Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_A10
         (890 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1571 + 34504087-34504421,34505002-34505731,34506091-345120...    29   6.6  
11_05_0070 + 18818127-18818404,18818492-18818532,18818691-188189...    28   8.7  

>04_04_1571 + 34504087-34504421,34505002-34505731,34506091-34512077,
            34512493-34513964,34514114-34514377,34514761-34514978,
            34515759-34516030,34516190-34516559,34516578-34516797,
            34516819-34518931,34518941-34519193,34519269-34519401,
            34520597-34521114,34521207-34522115,34522195-34522368,
            34522833-34522882,34523963-34524035,34524413-34524477,
            34524736-34525522,34525622-34525878,34525989-34526109,
            34526315-34526956
          Length = 5320

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 19/62 (30%), Positives = 31/62 (50%)
 Frame = +1

Query: 175  QDLEEXLYNSILTGDYDSAVRQSLEYESXGXGSIIQNVVNNLIIDKRRNXMEYCYKLWVG 354
            Q LE    N I+T   D  +RQ L        S++ N++ +  +D  +  +E C  +WVG
Sbjct: 1147 QLLELGKNNEIVT---DQVLRQELALVMPKIYSLLSNLIGSDEMDIVKVVLEGCRWIWVG 1203

Query: 355  NG 360
            +G
Sbjct: 1204 DG 1205


>11_05_0070 +
           18818127-18818404,18818492-18818532,18818691-18818990,
           18820005-18820757,18820840-18820889
          Length = 473

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
 Frame = +2

Query: 449 LALKLGSTTNPSNERIAYGDGVDXHTELVSWKFITLWENNXVYFKIHNXKYNQYLKMXTT 628
           L +K G+     N  I+YGD V  +   V  + + + + N   +   + KY   L+   T
Sbjct: 289 LLVKRGNKAGHMNV-ISYGDEVGIYEVKVDNELVPMQQGNHEVYTWRDFKYKVVLQPNNT 347

Query: 629 -TCNCQ 643
            +C+CQ
Sbjct: 348 PSCDCQ 353


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,149,156
Number of Sequences: 37544
Number of extensions: 348145
Number of successful extensions: 774
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 774
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)