Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_C08
(874 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U12966-1|AAA20615.3| 510|Caenorhabditis elegans Aldehyde dehydr... 132 2e-31
AF106575-1|AAC78174.2| 537|Caenorhabditis elegans Aldehyde dehy... 124 8e-29
U12966-2|AAN63391.1| 422|Caenorhabditis elegans Aldehyde dehydr... 77 2e-14
Z68760-14|CAA92998.2| 908|Caenorhabditis elegans Hypothetical p... 63 3e-10
Z68748-13|CAA92957.2| 908|Caenorhabditis elegans Hypothetical p... 63 3e-10
Z81538-1|CAB04383.1| 569|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U46673-3|AAC48151.1| 506|Caenorhabditis elegans Aldehyde dehydr... 43 2e-04
Z49127-3|CAA88946.1| 523|Caenorhabditis elegans Hypothetical pr... 35 0.087
AC006814-2|AAP46269.1| 430|Caenorhabditis elegans Aldehyde dehy... 34 0.12
AC006814-1|AAP46268.1| 499|Caenorhabditis elegans Aldehyde dehy... 34 0.12
Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.1
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.1
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 30 1.9
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical p... 29 3.3
Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical p... 29 3.3
AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical... 29 3.3
AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical... 29 3.3
AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin ... 29 3.3
AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin ... 29 3.3
AF003389-4|AAN63407.1| 598|Caenorhabditis elegans Hypothetical ... 29 5.7
AF003389-3|AAC71136.1| 1003|Caenorhabditis elegans Hypothetical ... 29 5.7
AC024214-13|AAM97984.1| 296|Caenorhabditis elegans Collagen pro... 29 5.7
Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical pr... 28 7.6
U28741-6|AAO21428.1| 942|Caenorhabditis elegans Synapse defecti... 28 7.6
U28741-5|AAO38644.1| 987|Caenorhabditis elegans Synapse defecti... 28 7.6
AF546880-1|AAN38752.1| 942|Caenorhabditis elegans axon identity... 28 7.6
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 28 7.6
>U12966-1|AAA20615.3| 510|Caenorhabditis elegans Aldehyde
dehydrogenase protein1, isoform a protein.
Length = 510
Score = 132 bits (320), Expect = 2e-31
Identities = 72/167 (43%), Positives = 90/167 (53%), Gaps = 1/167 (0%)
Frame = +3
Query: 273 YTGLFINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPWRT 452
YTG+FINNE+V + GKTF+T NPANG+V+A+V F++GS WR
Sbjct: 29 YTGIFINNEFVPAKSGKTFETINPANGKVLAQVAEGDKTDVNIAVKAAQNAFRIGSEWRR 88
Query: 453 MDASERGALINKLADLIERDXTYLASLXTLDNGKPYKDSYFGDXXASXXNLXVLRR-VGR 629
MDAS+RG L+N+LADL+ERD LASL +LDNGKPY +Y D S L +
Sbjct: 89 MDASQRGVLLNRLADLMERDRVILASLESLDNGKPYAVAYNADLPLSIKTLRYYAGWADK 148
Query: 630 PHPRXCSARRXXXXXXXXXXSHWXVCGHIIPWNXPIXXAAXKLRPPL 770
H + VCG IIPWN P+ A KL P L
Sbjct: 149 NHGKTIPIE--GDYFTYTRHEPVGVCGQIIPWNFPLLMQAWKLGPAL 193
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +1
Query: 598 KTYXYYAGWADHIHGXVLPAAXXILCXHSSPATGXC 705
KT YYAGWAD HG +P G C
Sbjct: 137 KTLRYYAGWADKNHGKTIPIEGDYFTYTRHEPVGVC 172
>AF106575-1|AAC78174.2| 537|Caenorhabditis elegans Aldehyde
dehydrogenase protein 2 protein.
Length = 537
Score = 124 bits (299), Expect = 8e-29
Identities = 69/164 (42%), Positives = 86/164 (52%), Gaps = 1/164 (0%)
Frame = +3
Query: 282 LFINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPWRTMDA 461
LFINNE+V + GKTF+ NPANG+++A+V FK+GS WR MDA
Sbjct: 59 LFINNEFVDAKSGKTFEFVNPANGKLLAKVAEGNRDDVDIAVEAAKKAFKIGSEWRRMDA 118
Query: 462 SERGALINKLADLIERDXTYLASLXTLDNGKPYKDSYFGDXXASXXNLXVLR-RVGRPHP 638
S RG L+N+LADL+ERD LASL +LDNGKPYK++Y D S + H
Sbjct: 119 SHRGVLLNRLADLMERDRVILASLESLDNGKPYKEAYNIDLPISIKTFRYYAGYADKNHG 178
Query: 639 RXCSARRXXXXXXXXXXSHWXVCGHIIPWNXPIXXAAXKLRPPL 770
+ VCG IIPWN P+ A KL P L
Sbjct: 179 KTIPV--GGDYFTYTRHEPVGVCGQIIPWNFPLLMQAWKLAPAL 220
Score = 31.9 bits (69), Expect = 0.62
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +1
Query: 598 KTYXYYAGWADHIHGXVLPAAXXILCXHSSPATGXC 705
KT+ YYAG+AD HG +P G C
Sbjct: 164 KTFRYYAGYADKNHGKTIPVGGDYFTYTRHEPVGVC 199
>U12966-2|AAN63391.1| 422|Caenorhabditis elegans Aldehyde
dehydrogenase protein1, isoform b protein.
Length = 422
Score = 76.6 bits (180), Expect = 2e-14
Identities = 45/107 (42%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Frame = +3
Query: 453 MDASERGALINKLADLIERDXTYLASLXTLDNGKPYKDSYFGDXXASXXNLXVLRR-VGR 629
MDAS+RG L+N+LADL+ERD LASL +LDNGKPY +Y D S L +
Sbjct: 1 MDASQRGVLLNRLADLMERDRVILASLESLDNGKPYAVAYNADLPLSIKTLRYYAGWADK 60
Query: 630 PHPRXCSARRXXXXXXXXXXSHWXVCGHIIPWNXPIXXAAXKLRPPL 770
H + VCG IIPWN P+ A KL P L
Sbjct: 61 NHGKTIPIE--GDYFTYTRHEPVGVCGQIIPWNFPLLMQAWKLGPAL 105
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +1
Query: 598 KTYXYYAGWADHIHGXVLPAAXXILCXHSSPATGXC 705
KT YYAGWAD HG +P G C
Sbjct: 49 KTLRYYAGWADKNHGKTIPIEGDYFTYTRHEPVGVC 84
>Z68760-14|CAA92998.2| 908|Caenorhabditis elegans Hypothetical
protein F36H1.6 protein.
Length = 908
Score = 62.9 bits (146), Expect = 3e-10
Identities = 37/92 (40%), Positives = 49/92 (53%)
Frame = +3
Query: 285 FINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPWRTMDAS 464
FI+ ++V SSDG+TFKT NPA + I E+ F+ G WR M A
Sbjct: 431 FIDGKFVGSSDGRTFKTINPATEKPICELPLATVADVDRAVRAAKKAFERGE-WRQMSAR 489
Query: 465 ERGALINKLADLIERDXTYLASLXTLDNGKPY 560
ERG + KLA+L+E LA+L +LD G Y
Sbjct: 490 ERGKRLYKLAELMEEHKEELATLESLDAGAVY 521
>Z68748-13|CAA92957.2| 908|Caenorhabditis elegans Hypothetical
protein F36H1.6 protein.
Length = 908
Score = 62.9 bits (146), Expect = 3e-10
Identities = 37/92 (40%), Positives = 49/92 (53%)
Frame = +3
Query: 285 FINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPWRTMDAS 464
FI+ ++V SSDG+TFKT NPA + I E+ F+ G WR M A
Sbjct: 431 FIDGKFVGSSDGRTFKTINPATEKPICELPLATVADVDRAVRAAKKAFERGE-WRQMSAR 489
Query: 465 ERGALINKLADLIERDXTYLASLXTLDNGKPY 560
ERG + KLA+L+E LA+L +LD G Y
Sbjct: 490 ERGKRLYKLAELMEEHKEELATLESLDAGAVY 521
>Z81538-1|CAB04383.1| 569|Caenorhabditis elegans Hypothetical
protein F45H10.1 protein.
Length = 569
Score = 44.4 bits (100), Expect = 1e-04
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
Frame = +3
Query: 285 FINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPW-RTMDA 461
+I +W S G +F NP N +V+ + F W T A
Sbjct: 21 YIGGKWTASETGNSFDVLNPFNNEVVDRATNCTVKDAEKAVHSALEGF---DKWAHTYSA 77
Query: 462 SERGALINKLADLIERDXTYLASLXTLDNGKPYKDS 569
+RGA+++K +++ + T LA+L T + GKP ++
Sbjct: 78 KQRGAILHKWFEILVQRETELATLLTKEQGKPLAEA 113
>U46673-3|AAC48151.1| 506|Caenorhabditis elegans Aldehyde
dehydrogenase protein 10 protein.
Length = 506
Score = 43.2 bits (97), Expect = 2e-04
Identities = 40/164 (24%), Positives = 59/164 (35%), Gaps = 2/164 (1%)
Frame = +3
Query: 285 FINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPWRTMDAS 464
FI NE+ +S K + NP+ G+ ++ FK W+
Sbjct: 31 FIGNEFARSE--KLMDSVNPSTGKPWIKIPDGTAREVDQAVEAAKEAFKT---WKKTTVQ 85
Query: 465 ERGALINKLADLIERDXTYLASLXTLDNGKPYKDSYFGDXXASXXNLXVLRRVGRPHPRX 644
+R AL+NK+A+LIE +A L + D GKP + D N
Sbjct: 86 QRSALLNKVANLIEEFNDDIAILESRDQGKPIGLAKVMDIPRCVQNFRDFANAALYSLST 145
Query: 645 CSARRXXXXXXXXXXSH--WXVCGHIIPWNXPIXXAAXKLRPPL 770
+ + V G I PWN P+ + KL P L
Sbjct: 146 STILEQPTGKFVNYVKNDPVGVAGLISPWNLPLYLLSFKLAPAL 189
>Z49127-3|CAA88946.1| 523|Caenorhabditis elegans Hypothetical
protein F13D12.4a protein.
Length = 523
Score = 34.7 bits (76), Expect = 0.087
Identities = 26/96 (27%), Positives = 40/96 (41%)
Frame = +3
Query: 282 LFINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPWRTMDA 461
L+I+ + V+S + NPA +VIA V + F + W+
Sbjct: 32 LWIDGQAVESKTTDFVELTNPATNEVIAMVPNATQAEMQAAVDSAKNAF---NTWKNTSP 88
Query: 462 SERGALINKLADLIERDXTYLASLXTLDNGKPYKDS 569
R + KL LI+RD LA T++ GK D+
Sbjct: 89 LTRQQCMFKLQALIKRDMKKLAESITIEQGKTLPDA 124
>AC006814-2|AAP46269.1| 430|Caenorhabditis elegans Aldehyde
dehydrogenase protein12, isoform b protein.
Length = 430
Score = 34.3 bits (75), Expect = 0.12
Identities = 41/174 (23%), Positives = 58/174 (33%), Gaps = 12/174 (6%)
Frame = +3
Query: 285 FINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPWRTMDAS 464
F+N + +TF P GQV+A+ S W A
Sbjct: 15 FLNGKRTTIESTETFDVIEPRIGQVVAKCPKATADIVDQYVKAAADA---QSAWGETTAL 71
Query: 465 ERGALINKLADLIERDXTYLASLXTLDNGKPYKDS------------YFGDXXASXXNLX 608
+RG +++K+ADLI +A NGKP ++ +FG +
Sbjct: 72 DRGKVLHKVADLIREHAEEIAIWEVKTNGKPIYEARCDIASSADTFDFFGGIATAVLQGD 131
Query: 609 VLRRVGRPHPRXCSARRXXXXXXXXXXSHWXVCGHIIPWNXPIXXAAXKLRPPL 770
L G P R RR + V G I WN P K+ P L
Sbjct: 132 SLELPGGPSQRIAYTRR----------EPYGVVGCIGAWNYPFQTCVWKVAPAL 175
>AC006814-1|AAP46268.1| 499|Caenorhabditis elegans Aldehyde
dehydrogenase protein12, isoform a protein.
Length = 499
Score = 34.3 bits (75), Expect = 0.12
Identities = 41/174 (23%), Positives = 58/174 (33%), Gaps = 12/174 (6%)
Frame = +3
Query: 285 FINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPWRTMDAS 464
F+N + +TF P GQV+A+ S W A
Sbjct: 15 FLNGKRTTIESTETFDVIEPRIGQVVAKCPKATADIVDQYVKAAADA---QSAWGETTAL 71
Query: 465 ERGALINKLADLIERDXTYLASLXTLDNGKPYKDS------------YFGDXXASXXNLX 608
+RG +++K+ADLI +A NGKP ++ +FG +
Sbjct: 72 DRGKVLHKVADLIREHAEEIAIWEVKTNGKPIYEARCDIASSADTFDFFGGIATAVLQGD 131
Query: 609 VLRRVGRPHPRXCSARRXXXXXXXXXXSHWXVCGHIIPWNXPIXXAAXKLRPPL 770
L G P R RR + V G I WN P K+ P L
Sbjct: 132 SLELPGGPSQRIAYTRR----------EPYGVVGCIGAWNYPFQTCVWKVAPAL 175
>Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical
protein F33A8.9 protein.
Length = 346
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Frame = +1
Query: 736 YXXPLXSSGPLXXPGLSXXVITPGPXTPPSXRXPS-PPXRPXXPFPP 873
+ P SGP PG TPGP P + S PP P P PP
Sbjct: 200 FDCPPARSGPPGPPGPKGPRGTPGPTGPKNFYITSGPPGPPGPPGPP 246
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 802 PGPXTPPSXRXPSPPXRPXXPFPP 873
P P PP R P PP P P PP
Sbjct: 297 PPPPPPPPGRTPGPPGMPGMPPPP 320
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 802 PGPXTPPSXRXPSPPXRPXXPFPP 873
P P PP R P PP P P PP
Sbjct: 307 PPPPPPPPGRTPGPPGMPGMPPPP 330
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Frame = +1
Query: 763 PLXXPGLSXXVITPGPXTPPSXRXPSPPXRP--XXPFPP 873
P P S PGP PP+ R P PP P P PP
Sbjct: 234 PSDEPSPSDPPGPPGPPGPPTRRPPGPPGPPTRRPPGPP 272
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = +1
Query: 745 PLXSSGPLXXPGLSXXVITPGPXTPPSXRXPSPPXRP 855
P GP PG PGP PP+ R P PP P
Sbjct: 240 PSDPPGPPGPPGPPTRR-PPGPPGPPTRRPPGPPGPP 275
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.9 bits (64), Expect = 2.5
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1
Query: 808 PXTPPSXRXPSPPXRPXXPFPP 873
P TPPS +PP P P PP
Sbjct: 172 PRTPPSPEPRNPPRTPPSPIPP 193
>Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical
protein JC8.10b protein.
Length = 1119
Score = 29.5 bits (63), Expect = 3.3
Identities = 22/86 (25%), Positives = 33/86 (38%)
Frame = +1
Query: 616 AGWADHIHGXVLPAAXXILCXHSSPATGXCAVTSYHGTSLYXXPLXSSGPLXXPGLSXXV 795
+ W +H+ P + + SP C + ++ P S+ PL P
Sbjct: 1038 SSWYEHVPPLAPPQSNN----NKSPPQA-CLFNPFTQSAPSPAPPPSTIPL--PPTRGAS 1090
Query: 796 ITPGPXTPPSXRXPSPPXRPXXPFPP 873
+ PGP P + P PP RP P P
Sbjct: 1091 VGPGPPAVPVRKAPPPPPRPVIPPRP 1116
>Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical
protein JC8.10a protein.
Length = 1113
Score = 29.5 bits (63), Expect = 3.3
Identities = 22/86 (25%), Positives = 33/86 (38%)
Frame = +1
Query: 616 AGWADHIHGXVLPAAXXILCXHSSPATGXCAVTSYHGTSLYXXPLXSSGPLXXPGLSXXV 795
+ W +H+ P + + SP C + ++ P S+ PL P
Sbjct: 1032 SSWYEHVPPLAPPQSNN----NKSPPQA-CLFNPFTQSAPSPAPPPSTIPL--PPTRGAS 1084
Query: 796 ITPGPXTPPSXRXPSPPXRPXXPFPP 873
+ PGP P + P PP RP P P
Sbjct: 1085 VGPGPPAVPVRKAPPPPPRPVIPPRP 1110
>AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical
protein JC8.10b protein.
Length = 1119
Score = 29.5 bits (63), Expect = 3.3
Identities = 22/86 (25%), Positives = 33/86 (38%)
Frame = +1
Query: 616 AGWADHIHGXVLPAAXXILCXHSSPATGXCAVTSYHGTSLYXXPLXSSGPLXXPGLSXXV 795
+ W +H+ P + + SP C + ++ P S+ PL P
Sbjct: 1038 SSWYEHVPPLAPPQSNN----NKSPPQA-CLFNPFTQSAPSPAPPPSTIPL--PPTRGAS 1090
Query: 796 ITPGPXTPPSXRXPSPPXRPXXPFPP 873
+ PGP P + P PP RP P P
Sbjct: 1091 VGPGPPAVPVRKAPPPPPRPVIPPRP 1116
>AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical
protein JC8.10a protein.
Length = 1113
Score = 29.5 bits (63), Expect = 3.3
Identities = 22/86 (25%), Positives = 33/86 (38%)
Frame = +1
Query: 616 AGWADHIHGXVLPAAXXILCXHSSPATGXCAVTSYHGTSLYXXPLXSSGPLXXPGLSXXV 795
+ W +H+ P + + SP C + ++ P S+ PL P
Sbjct: 1032 SSWYEHVPPLAPPQSNN----NKSPPQA-CLFNPFTQSAPSPAPPPSTIPL--PPTRGAS 1084
Query: 796 ITPGPXTPPSXRXPSPPXRPXXPFPP 873
+ PGP P + P PP RP P P
Sbjct: 1085 VGPGPPAVPVRKAPPPPPRPVIPPRP 1110
>AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin
UNC-26B protein.
Length = 1113
Score = 29.5 bits (63), Expect = 3.3
Identities = 22/86 (25%), Positives = 33/86 (38%)
Frame = +1
Query: 616 AGWADHIHGXVLPAAXXILCXHSSPATGXCAVTSYHGTSLYXXPLXSSGPLXXPGLSXXV 795
+ W +H+ P + + SP C + ++ P S+ PL P
Sbjct: 1032 SSWYEHVPPLAPPQSNN----NKSPPQA-CLFNPFTQSAPSPAPPPSTIPL--PPTRGAS 1084
Query: 796 ITPGPXTPPSXRXPSPPXRPXXPFPP 873
+ PGP P + P PP RP P P
Sbjct: 1085 VGPGPPAVPVRKAPPPPPRPVIPPRP 1110
>AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin
UNC-26A protein.
Length = 1119
Score = 29.5 bits (63), Expect = 3.3
Identities = 22/86 (25%), Positives = 33/86 (38%)
Frame = +1
Query: 616 AGWADHIHGXVLPAAXXILCXHSSPATGXCAVTSYHGTSLYXXPLXSSGPLXXPGLSXXV 795
+ W +H+ P + + SP C + ++ P S+ PL P
Sbjct: 1038 SSWYEHVPPLAPPQSNN----NKSPPQA-CLFNPFTQSAPSPAPPPSTIPL--PPTRGAS 1090
Query: 796 ITPGPXTPPSXRXPSPPXRPXXPFPP 873
+ PGP P + P PP RP P P
Sbjct: 1091 VGPGPPAVPVRKAPPPPPRPVIPPRP 1116
>AF003389-4|AAN63407.1| 598|Caenorhabditis elegans Hypothetical
protein F23H11.4b protein.
Length = 598
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +1
Query: 775 PGLSXXVITPGPXTPPSXRXPSPPXRPXXP 864
PG+ ++PG P R PP RP P
Sbjct: 63 PGIGFIEVSPGTSMSPPQRHAPPPPRPPPP 92
>AF003389-3|AAC71136.1| 1003|Caenorhabditis elegans Hypothetical
protein F23H11.4a protein.
Length = 1003
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +1
Query: 775 PGLSXXVITPGPXTPPSXRXPSPPXRPXXP 864
PG+ ++PG P R PP RP P
Sbjct: 63 PGIGFIEVSPGTSMSPPQRHAPPPPRPPPP 92
>AC024214-13|AAM97984.1| 296|Caenorhabditis elegans Collagen
protein 106 protein.
Length = 296
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 4/42 (9%)
Frame = -3
Query: 872 GGNGXXGRXGGDGXRXXGGVXG----PGVMTHXDNPGXQRGP 759
G NG G+ G DG GG G PGV PG P
Sbjct: 225 GANGKNGKQGADGIPGAGGAPGQHGVPGVDGSDGAPGEDAAP 266
>Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical
protein B0393.4 protein.
Length = 803
Score = 28.3 bits (60), Expect = 7.6
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 814 TPPSXRXPSPPXRPXXPFPP 873
TPP PS P RP P PP
Sbjct: 41 TPPPSVEPSSPTRPSEPIPP 60
>U28741-6|AAO21428.1| 942|Caenorhabditis elegans Synapse defective
protein 1, isoformb protein.
Length = 942
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/62 (27%), Positives = 25/62 (40%)
Frame = +3
Query: 447 RTMDASERGALINKLADLIERDXTYLASLXTLDNGKPYKDSYFGDXXASXXNLXVLRRVG 626
RT+ + RG L+ +L ++I++ L NGK D F L V
Sbjct: 41 RTLSSEPRGDLVFQLVEIIKKPGQSLGLYLREGNGKDRSDGVFVSRFGDNSELAKYGEVM 100
Query: 627 RP 632
RP
Sbjct: 101 RP 102
>U28741-5|AAO38644.1| 987|Caenorhabditis elegans Synapse defective
protein 1, isoforma protein.
Length = 987
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/62 (27%), Positives = 25/62 (40%)
Frame = +3
Query: 447 RTMDASERGALINKLADLIERDXTYLASLXTLDNGKPYKDSYFGDXXASXXNLXVLRRVG 626
RT+ + RG L+ +L ++I++ L NGK D F L V
Sbjct: 109 RTLSSEPRGDLVFQLVEIIKKPGQSLGLYLREGNGKDRSDGVFVSRFGDNSELAKYGEVM 168
Query: 627 RP 632
RP
Sbjct: 169 RP 170
>AF546880-1|AAN38752.1| 942|Caenorhabditis elegans axon identity
specification proteinSYD-1 protein.
Length = 942
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/62 (27%), Positives = 25/62 (40%)
Frame = +3
Query: 447 RTMDASERGALINKLADLIERDXTYLASLXTLDNGKPYKDSYFGDXXASXXNLXVLRRVG 626
RT+ + RG L+ +L ++I++ L NGK D F L V
Sbjct: 41 RTLSSEPRGDLVFQLVEIIKKPGQSLGLYLREGNGKDRSDGVFVSRFGDNSELAKYGEVM 100
Query: 627 RP 632
RP
Sbjct: 101 RP 102
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 28.3 bits (60), Expect = 7.6
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1
Query: 799 TPGPXTPPSXRXPSPPXRPXXPFPP 873
+PG +PP R P P R PF P
Sbjct: 126 SPGRRSPPRSRLPGPERRDVMPFNP 150
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,365,491
Number of Sequences: 27780
Number of extensions: 324814
Number of successful extensions: 1219
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1163
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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