Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_B01
         (859 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X52966-1|CAA37138.1|  110|Homo sapiens protein ( Human mRNA for ...    77   1e-13
BC061890-1|AAH61890.1|  110|Homo sapiens ribosomal protein L35a ...    77   1e-13
BC017093-1|AAH17093.1|  110|Homo sapiens RPL35A protein protein.       77   1e-13
BC010949-1|AAH10949.1|  110|Homo sapiens ribosomal protein L35a ...    77   1e-13
BC001037-1|AAH01037.1|  110|Homo sapiens ribosomal protein L35a ...    77   1e-13
AY871273-1|AAX11429.1|  110|Homo sapiens cell growth-inhibiting ...    77   1e-13
AL365223-3|CAI15713.1|   96|Homo sapiens ribosomal protein L35a ...    64   6e-10
X94619-1|CAA64325.1|   21|Homo sapiens ribosomal protein L35a pr...    32   2.3  

>X52966-1|CAA37138.1|  110|Homo sapiens protein ( Human mRNA for
           ribosomal protein L35a. ).
          Length = 110

 Score = 76.6 bits (180), Expect = 1e-13
 Identities = 34/60 (56%), Positives = 41/60 (68%)
 Frame = +3

Query: 222 GRLYAKAVFTGXKRGLRXQHENTALLKVEGAXXRNDAVFYAGXXCVYVYXAKXXXPIPGG 401
           GRL++KA+F G KRGLR Q E+TALLK+EG   R++  FY G  C YVY AK     PGG
Sbjct: 3   GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPGG 62



 Score = 72.5 bits (170), Expect = 2e-12
 Identities = 35/51 (68%), Positives = 36/51 (70%)
 Frame = +1

Query: 403 PVGKKTKLRAIWGXVXRPHGXSGXVRAKFXSNLPAXAMGXXIRVMLYPSRI 555
           P GK  K R IWG V R HG SG V AKF SNLPA A+G  IRVMLYPSRI
Sbjct: 60  PGGKPNKTRVIWGKVTRAHGNSGMVLAKFRSNLPAKAIGHRIRVMLYPSRI 110


>BC061890-1|AAH61890.1|  110|Homo sapiens ribosomal protein L35a
           protein.
          Length = 110

 Score = 76.6 bits (180), Expect = 1e-13
 Identities = 34/60 (56%), Positives = 41/60 (68%)
 Frame = +3

Query: 222 GRLYAKAVFTGXKRGLRXQHENTALLKVEGAXXRNDAVFYAGXXCVYVYXAKXXXPIPGG 401
           GRL++KA+F G KRGLR Q E+TALLK+EG   R++  FY G  C YVY AK     PGG
Sbjct: 3   GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPGG 62



 Score = 75.4 bits (177), Expect = 3e-13
 Identities = 36/51 (70%), Positives = 37/51 (72%)
 Frame = +1

Query: 403 PVGKKTKLRAIWGXVXRPHGXSGXVRAKFXSNLPAXAMGXXIRVMLYPSRI 555
           P GK  K R IWG V R HG SG VRAKF SNLPA A+G  IRVMLYPSRI
Sbjct: 60  PGGKPNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110


>BC017093-1|AAH17093.1|  110|Homo sapiens RPL35A protein protein.
          Length = 110

 Score = 76.6 bits (180), Expect = 1e-13
 Identities = 34/60 (56%), Positives = 41/60 (68%)
 Frame = +3

Query: 222 GRLYAKAVFTGXKRGLRXQHENTALLKVEGAXXRNDAVFYAGXXCVYVYXAKXXXPIPGG 401
           GRL++KA+F G KRGLR Q E+TALLK+EG   R++  FY G  C YVY AK     PGG
Sbjct: 3   GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPGG 62



 Score = 75.4 bits (177), Expect = 3e-13
 Identities = 36/51 (70%), Positives = 37/51 (72%)
 Frame = +1

Query: 403 PVGKKTKLRAIWGXVXRPHGXSGXVRAKFXSNLPAXAMGXXIRVMLYPSRI 555
           P GK  K R IWG V R HG SG VRAKF SNLPA A+G  IRVMLYPSRI
Sbjct: 60  PGGKPNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110


>BC010949-1|AAH10949.1|  110|Homo sapiens ribosomal protein L35a
           protein.
          Length = 110

 Score = 76.6 bits (180), Expect = 1e-13
 Identities = 34/60 (56%), Positives = 41/60 (68%)
 Frame = +3

Query: 222 GRLYAKAVFTGXKRGLRXQHENTALLKVEGAXXRNDAVFYAGXXCVYVYXAKXXXPIPGG 401
           GRL++KA+F G KRGLR Q E+TALLK+EG   R++  FY G  C YVY AK     PGG
Sbjct: 3   GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPGG 62



 Score = 75.4 bits (177), Expect = 3e-13
 Identities = 36/51 (70%), Positives = 37/51 (72%)
 Frame = +1

Query: 403 PVGKKTKLRAIWGXVXRPHGXSGXVRAKFXSNLPAXAMGXXIRVMLYPSRI 555
           P GK  K R IWG V R HG SG VRAKF SNLPA A+G  IRVMLYPSRI
Sbjct: 60  PGGKPNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110


>BC001037-1|AAH01037.1|  110|Homo sapiens ribosomal protein L35a
           protein.
          Length = 110

 Score = 76.6 bits (180), Expect = 1e-13
 Identities = 34/60 (56%), Positives = 41/60 (68%)
 Frame = +3

Query: 222 GRLYAKAVFTGXKRGLRXQHENTALLKVEGAXXRNDAVFYAGXXCVYVYXAKXXXPIPGG 401
           GRL++KA+F G KRGLR Q E+TALLK+EG   R++  FY G  C YVY AK     PGG
Sbjct: 3   GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPGG 62



 Score = 75.4 bits (177), Expect = 3e-13
 Identities = 36/51 (70%), Positives = 37/51 (72%)
 Frame = +1

Query: 403 PVGKKTKLRAIWGXVXRPHGXSGXVRAKFXSNLPAXAMGXXIRVMLYPSRI 555
           P GK  K R IWG V R HG SG VRAKF SNLPA A+G  IRVMLYPSRI
Sbjct: 60  PGGKPNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110


>AY871273-1|AAX11429.1|  110|Homo sapiens cell growth-inhibiting
           protein 33 protein.
          Length = 110

 Score = 76.6 bits (180), Expect = 1e-13
 Identities = 34/60 (56%), Positives = 41/60 (68%)
 Frame = +3

Query: 222 GRLYAKAVFTGXKRGLRXQHENTALLKVEGAXXRNDAVFYAGXXCVYVYXAKXXXPIPGG 401
           GRL++KA+F G KRGLR Q E+TALLK+EG   R++  FY G  C YVY AK     PGG
Sbjct: 3   GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPGG 62



 Score = 75.4 bits (177), Expect = 3e-13
 Identities = 36/51 (70%), Positives = 37/51 (72%)
 Frame = +1

Query: 403 PVGKKTKLRAIWGXVXRPHGXSGXVRAKFXSNLPAXAMGXXIRVMLYPSRI 555
           P GK  K R IWG V R HG SG VRAKF SNLPA A+G  IRVMLYPSRI
Sbjct: 60  PGGKPNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110


>AL365223-3|CAI15713.1|   96|Homo sapiens ribosomal protein L35a
           pseudogene 3 protein.
          Length = 96

 Score = 64.1 bits (149), Expect = 6e-10
 Identities = 29/59 (49%), Positives = 38/59 (64%)
 Frame = +3

Query: 222 GRLYAKAVFTGXKRGLRXQHENTALLKVEGAXXRNDAVFYAGXXCVYVYXAKXXXPIPG 398
           GRL++K+ F G KR L+ Q E+TALLK+EG   +++  FY G  C  VY AK    IPG
Sbjct: 2   GRLWSKSFFAGYKRSLQNQREHTALLKIEGGYAQDETEFYLGKRCACVYKAKSNTMIPG 60



 Score = 46.4 bits (105), Expect = 1e-04
 Identities = 22/38 (57%), Positives = 23/38 (60%)
 Frame = +1

Query: 400 VPVGKKTKLRAIWGXVXRPHGXSGXVRAKFXSNLPAXA 513
           +P  K  K R IWG V R H  SG V AKF SNLPA A
Sbjct: 58  IPGSKPNKSRVIWGKVTRAHRNSGMVAAKFHSNLPAKA 95


>X94619-1|CAA64325.1|   21|Homo sapiens ribosomal protein L35a
           protein.
          Length = 21

 Score = 32.3 bits (70), Expect = 2.3
 Identities = 13/19 (68%), Positives = 16/19 (84%)
 Frame = +3

Query: 222 GRLYAKAVFTGXKRGLRXQ 278
           GRL++KA+F G KRGLR Q
Sbjct: 3   GRLWSKAIFAGYKRGLRNQ 21


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,759,223
Number of Sequences: 237096
Number of extensions: 850004
Number of successful extensions: 1249
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1249
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10928473528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)