Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_B18
         (873 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.             268   3e-74
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    25   0.69 
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          22   6.4  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   6.4  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    22   8.5  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    22   8.5  

>AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.
          Length = 133

 Score =  268 bits (658), Expect = 3e-74
 Identities = 125/133 (93%), Positives = 131/133 (98%)
 Frame = +2

Query: 233 EMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKC 412
           EMATAA+S+SLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME+CGIHET YNSIMKC
Sbjct: 1   EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKC 60

Query: 413 DVDIRKDLYANTVMSGGTTMYPGIADRMQKEITXLAPSTIKIKIIAPPERKYSVWIGGSI 592
           DVDIRKDLYANTV+SGGTTMYPGIADRMQKEIT LAPST+KIKIIAPPE+KYSVWIGGSI
Sbjct: 61  DVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPEKKYSVWIGGSI 120

Query: 593 LASLSTFQQMWIS 631
           LASLSTFQQMWIS
Sbjct: 121 LASLSTFQQMWIS 133


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 25.4 bits (53), Expect = 0.69
 Identities = 21/62 (33%), Positives = 30/62 (48%)
 Frame = +2

Query: 395 NSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITXLAPSTIKIKIIAPPERKYSV 574
           N  +K D DI++  Y + V      MYP  +  M+K I+    +  KI I  P E K  +
Sbjct: 342 NKELKYD-DIKEMEYLDKVFKETLRMYPPASILMRKAISDYTFNDTKITI--PKEMK--I 396

Query: 575 WI 580
           WI
Sbjct: 397 WI 398


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 10/32 (31%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
 Frame = -1

Query: 426 RMSTSHFMMELYT--VSWMPHDSIPRKEGWKR 337
           R     F+  L T    W+ +++I RK  W R
Sbjct: 18  RSENDPFLKRLITGDEKWVVYNNIKRKRSWSR 49


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = -3

Query: 199 LLDVTNDFPLSGGGERVTPLGEDLHEVVGQVATSQVQTEDGVGQS 65
           ++D+T     S  G+ V     +L+ +VG  A   +  E+G G +
Sbjct: 18  MVDLTQCLQESSTGQSVEFSPMELNALVGTPAAPNMPAEEGEGMA 62


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 10/32 (31%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
 Frame = -1

Query: 426 RMSTSHFMMELYT--VSWMPHDSIPRKEGWKR 337
           R     F+  L T    W+ +++I RK  W R
Sbjct: 139 RNENDPFLKRLITGDEKWVVYNNIKRKRSWSR 170


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +1

Query: 394 QLHHEVRRRHP*GPVRQHRH 453
           Q+HH++  +HP    +Q +H
Sbjct: 167 QMHHQMHTQHPHMQPQQGQH 186


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,116
Number of Sequences: 438
Number of extensions: 4329
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28280841
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)