Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_B08
         (860 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0873 - 32372143-32372287,32372678-32372754,32372863-323730...    40   0.003

>02_05_0873 -
           32372143-32372287,32372678-32372754,32372863-32373072,
           32374645-32374869
          Length = 218

 Score = 39.9 bits (89), Expect = 0.003
 Identities = 29/121 (23%), Positives = 55/121 (45%)
 Frame = +3

Query: 138 YFHIAEGXRKCFIEEIPDDTTVIVNYKVELYDPKSGGFMQTTPGIGXHVEVRDPNDRILL 317
           +  + +   KC  EEI  +  V+ +Y + +Y+        + P I   V+V  P    L 
Sbjct: 33  WLDLPQSGTKCVSEEIQSNVVVLADYAL-MYE----SHPSSHPTIA--VKVTSPYGNTLH 85

Query: 318 SRVYSLEGMISFTSXTPGEHVICMYSNSTSWFSGSXLRVHLDIQVGXHAVXYANVAXKXK 497
               +  G  +FT+   G ++ C + +S     GS + ++LD ++G  A  +  +A K K
Sbjct: 86  HNENATVGQFAFTTSEAGNYLACFWIDSAE--KGSGISINLDWKIGIAAKDWDVIAKKEK 143

Query: 498 L 500
           +
Sbjct: 144 I 144


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,385,759
Number of Sequences: 37544
Number of extensions: 237124
Number of successful extensions: 463
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 462
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2409218220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)