Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_B02
(866 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 32 0.092
SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||... 30 0.37
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 30 0.37
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 30 0.49
SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces po... 29 0.65
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 0.86
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 0.86
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 29 0.86
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 1.1
SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 28 1.5
SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase Wis4|Schizo... 27 4.6
SPAC29B12.10c |||OPT oligopeptide transporter family|Schizosacch... 26 6.0
SPBC776.14 |plh1||phospholipid-diacylglycerol acyltransferase Pl... 26 8.0
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 32.3 bits (70), Expect = 0.092
Identities = 29/126 (23%), Positives = 29/126 (23%), Gaps = 2/126 (1%)
Frame = +2
Query: 482 PPPXXPPXXPXXXXPXXXXXXXXXXXXXPXPPXXXX--PXPXXPXXXXXPXXXXPXXPXX 655
PPP P P P PP P P P P
Sbjct: 361 PPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTP 420
Query: 656 XXXPXXXXPXXPXXXPXXXPXPXXXXXPXXPXXXXXXXXPPXXXXPXXXPXPXPPXXPXP 835
P P P P P P P PP P P PP P P
Sbjct: 421 PSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIA---PPLPAGMPAAP-PLPPAAPAP 476
Query: 836 PXXXXP 853
P P
Sbjct: 477 PPAPAP 482
Score = 26.2 bits (55), Expect = 6.0
Identities = 12/31 (38%), Positives = 12/31 (38%), Gaps = 1/31 (3%)
Frame = +1
Query: 772 PXXPPXXXXXXXPPP-PPXPXXPPPXXXPXP 861
P PP PP PP PPP P P
Sbjct: 454 PIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
>SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1367
Score = 30.3 bits (65), Expect = 0.37
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 348 NFLRYSLLPTASTRERGRLEVRSALGTVHVICTVVDRFV 232
NF ++P STR+R + +R G +H+IC D +
Sbjct: 756 NFRVLDIIPFTSTRKRMSVIIRDEDGIIHLICKGADTVI 794
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 30.3 bits (65), Expect = 0.37
Identities = 14/34 (41%), Positives = 14/34 (41%), Gaps = 4/34 (11%)
Frame = +1
Query: 772 PXXPPXXXXXXXPPPPPXP----XXPPPXXXPXP 861
P PP PPPPP P PPP P P
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 26.2 bits (55), Expect = 6.0
Identities = 15/53 (28%), Positives = 15/53 (28%)
Frame = +1
Query: 682 PPXXXXXXXXXXXPXXXXPXXPXXXXXXXXPXXPPXXXXXXXPPPPPXPXXPP 840
PP P P P PP PPPPP P PP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP--PP 783
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.9 bits (64), Expect = 0.49
Identities = 23/88 (26%), Positives = 23/88 (26%)
Frame = +2
Query: 590 PXPXXPXXXXXPXXXXPXXPXXXXXPXXXXPXXPXXXPXXXPXPXXXXXPXXPXXXXXXX 769
P P P P P P P P P P P P P
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAP---PIPSSLPPPAQPAAPVKSP 184
Query: 770 XPPXXXXPXXXPXPXPPXXPXPPXXXXP 853
P P P P PP P PP P
Sbjct: 185 -PSAPSLPSAVP-PMPPKVPPPPLSQAP 210
>SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 658
Score = 29.5 bits (63), Expect = 0.65
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +2
Query: 143 PTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLS 307
PT++ T T ++ T T + +TTT+ + T + T T P + T+ LP++
Sbjct: 102 PTVETTTTPMVETT-TITPMVETTTITPMVEAMITLMEETMTTPMEETTTILPMA 155
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.1 bits (62), Expect = 0.86
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 808 PPPPPXPXXPPPXXXPXP 861
PPPPP PPP P P
Sbjct: 1707 PPPPPMSVPPPPSAPPMP 1724
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.1 bits (62), Expect = 0.86
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 808 PPPPPXPXXPPPXXXPXP 861
PPPPP P PP P P
Sbjct: 10 PPPPPPPGFEPPSQPPPP 27
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 29.1 bits (62), Expect = 0.86
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +2
Query: 161 ATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLSL 310
A+ L +++ T+ + P +T ET ++ S+ T T+ + TSS P+SL
Sbjct: 234 ASTLESSSLTNTVSPTESTFYETKSSTSSVP--TQTIDSSSFTSSTPVSL 281
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.7 bits (61), Expect = 1.1
Identities = 28/134 (20%), Positives = 28/134 (20%), Gaps = 4/134 (2%)
Frame = +2
Query: 467 PXXXXPPPXXPPXXPXXXXPXXXXXXXXXXXXXPX-PPXXXXPX---PXXPXXXXXPXXX 634
P PP P P P P PP P P P P
Sbjct: 1027 PSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVP 1086
Query: 635 XPXXPXXXXXPXXXXPXXPXXXPXXXPXPXXXXXPXXPXXXXXXXXPPXXXXPXXXPXPX 814
P P P P P P P P P P P
Sbjct: 1087 APSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPS 1146
Query: 815 PPXXPXPPXXXXPP 856
P P PP
Sbjct: 1147 VAAPPVPAPSGAPP 1160
>SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 557
Score = 28.3 bits (60), Expect = 1.5
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
Frame = +1
Query: 208 DYNPNG-NGYEPIDNGAYYVDRPQG---RPYFKPTPFPG 312
DYN N N Y PI N Y+++ G PYF PG
Sbjct: 119 DYNNNRKNFYPPIQNSTYFINATGGIDSMPYFGLNNAPG 157
>SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase
Wis4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1401
Score = 26.6 bits (56), Expect = 4.6
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = +3
Query: 234 RTYRQRCILRGPSPRPTLLQAYPFPWCSRWEVKNIL 341
R + ++C R P RP + PW + + K I+
Sbjct: 1280 RDFIEQCFERDPEQRPRAVDLLTHPWITDFRKKTII 1315
>SPAC29B12.10c |||OPT oligopeptide transporter
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 851
Score = 26.2 bits (55), Expect = 6.0
Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Frame = +2
Query: 128 LCWLWPTLKETATNLLTTARTSL-ILPKTTTLMETATNLSTTVHITWTV 271
LCW+WP K N L + L ILP T + N + W +
Sbjct: 361 LCWIWP--KNRVVNQLFGYNSGLGILPLTFDWQQVVYNSNPLASPWWVI 407
>SPBC776.14 |plh1||phospholipid-diacylglycerol acyltransferase
Plh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 623
Score = 25.8 bits (54), Expect = 8.0
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 205 KDYNPNGNGYEPIDNGAYYVDRPQGRP 285
K Y +G G +P + G YY + P+G+P
Sbjct: 479 KIYCVHGVG-KPTERGYYYTNNPEGQP 504
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,123,350
Number of Sequences: 5004
Number of extensions: 43184
Number of successful extensions: 247
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 208
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 432473040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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