Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_B08
         (860 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL117207-7|CAB60397.1|  211|Caenorhabditis elegans Hypothetical ...   175   3e-44
AC199170-2|ABO33261.1|  167|Caenorhabditis elegans Hypothetical ...   170   1e-42
Z74035-1|CAA98480.1|  204|Caenorhabditis elegans Hypothetical pr...    29   5.6  

>AL117207-7|CAB60397.1|  211|Caenorhabditis elegans Hypothetical
           protein Y60A3A.9 protein.
          Length = 211

 Score =  175 bits (427), Expect = 3e-44
 Identities = 78/123 (63%), Positives = 96/123 (78%)
 Frame = +3

Query: 138 YFHIAEGXRKCFIEEIPDDTTVIVNYKVELYDPKSGGFMQTTPGIGXHVEVRDPNDRILL 317
           YFHIAE  +KCFIEEIPD+T V  NYKV+LYDP + G+    P IG HVEV+DP D+++L
Sbjct: 18  YFHIAETEKKCFIEEIPDETMVTGNYKVQLYDPNTKGYGDY-PNIGMHVEVKDPEDKVIL 76

Query: 318 SRVYSLEGMISFTSXTPGEHVICMYSNSTSWFSGSXLRVHLDIQVGXHAVXYANVAXKXK 497
           S++Y+ EG  +FTS TPGEHVIC+YSNST+WF+G+ LRVHLDIQ G HA  YA +A K K
Sbjct: 77  SKLYTAEGRFTFTSNTPGEHVICIYSNSTAWFNGAQLRVHLDIQAGDHAQDYAQIAQKDK 136

Query: 498 LTE 506
           L E
Sbjct: 137 LNE 139


>AC199170-2|ABO33261.1|  167|Caenorhabditis elegans Hypothetical
           protein T08D2.1 protein.
          Length = 167

 Score =  170 bits (414), Expect = 1e-42
 Identities = 76/123 (61%), Positives = 95/123 (77%)
 Frame = +3

Query: 138 YFHIAEGXRKCFIEEIPDDTTVIVNYKVELYDPKSGGFMQTTPGIGXHVEVRDPNDRILL 317
           YFHIAE  +KCFIEEIPD+T V  NYKV+LYDP + G+    P IG HVEV+DP D+++L
Sbjct: 18  YFHIAETEKKCFIEEIPDETMVTGNYKVQLYDPNTKGYGDY-PNIGMHVEVKDPEDKVIL 76

Query: 318 SRVYSLEGMISFTSXTPGEHVICMYSNSTSWFSGSXLRVHLDIQVGXHAVXYANVAXKXK 497
           S++Y+ EG  +FTS TPGEHVIC+YSN+T+WF+G+ LRVHLDIQ G HA  YA V  + K
Sbjct: 77  SKLYTSEGRFTFTSNTPGEHVICIYSNTTAWFNGAQLRVHLDIQAGDHAQDYAQVEEERK 136

Query: 498 LTE 506
           L E
Sbjct: 137 LDE 139


>Z74035-1|CAA98480.1|  204|Caenorhabditis elegans Hypothetical
           protein F47G9.1 protein.
          Length = 204

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 30/122 (24%), Positives = 47/122 (38%), Gaps = 2/122 (1%)
 Frame = +3

Query: 141 FHIAEGXRKCFIEEIPDDTTVIVNYKVELYDPKSGGFMQTTPGIGXHVEVRDPNDRILLS 320
           F++    +KC  EEI  +  V   Y+       S G   T       + V D     L  
Sbjct: 19  FYVPPKEKKCLKEEIHKNVVVTGEYEF------SQGIQYT-----GSIHVTDTRGHTLYK 67

Query: 321 R--VYSLEGMISFTSXTPGEHVICMYSNSTSWFSGSXLRVHLDIQVGXHAVXYANVAXKX 494
           R     L+G  +FT+       IC+ ++  +   G    V L ++ G  A  Y ++A   
Sbjct: 68  RENFADLKGKFAFTADEYDIFEICIENHPPAGHPGEKREVSLILKHGVEAKNYDDIAKAE 127

Query: 495 KL 500
           KL
Sbjct: 128 KL 129


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,580,264
Number of Sequences: 27780
Number of extensions: 199879
Number of successful extensions: 342
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 331
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 340
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)