Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_A04
(880 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008 33 0.23
03_06_0471 + 34169562-34169892,34170121-34170347 31 0.92
07_01_0725 - 5532803-5533324,5533631-5533657,5534285-5534398,553... 31 1.2
01_01_0046 - 331758-332627 31 1.6
01_06_0368 + 28792168-28792372,28792654-28792853,28793218-287936... 30 2.1
06_03_0874 - 25580417-25580419,25580504-25580604,25580828-255814... 30 2.8
12_01_0173 - 1292164-1293036,1294063-1294098,1294195-1294334,129... 27 3.3
02_05_0686 - 30900748-30902167,30903442-30904742 29 3.7
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 29 6.5
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 29 6.5
04_03_0925 - 20856628-20856690,20856786-20856845,20856924-208570... 29 6.5
02_04_0382 - 22501041-22501279,22501717-22501810 29 6.5
01_05_0490 + 22672241-22674679 23 7.1
12_01_0526 - 4171313-4171417,4171514-4171597,4171688-4171758,417... 28 8.6
03_02_0390 + 8056006-8057502 28 8.6
01_06_1529 - 38016208-38017296 28 8.6
01_01_1162 - 9253034-9254229,9254387-9254456,9254473-9254567,925... 28 8.6
>01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008
Length = 580
Score = 33.5 bits (73), Expect = 0.23
Identities = 23/63 (36%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Frame = +3
Query: 219 QPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEPI---DNGAYYVDRPQGRPYFKPTPFPG 389
QP Y P + P V PP Y P +G P N + Y + P GRP P P G
Sbjct: 387 QPEEAMSYAPPQSYPPNVRPPSPYMPPPSGPAPPFYGQNQSMY-EPPVGRPNSGPPPSYG 445
Query: 390 ARG 398
A G
Sbjct: 446 AGG 448
>03_06_0471 + 34169562-34169892,34170121-34170347
Length = 185
Score = 31.5 bits (68), Expect = 0.92
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = +3
Query: 240 YEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRPQGRPYFKPTPFPG 389
Y P P PP Y P+ GY P GAY +P + P +PG
Sbjct: 56 YPPAGGYPGAQYPPSGYPPSQGGYPP---GAYPPSGYPQQPGYPPAGYPG 102
>07_01_0725 -
5532803-5533324,5533631-5533657,5534285-5534398,
5534564-5534731,5535951-5536193,5537178-5537261,
5537357-5538117,5539637-5539730,5540633-5540899,
5541311-5541316,5542538-5542657
Length = 801
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = -3
Query: 872 GRGXRXXXXNXSTRLGGXEXRXXAAEGXGGXGXGGG 765
G G R R GG + R G GG G GGG
Sbjct: 732 GGGGRNRRSGGGARFGGRDFRRDRGSGGGGYGGGGG 767
>01_01_0046 - 331758-332627
Length = 289
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1
Query: 766 PPPXPXPPXPSAAXXRXSXPP 828
PPP P PP PS++ R PP
Sbjct: 23 PPPPPPPPPPSSSRYRPPSPP 43
>01_06_0368 +
28792168-28792372,28792654-28792853,28793218-28793675,
28793796-28793847
Length = 304
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
Frame = +1
Query: 751 ALXXSPPPXPXPPXPSAAXXR---XSXPPRRVLXXSXXXRXPRP 873
A +PP P PP P+AA R + PPR L S P P
Sbjct: 2 AFAVAPPVAPPPPSPAAAWGRRRARATPPRFALAASTRDGDPAP 45
>06_03_0874 -
25580417-25580419,25580504-25580604,25580828-25581411,
25581523-25581594,25581667-25581793,25583412-25583516,
25583643-25583676
Length = 341
Score = 29.9 bits (64), Expect = 2.8
Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Frame = +3
Query: 201 PDPFFAQPTVGNGYEPI-DNRPYIVNPPKDY---NPNGNGYEPIDNGAYYVDRPQGRPYF 368
P P+ QP G Y P Y P ++ P Y P G Y +PQG+PY
Sbjct: 229 PQPYPPQPQ-GQTYPPQPQGETYQPQPQRETYPPQPQVQPYPPKPQGQPYPPQPQGQPY- 286
Query: 369 KPTPF 383
P P+
Sbjct: 287 PPQPY 291
>12_01_0173 -
1292164-1293036,1294063-1294098,1294195-1294334,
1295592-1295748,1295862-1296035,1296146-1296396,
1299446-1299590
Length = 591
Score = 26.6 bits (56), Expect(2) = 3.3
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1
Query: 763 SPPPXPXPPXPSAAXXRXSXPP 828
+PPP P P SA R S PP
Sbjct: 515 APPPPPLPNIMSAGFPRLSVPP 536
Score = 21.4 bits (43), Expect(2) = 3.3
Identities = 9/23 (39%), Positives = 10/23 (43%)
Frame = +1
Query: 721 PRXQAVXVLGALXXSPPPXPXPP 789
P QA G+ PPP P P
Sbjct: 471 PPTQANQAAGSFPPPPPPLPLMP 493
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 724 RXQAVXVLGALXXSPPPXPXPPXPSAAXXRXSXPPR 831
R Q++ +PPP P PP P+AA PP+
Sbjct: 299 RPQSIAAAAVASPAPPPPP-PPKPAAAAPPPPPPPK 333
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 766 PPPXPXPPXPSAAXXRXSXPP 828
PPP P PP PS S PP
Sbjct: 545 PPPPPPPPPPSGNKPAFSPPP 565
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 766 PPPXPXPPXPSAAXXRXSXPP 828
PPP P PP PS + + PP
Sbjct: 1180 PPPPPPPPLPSGPPPQPAPPP 1200
>04_03_0925 -
20856628-20856690,20856786-20856845,20856924-20857001,
20857127-20857192,20857542-20858675,20858991-20860283
Length = 897
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +1
Query: 766 PPPXPXPPXPSAAXXRXSXPPRRVLXXSXXXRXPRP 873
PPP PP P+ A S PP + P+P
Sbjct: 7 PPPPEHPPTPAPAPAPASPPPHPAASGNEAAAPPKP 42
>02_04_0382 - 22501041-22501279,22501717-22501810
Length = 110
Score = 28.7 bits (61), Expect = 6.5
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Frame = +3
Query: 216 AQPTVGNGYEPIDNRPYIVNPPK----DYNPNGNGYEPIDNGAYYVDRPQGRPYFKPTPF 383
A+ T +G P ++ + PP D P+ + Y+P + YY D P Y+ P P
Sbjct: 28 AEQTHDDGDNPPESPDHEDPPPSPEYYDPPPSPDYYDPPHSPDYY-DPPPSPDYYDPPPS 86
Query: 384 PGARGG 401
P GG
Sbjct: 87 PYYGGG 92
>01_05_0490 + 22672241-22674679
Length = 812
Score = 23.4 bits (48), Expect(2) = 7.1
Identities = 10/26 (38%), Positives = 11/26 (42%)
Frame = +1
Query: 718 HPRXQAVXVLGALXXSPPPXPXPPXP 795
+PR V L PP P PP P
Sbjct: 677 YPRRAVVYYTYPLPPPSPPLPPPPPP 702
Score = 23.4 bits (48), Expect(2) = 7.1
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = +1
Query: 769 PPXPXPPXPSAAXXRXSXPP 828
PP P PP P + PP
Sbjct: 697 PPPPPPPPPPMSEGEEEAPP 716
>12_01_0526 -
4171313-4171417,4171514-4171597,4171688-4171758,
4171814-4171891,4174482-4174569,4174659-4174850,
4174939-4175802
Length = 493
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 766 PPPXPXPPXPSAAXXRXSXPP 828
PPP P PP P AA PP
Sbjct: 159 PPPPPPPPAPVAAAVSAPAPP 179
>03_02_0390 + 8056006-8057502
Length = 498
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/67 (23%), Positives = 28/67 (41%)
Frame = +3
Query: 171 ENADSVVINDPDPFFAQPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRP 350
++ D V + F A+PT N + + Y+ + +GNG + G + +
Sbjct: 289 DDGDEVNAKEQFEFVAEPTTANSKDCVGTHEYLAPELVSGSGHGNGVDWWAFGVFLYELV 348
Query: 351 QGRPYFK 371
GR FK
Sbjct: 349 YGRTPFK 355
>01_06_1529 - 38016208-38017296
Length = 362
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -3
Query: 797 EGXGGXGXGGGEXXRAPNTQTACXRG 720
EG GG G GGGE R AC G
Sbjct: 56 EGRGGGGGGGGEGRRRQAYTYACASG 81
>01_01_1162 -
9253034-9254229,9254387-9254456,9254473-9254567,
9255344-9255487,9255514-9255622
Length = 537
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1
Query: 766 PPPXPXPPXPSAAXXRXSXPPRR 834
PPP P P SAA + PPRR
Sbjct: 209 PPPPPRCPGGSAADRHMTQPPRR 231
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,294,892
Number of Sequences: 37544
Number of extensions: 369750
Number of successful extensions: 2522
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2281
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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