Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_A07
(931 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 35 0.019
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 35 0.019
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.057
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 1.2
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 28 1.6
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 27 5.0
SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr 1|... 26 8.7
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 8.7
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 26 8.7
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 34.7 bits (76), Expect = 0.019
Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 5/45 (11%)
Frame = +3
Query: 810 PAXPXAXXPPXXPXPSXPPXPL---PPPXLP--XXXXPSXLPPPL 929
P P + PP P+ PP P+ PPP P PS PPPL
Sbjct: 1691 PVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPL 1735
Score = 29.5 bits (63), Expect = 0.71
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = +3
Query: 810 PAXPXAXXPPXX--PXPSXPPXPLPPPXLPXXXXPSXLPPP 926
P P + PP P P+ PP PPP LP PS +P P
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSA-PPPPLPASSAPS-VPNP 1746
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/37 (37%), Positives = 15/37 (40%), Gaps = 2/37 (5%)
Frame = +3
Query: 819 PXAXXPPXX--PXPSXPPXPLPPPXLPXXXXPSXLPP 923
P PP P PS PP P PP P P+ P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 27.5 bits (58), Expect = 2.8
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +2
Query: 809 ARPPXRXXXPXXPPTLXSPXXPPPTXPXXXPXXFPXSPXPP 931
A PP PP + P PPP+ P P P +P PP
Sbjct: 1697 AAPPQMSAPTPPPPPMSVP--PPPSAP-PMPAGPPSAPPPP 1734
Score = 27.1 bits (57), Expect = 3.8
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 630 PPXPSSPPTXXXPRSXPP 683
PP PS+PP P S PP
Sbjct: 1715 PPPPSAPPMPAGPPSAPP 1732
Score = 26.6 bits (56), Expect = 5.0
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +2
Query: 815 PPXRXXXPXXPPTLXSPXXPPPTXPXXXPXXFPXSPXPP 931
PP R PP + +P PPP P P P P
Sbjct: 1690 PPVRPQSAA-PPQMSAPTPPPPPMSVPPPPSAPPMPAGP 1727
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 34.7 bits (76), Expect = 0.019
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = +3
Query: 810 PAXPXAXXPPXXPXPSXPPXPLPPPXLPXXXXPSXLPPP 926
PA PP P PP P PPP + P PPP
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 29.5 bits (63), Expect = 0.71
Identities = 13/32 (40%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = +3
Query: 834 PPXXPXPSXPPXPLP-PPXLPXXXXPSXLPPP 926
PP P+ P P+P PP P P PPP
Sbjct: 736 PPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 33.1 bits (72), Expect = 0.057
Identities = 17/39 (43%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = +3
Query: 810 PAXPXAXXPPXXPXPSX-PPXPLPPPXLPXXXXPSXLPP 923
PA P A PP S PP PLP P PS PP
Sbjct: 1004 PAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPP 1042
Score = 33.1 bits (72), Expect = 0.057
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +3
Query: 819 PXAXXPPXXPXPSXPPXPLPPPXLPXXXXPSXLPP 923
P A PP P PP P P +P PS PP
Sbjct: 1184 PAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPP 1218
Score = 32.3 bits (70), Expect = 0.10
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +3
Query: 819 PXAXXPPXXPXPSXPPXPLPPPXLPXXXXPSXLPPPL 929
P PP P + PP P P LP P+ PP+
Sbjct: 1203 PSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPV 1239
Score = 29.9 bits (64), Expect = 0.53
Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Frame = +3
Query: 810 PAXPXAXXPPXXPXPSX-PPXPLPPPXLPXXXXPSXLPPPL 929
P+ P P P PS PP P P P PS PP+
Sbjct: 1074 PSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPV 1114
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Frame = +3
Query: 810 PAXPXAXXPPXXPXPSX--PPXPLPPPXLPXXXXPSXLPP 923
P P P P PS PP P P +P PS PP
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPP 1122
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = +3
Query: 810 PAXPXAXXPPXXPXPSXPPXPLPPPXLPXXXXPSXLPP 923
P A P P PP P P +P PS PP
Sbjct: 1162 PKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPP 1199
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +3
Query: 810 PAXPXAXXPPXXPXPSXPPXPLPPP-XLPXXXXPSXLPPPL 929
P P + PP P PS P+PPP P PS PP+
Sbjct: 1190 PVPPPSEAPPV-PKPSVGVPPVPPPSTAPPVPTPSAGLPPV 1229
Score = 27.9 bits (59), Expect = 2.2
Identities = 14/41 (34%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Frame = +3
Query: 810 PAXPXAXXPPXXPXPSXPPXPLP-PPXLPXXXXPSXLPPPL 929
P P P P PS P+P P P PS PP+
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPV 1152
Score = 27.9 bits (59), Expect = 2.2
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Frame = +3
Query: 810 PAXPXAXXPPXXPXPSX--PPXPLPPPXLPXXXXPSXLPPPL 929
P P P P PS PP P P +P P+ PP+
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPV 1191
Score = 27.5 bits (58), Expect = 2.8
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +3
Query: 819 PXAXXPPXXPXPSXPPXPLPPPXLPXXXXPSXLPP 923
P PP PP P P P PS PP
Sbjct: 1107 PSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPP 1141
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/39 (35%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Frame = +3
Query: 810 PAXPXAXXPPXXPXPSX-PPXPLPPPXLPXXXXPSXLPP 923
P + P P PS PP P P P PS PP
Sbjct: 1122 PVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPP 1160
Score = 26.6 bits (56), Expect = 5.0
Identities = 13/39 (33%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Frame = +3
Query: 810 PAXPXAXXPPXX-PXPSXPPXPLPPPXLPXXXXPSXLPP 923
P P + PP P PP P+P P PS P
Sbjct: 1209 PVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAP 1247
Score = 26.2 bits (55), Expect = 6.6
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +3
Query: 810 PAXPXAXXPPXXPXPSXPPXPLPPPXLPXXXXPSXLPPPL 929
PA P P PP P PP P PS PP+
Sbjct: 1172 PAPSSGIPPVPKPAAGVPPVP-PPSEAPPVPKPSVGVPPV 1210
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 28.7 bits (61), Expect = 1.2
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 852 PSXPPXPLPPPXLPXXXXPSXLPPP 926
P PP P PPP P PPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 26.6 bits (56), Expect = 5.0
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +3
Query: 825 AXXPPXXPXPSXPPXPLPPPXLPXXXXP 908
A PP P P PP PP P P
Sbjct: 2 ASLPPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +2
Query: 815 PPXRXXXPXXPPTLXSPXXPPPTXP 889
PP P PP P PPP P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 855 SXPPXPLPPPXLPXXXXPSXLPPP 926
S PP PPP P P PPP
Sbjct: 3 SLPPGNPPPPPPPPGFEPPSQPPP 26
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +3
Query: 819 PXAXXPPXXPXPSXPPXPLPPPXLP 893
P PP P P P PPP P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +3
Query: 819 PXAXXPPXXPXPSXPPXPLPP 881
P PP PS PP P PP
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPP 30
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +3
Query: 819 PXAXXPPXXPXPSXPPXPLPPPXLPXXXXPSXLPPP 926
P PP P P PP PS LPPP
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPP 174
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 26.6 bits (56), Expect = 5.0
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = +3
Query: 810 PAXPXAXXPPXXPXPSXPPXPLPPPXLPXXXXPSXLPPPL 929
P+ P + PP P + P P+ P P + + PPL
Sbjct: 421 PSLPPSA-PPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPL 459
>SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1372
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 846 PXPSXPPXPLPPPXLPXXXXPSXL 917
P + PP PLPPP P S L
Sbjct: 802 PFKAPPPAPLPPPAPPLPTAMSSL 825
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.8 bits (54), Expect = 8.7
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = +3
Query: 810 PAXPXAXXPPXX-PXPSXPPXPLPPPXLPXXXXPSXLPPP 926
P P P P P+ PP P PP P S LP P
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPP-PPTLPPQSTNTSQLPMP 259
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +3
Query: 837 PXXPXPSXPPXPLPPPXLPXXXXPSXLPPPL 929
P PS PP LPPP S P P+
Sbjct: 633 PRPATPSNPPRSLPPPSGQVNAPMSQTPNPI 663
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,933,799
Number of Sequences: 5004
Number of extensions: 25360
Number of successful extensions: 216
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 176
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 471335896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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