Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_B07
         (863 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC108676-1|AAI08677.1|  445|Homo sapiens hypothetical protein LO...    95   3e-19
AK131284-1|BAD18458.1|  445|Homo sapiens protein ( Homo sapiens ...    95   3e-19

>BC108676-1|AAI08677.1|  445|Homo sapiens hypothetical protein
           LOC392636 protein.
          Length = 445

 Score = 95.1 bits (226), Expect = 3e-19
 Identities = 44/105 (41%), Positives = 64/105 (60%), Gaps = 1/105 (0%)
 Frame = +1

Query: 319 KGVGXLFYINSPQDSMFEKKDDVPNFFKQSWPYFFIFMILEXIVLR-LKGKPGVRLNDGI 495
           +G   LFY   P ++ F+  ++VP++ K++ P+F   M+LE +V   LKGKP  RL+D +
Sbjct: 14  QGFRMLFYTMKPSETSFQTLEEVPDYVKKATPFFISLMLLELVVSWILKGKPPGRLDDAL 73

Query: 496 TSISHGIFQECGRIIWRGAESYLYXWIYTNYRLVELPWDSTLTWY 630
           TSIS G+      + +R  E   Y +I+ NYRL  LPWDS  TWY
Sbjct: 74  TSISAGVLSRLPSLFFRSIELTSYIYIWENYRLFNLPWDSPWTWY 118



 Score = 66.1 bits (154), Expect = 2e-10
 Identities = 29/57 (50%), Positives = 36/57 (63%)
 Frame = +2

Query: 641 LGVDFCYYWMXRTCHEVHILWAQXQVXXTSXDFNMGVGXRXSVLQGWCGFIFYLPXA 811
           LGVDF YYW  R  HEV+I+WA  Q   +S D+N+    R SVLQ +  +IFY P A
Sbjct: 122 LGVDFGYYWFHRMAHEVNIMWAGHQTHHSSEDYNLSTALRQSVLQIYTSWIFYSPLA 178


>AK131284-1|BAD18458.1|  445|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16237 fis, clone HCASM2002754. ).
          Length = 445

 Score = 95.1 bits (226), Expect = 3e-19
 Identities = 44/105 (41%), Positives = 64/105 (60%), Gaps = 1/105 (0%)
 Frame = +1

Query: 319 KGVGXLFYINSPQDSMFEKKDDVPNFFKQSWPYFFIFMILEXIVLR-LKGKPGVRLNDGI 495
           +G   LFY   P ++ F+  ++VP++ K++ P+F   M+LE +V   LKGKP  RL+D +
Sbjct: 14  QGFRMLFYTMKPSETSFQTLEEVPDYVKKATPFFISLMLLELVVSWILKGKPPGRLDDAL 73

Query: 496 TSISHGIFQECGRIIWRGAESYLYXWIYTNYRLVELPWDSTLTWY 630
           TSIS G+      + +R  E   Y +I+ NYRL  LPWDS  TWY
Sbjct: 74  TSISAGVLSRLPSLFFRSIELTSYIYIWENYRLFNLPWDSPWTWY 118



 Score = 66.1 bits (154), Expect = 2e-10
 Identities = 29/57 (50%), Positives = 36/57 (63%)
 Frame = +2

Query: 641 LGVDFCYYWMXRTCHEVHILWAQXQVXXTSXDFNMGVGXRXSVLQGWCGFIFYLPXA 811
           LGVDF YYW  R  HEV+I+WA  Q   +S D+N+    R SVLQ +  +IFY P A
Sbjct: 122 LGVDFGYYWFHRMAHEVNIMWAGHQTHHSSEDYNLSTALRQSVLQIYTSWIFYSPLA 178


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,695,079
Number of Sequences: 237096
Number of extensions: 1610835
Number of successful extensions: 3654
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3625
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11039988564
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)