Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_B03
(891 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC14C4.14 |atp1||F1-ATPase alpha subunit|Schizosaccharomyces p... 81 3e-16
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 38 0.001
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 32 0.095
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 32 0.13
SPAC222.12c |atp2||F1-ATPase beta subunit |Schizosaccharomyces p... 31 0.22
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 28 1.6
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 3.6
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 26 6.3
>SPAC14C4.14 |atp1||F1-ATPase alpha subunit|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 536
Score = 80.6 bits (190), Expect = 3e-16
Identities = 50/114 (43%), Positives = 58/114 (50%)
Frame = +1
Query: 259 EISTILEERXLGAAPKADLEETGRVLSXGDGIARVYGLKXXQAEEXVXFSSRPXXXXXXX 438
E+ +ILEER GA +A + E+GRVLS GDGIAR+ GL QAEE V FSS
Sbjct: 35 EVPSILEERIRGAYNQAQMMESGRVLSIGDGIARISGLSNVQAEELVEFSSGIKGMALNL 94
Query: 439 XXXXXXXXXXW*XPAYPGXRXCQRTGAIVXVPVGXXILGRVXXALGXPXXGHGP 600
+RT IV VPVG +LGRV ALG P G GP
Sbjct: 95 EADTVGCVLFGNDRLVREGEVVKRTRHIVDVPVGEALLGRVVDALGNPIDGKGP 148
Score = 38.7 bits (86), Expect = 0.001
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +2
Query: 413 GLXGMALXLEPDXVGVVVFGNXQLIXXGDXV 505
G+ GMAL LE D VG V+FGN +L+ G+ V
Sbjct: 86 GIKGMALNLEADTVGCVLFGNDRLVREGEVV 116
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 38.3 bits (85), Expect = 0.001
Identities = 26/102 (25%), Positives = 29/102 (28%), Gaps = 1/102 (0%)
Frame = +2
Query: 578 PXXXATDXPPXIPXXGXYXXAXIPPPVXVPX-PXPTGXPXXXXPWXPXXPXPXXXXSXPX 754
P A P +P P V VP P P+G P P P P + P
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPV 1142
Query: 755 PXXXXXXXXXXXPXPXPPXPXXPPXXPPPXXXXXXXPPPXXP 880
P P PP P PP PP P
Sbjct: 1143 PKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKP 1184
Score = 35.1 bits (77), Expect = 0.014
Identities = 24/102 (23%), Positives = 28/102 (27%), Gaps = 3/102 (2%)
Frame = +2
Query: 590 ATDXPPXIPXXGXYXXAXIPPPVXVPXPXPTGXPXXXXPWXPXXPXPXXXXS---XPXPX 760
A PP +P + P P P P+G P P P P + P P
Sbjct: 1059 APSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPS 1118
Query: 761 XXXXXXXXXXPXPXPPXPXXPPXXPPPXXXXXXXPPPXXPXP 886
P P P P P P P P P
Sbjct: 1119 GAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPP 1160
Score = 33.9 bits (74), Expect = 0.031
Identities = 21/92 (22%), Positives = 24/92 (26%)
Frame = +2
Query: 605 PXIPXXGXYXXAXIPPPVXVPXPXPTGXPXXXXPWXPXXPXPXXXXSXPXPXXXXXXXXX 784
P +P P P P P+G P P P P + P P
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPV 1171
Query: 785 XXPXPXPPXPXXPPXXPPPXXXXXXXPPPXXP 880
P P P PP PP P
Sbjct: 1172 PAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKP 1203
Score = 33.5 bits (73), Expect = 0.041
Identities = 22/93 (23%), Positives = 25/93 (26%), Gaps = 1/93 (1%)
Frame = +2
Query: 605 PXIPXXGXYXXAXIPPPVXVPXPXPT-GXPXXXXPWXPXXPXPXXXXSXPXPXXXXXXXX 781
P +P P P P P+ G P P P P + P P
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPP 1209
Query: 782 XXXPXPXPPXPXXPPXXPPPXXXXXXXPPPXXP 880
P PP P PP PP P
Sbjct: 1210 VPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 32.7 bits (71), Expect = 0.072
Identities = 23/93 (24%), Positives = 25/93 (26%), Gaps = 1/93 (1%)
Frame = +2
Query: 605 PXIPXXGXYXXAXIPPPVXVPXPXPTGXPXXXXPWXPXXPXPXXXXS-XPXPXXXXXXXX 781
P +P P P P P+G P P P P P P
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPP 1190
Query: 782 XXXPXPXPPXPXXPPXXPPPXXXXXXXPPPXXP 880
P PP P P PP PP P
Sbjct: 1191 VPPPSEAPPVP-KPSVGVPPVPPPSTAPPVPTP 1222
Score = 29.9 bits (64), Expect = 0.51
Identities = 25/101 (24%), Positives = 27/101 (26%), Gaps = 6/101 (5%)
Frame = +2
Query: 602 PPXIPXXGXYXXAXIPPPVXVPXPXPTGXPXXXXPWXPXXPXP----XXXXSXPXPXXXX 769
PP +P PP P P P P P P + P P
Sbjct: 970 PPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSA 1029
Query: 770 XXXXXXXPXPXPPXPXXPPXXPPPXXXXXXXP--PPXXPXP 886
P PP P P PP P PP P P
Sbjct: 1030 DAPPIPVPSTAPPVP-IPTSTPPVPKSSSGAPSAPPPVPAP 1069
Score = 28.3 bits (60), Expect = 1.6
Identities = 24/105 (22%), Positives = 26/105 (24%), Gaps = 4/105 (3%)
Frame = +2
Query: 578 PXXXATDXPPXIPXXGXYXXAXIPPPVXVPXPXPTGXPXXXXP--WXPXXPXPXXXXSXP 751
P + P +P P P P PT P P P P S
Sbjct: 1013 PVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSE 1072
Query: 752 XPXXXXXXXXXXXPXP--XPPXPXXPPXXPPPXXXXXXXPPPXXP 880
P P P PP P PP PP P
Sbjct: 1073 IPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAP 1117
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 32.3 bits (70), Expect = 0.095
Identities = 22/95 (23%), Positives = 25/95 (26%), Gaps = 1/95 (1%)
Frame = +2
Query: 605 PXIPXXGXYXXAXIPPPVXVPX-PXPTGXPXXXXPWXPXXPXPXXXXSXPXPXXXXXXXX 781
P + G + PP P P P P P P P + P P
Sbjct: 110 PKLRHIGKSSASAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPS 169
Query: 782 XXXPXPXPPXPXXPPXXPPPXXXXXXXPPPXXPXP 886
P P P P P PP P P
Sbjct: 170 SLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.9 bits (69), Expect = 0.13
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 791 PXPXPPXPXXPPXXPPPXXXXXXXPPPXXPXP 886
P P P PP PPP PPP P P
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 27.1 bits (57), Expect = 3.6
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = +2
Query: 647 PPPVXVPXPXPTGXPXXXXPWXPXXPXPXXXXSXPXPXXXXXXXXXXXPXPXPPXP 814
PP V VP P P P P P P P P P PP P
Sbjct: 736 PPAVIVPTPAPAPIPV---------PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 26.2 bits (55), Expect = 6.3
Identities = 15/50 (30%), Positives = 15/50 (30%), Gaps = 4/50 (8%)
Frame = +2
Query: 749 PXPXXXXXXXXXXXPXPXPPXPXXP----PXXPPPXXXXXXXPPPXXPXP 886
P P P P P P P P PPP PP P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 26.2 bits (55), Expect = 6.3
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = +2
Query: 647 PPPVXVPXPXPTGXPXXXXPWXPXXPXPXXXXSXPXPXXXXXXXXXXXPXPXPPXP 814
PPP V P P P P P P P P P P PP P
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGP------PPPPPPPGVAGAGPPPPPPPPP 783
Score = 26.2 bits (55), Expect = 6.3
Identities = 12/38 (31%), Positives = 14/38 (36%)
Frame = +2
Query: 644 IPPPVXVPXPXPTGXPXXXXPWXPXXPXPXXXXSXPXP 757
+P P P P P P P P P P + P P
Sbjct: 741 VPTPAPAPIPVPPPAPIMGGP-PPPPPPPGVAGAGPPP 777
>SPAC222.12c |atp2||F1-ATPase beta subunit |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 525
Score = 31.1 bits (67), Expect = 0.22
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 511 TGAIVXVPVGXXILGRVXXALGXPXXGHGP 600
TG+ + +PVG LGR+ +G P GP
Sbjct: 125 TGSPISIPVGPGTLGRIMNVIGEPVDERGP 154
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 28.3 bits (60), Expect = 1.6
Identities = 25/94 (26%), Positives = 27/94 (28%)
Frame = +2
Query: 605 PXIPXXGXYXXAXIPPPVXVPXPXPTGXPXXXXPWXPXXPXPXXXXSXPXPXXXXXXXXX 784
P +P G PP V P P P P P P + P P
Sbjct: 401 PALPPLGNASRTSTPP-VPTPPSLPPSAPPSLPPSAP-PSLPMGAPAAP-PLPPSAPIAP 457
Query: 785 XXPXPXPPXPXXPPXXPPPXXXXXXXPPPXXPXP 886
P P P PP P P PP P P
Sbjct: 458 PLPAGMPAAPPLPPAAPAP-------PPAPAPAP 484
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.1 bits (57), Expect = 3.6
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +2
Query: 791 PXPXPPXPXXPPXXPPPXXXXXXXPPPXXP 880
P PP P PP PPP P P
Sbjct: 1717 PPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 26.2 bits (55), Expect = 6.3
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +2
Query: 791 PXPXPPXPXXPPXXPPPXXXXXXXPPPXXP 880
P P P PP PP PPP P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 26.2 bits (55), Expect = 6.3
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +2
Query: 812 PXXPPXXPPPXXXXXXXPPPXXPXP 886
P PP PPP PP P P
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +2
Query: 806 PXPXXPPXXPPPXXXXXXXPPPXXP 880
P PP PPP PPP P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 25.8 bits (54), Expect = 8.3
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +2
Query: 791 PXPXPPXPXXPPXXPPP 841
P P PP PP PPP
Sbjct: 10 PPPPPPPGFEPPSQPPP 26
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,103,293
Number of Sequences: 5004
Number of extensions: 32373
Number of successful extensions: 150
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 118
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 448490560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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