Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_C08
         (874 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    27   0.99 
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    27   0.99 
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    26   1.7  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    25   3.0  

>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 26.6 bits (56), Expect = 0.99
 Identities = 14/37 (37%), Positives = 15/37 (40%)
 Frame = -3

Query: 872 GGNGXXGRXGGDGXRXXGGVXGPGVMTHXDNPGXQRG 762
           GG G  G  G  G R   G  GP  M   D    +RG
Sbjct: 405 GGEGRPGAPGPKGPRGYEGPQGPKGMDGFDGEKGERG 441


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 26.6 bits (56), Expect = 0.99
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +1

Query: 808 PXTPPSXRXPSPPXRPXXPFP 870
           P TPP+ R P+PP  P    P
Sbjct: 794 PFTPPTDRTPTPPPLPATAEP 814


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 12/46 (26%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
 Frame = +2

Query: 167 IKNVAERLQIGSGAKSEFCNSCFSGTG---SPNKTGNFIHRSLHKQ 295
           ++   +R+  G G   ++CN  F G        K+ +  HR+LH +
Sbjct: 74  VRQFKDRIAEGEGLFYQYCNLVFGGWDFCIHNQKSADIKHRALHNE 119


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 12/35 (34%), Positives = 15/35 (42%)
 Frame = -3

Query: 872 GGNGXXGRXGGDGXRXXGGVXGPGVMTHXDNPGXQ 768
           GG+G  G  GG+     GG  G G      N G +
Sbjct: 722 GGDGGCGSIGGEVGSVGGGGGGGGSSVRDGNNGGE 756


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 755,606
Number of Sequences: 2352
Number of extensions: 14650
Number of successful extensions: 30
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93439926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)