Identities = 20/73 (27%), Positives = 23/73 (31%), Gaps = 1/73 (1%)
Frame = +1
Query: 481 PGXAXAGSGXPPLXGGQTGXPXPGENXGKPPXPXGXXKAPNGHXAPXXAPFPXXXPPRXX 660
PG GSG PP P P + PP P P P PP
Sbjct: 254 PGTLPNGSGGPPRPPPPQVPPPPPQAPPPPPPNAPMGMPPRIPPPPVGGTQPPPPPPPLA 313
Query: 661 T-HPKXLPXPXXT 696
P+ +P P T
Sbjct: 314 NGPPRSIPPPPMT 326
>06_01_0486 - 3455030-3455770
Length = 246
Score = 28.7 bits (61), Expect = 7.2
Identities = 24/84 (28%), Positives = 29/84 (34%), Gaps = 3/84 (3%)
Frame = +1
Query: 457 PPGX*RXGPGXAXAGSGXPPLXGGQTGXPXPGENXGKPPXPXGXXKAPNGHXA-PXXAPF 633
PPG G G G GG G P + KPP + P+ H P
Sbjct: 29 PPGSGSSGGGHHGKPPGSGSGGGGHHGKPPEHHHHHKPPP---SPRCPSCHPPYTPPTPR 85
Query: 634 PXXXPPRXXTHPKXLP--XPXXTP 699
P PP + P +P P TP
Sbjct: 86 PPPTPPYVPSPPPYVPPYIPPPTP 109
>05_07_0035 -
27221338-27221433,27221510-27221599,27222056-27222115,
27222231-27222523,27222601-27222757,27222917-27223261,
27223890-27224020,27224119-27224596,27224817-27225563
Length = 798
Score = 28.7 bits (61), Expect = 7.2
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = +2
Query: 503 AAXXHSXAXKRAPPNPGKTXENPRXQXAXXRPXTATXPPXXPPSP 637
A+ S RAPP P T P Q A PP PSP
Sbjct: 43 ASSSSSSGGNRAPPAPNPTRGAPWLQKWGPTDPAAPPPPPPAPSP 87
>04_02_0026 +
8708765-8710935,8711021-8711272,8711353-8711463,
8711553-8711634,8711909-8712100
Length = 935
Score = 28.7 bits (61), Expect = 7.2
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +2
Query: 536 APPNPGKTXENPRXQXAXXRPXTATXPPXXPPSPXXXXPAXXPTP 670
APP+P + +PR Q + + P PPSP P P P
Sbjct: 482 APPSPPEPP-SPRHQPSPPPLRSPPRQPTPPPSPSQQPPLPAPQP 525
>03_02_0155 -
5974118-5974173,5974242-5974314,5974393-5974500,
5975189-5976914,5977065-5977620,5978008-5978485
Length = 998
Score = 28.7 bits (61), Expect = 7.2
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = +1
Query: 541 PXPGENXGKPPXPXGXXKAPNGHXAPXXAPFPXXXPPRXXTHPKXLPXPXXTP 699
P PG PP P AP P P P PP + P P P P
Sbjct: 64 PMPGSLPPPPPRP--PSFAPENALPPSSPPPPSPPPPPPSSPPPVPPSPTAAP 114
>01_07_0239 +
42222024-42222133,42222220-42222301,42222396-42222486,
42222702-42222814,42222912-42222984,42223080-42223178,
42223201-42223406,42223693-42223832,42223912-42223969,
42224067-42224137,42224207-42224741
Length = 525
Score = 28.7 bits (61), Expect = 7.2
Identities = 25/91 (27%), Positives = 29/91 (31%), Gaps = 4/91 (4%)
Frame = +1
Query: 451 RGPPGX*RXGPGXAXAGSGXPPLXGGQTGX----PXPGENXGKPPXPXGXXKAPNGHXAP 618
RGP G R G G P GGQ G P P + G PP P G G
Sbjct: 424 RGPGGPNRYPQGGNQGGYN--PNRGGQGGGYGSGPYPQQGRGPPPYPGGGMGGAGGPRGG 481
Query: 619 XXAPFPXXXPPRXXTHPKXLPXPXXTPAKNR 711
+ + P P P P N+
Sbjct: 482 GGSGYGVGGPNYQQGGPYGASGPGRGPNYNQ 512
>01_07_0021 -
40533864-40534583,40534779-40534814,40534909-40535048,
40535837-40535922,40536430-40536653,40536770-40536865,
40538766-40538833,40539945-40540055,40540799-40540955
Length = 545
Score = 28.7 bits (61), Expect = 7.2
Identities = 14/43 (32%), Positives = 15/43 (34%)
Frame = +2
Query: 539 PPNPGKTXENPRXQXAXXRPXTATXPPXXPPSPXXXXPAXXPT 667
PP P E P P +T PP P S P PT
Sbjct: 420 PPLPSDAFEQPPPPPEHPPPPESTSPPPPPTSDPPPVPPPPPT 462
>01_06_0565 +
30287253-30287502,30287522-30289010,30289133-30289277,
30289679-30289729
Length = 644
Score = 28.7 bits (61), Expect = 7.2
Identities = 18/69 (26%), Positives = 21/69 (30%)
Frame = +1
Query: 412 PGXTSXEPXGXXXRGPPGX*RXGPGXAXAGSGXPPLXGGQTGXPXPGENXGKPPXPXGXX 591
P T P PG G G S PP T PG G P P
Sbjct: 179 PSDTPPSPSSDTSPTTPGG---GGGYTPTPSDAPPSPSSDTSPTTPGGGGGYTPTPSDAP 235
Query: 592 KAPNGHXAP 618
+P+ +P
Sbjct: 236 PSPSSDTSP 244
>08_01_0059 - 394001-394708
Length = 235
Score = 28.3 bits (60), Expect = 9.5
Identities = 17/63 (26%), Positives = 21/63 (33%)
Frame = +1
Query: 511 PPLXGGQTGXPXPGENXGKPPXPXGXXKAPNGHXAPXXAPFPXXXPPRXXTHPKXLPXPX 690
PP + P P PP P P+ P P P P +HP P P
Sbjct: 2 PPPPPPRRAPPPPAT---PPPPPRRAPPPPSPPIRPPPPPTPRPYAPPPPSHPLAPPPPH 58
Query: 691 XTP 699
+P
Sbjct: 59 ISP 61
>01_06_0823 + 32234588-32234936,32236354-32237093,32237260-32237343,
32237909-32239263,32240399-32240460,32240544-32241144,
32241229-32241310,32241778-32241840
Length = 1111
Score = 28.3 bits (60), Expect = 9.5
Identities = 14/44 (31%), Positives = 16/44 (36%)
Frame = +1
Query: 568 PPXPXGXXKAPNGHXAPXXAPFPXXXPPRXXTHPKXLPXPXXTP 699
PP P AP P P PP T P +P P +P
Sbjct: 965 PPPPPPPNVAPPPFTRQDIPPPPPSPPPLPITQPPSVPPPPNSP 1008
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.146 0.512
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,583,879
Number of Sequences: 37544
Number of extensions: 206530
Number of successful extensions: 1036
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 892
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2752963900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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