Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_A04
(880 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF002198-10|AAF99937.1| 471|Caenorhabditis elegans Hypothetical... 32 0.47
Z81103-7|CAB03211.3| 579|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z81103-5|CAD56592.2| 550|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z81088-12|CAD56587.2| 579|Caenorhabditis elegans Hypothetical p... 30 2.5
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 4.4
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 29 5.8
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 29 5.8
U21319-7|AAL16307.1| 469|Caenorhabditis elegans Hypothetical pr... 29 5.8
U00063-5|AAK18963.1| 182|Caenorhabditis elegans Hypothetical pr... 29 5.8
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 29 5.8
>AF002198-10|AAF99937.1| 471|Caenorhabditis elegans Hypothetical
protein F35F10.12 protein.
Length = 471
Score = 32.3 bits (70), Expect = 0.47
Identities = 26/70 (37%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Frame = +3
Query: 198 DPDPFFAQPT-VGNGYEPIDNRPYIVNPPKDYN--PNGNGYEPIDNGAYYVDRPQGRPYF 368
DP+ +QPT +G G P P V PP Y P +G DNGA P G PY
Sbjct: 345 DPNLPPSQPTPIGGGVAPAGVAPAGVVPPPGYGFLPMTDG---TDNGAGDTPYPVGPPYP 401
Query: 369 KPTPFPGARG 398
P P G
Sbjct: 402 SDVPAPYPSG 411
>Z81103-7|CAB03211.3| 579|Caenorhabditis elegans Hypothetical
protein M04G12.4a protein.
Length = 579
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +3
Query: 177 ADSVVINDPDPFFAQPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEP 317
+ SV+ P QP VGN Y+P P +PP Y GY P
Sbjct: 80 SQSVLFEQPQ---IQPLVGNSYDP----PVRFDPPYAYRATATGYMP 119
>Z81103-5|CAD56592.2| 550|Caenorhabditis elegans Hypothetical
protein M04G12.4b protein.
Length = 550
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +3
Query: 177 ADSVVINDPDPFFAQPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEP 317
+ SV+ P QP VGN Y+P P +PP Y GY P
Sbjct: 51 SQSVLFEQPQ---IQPLVGNSYDP----PVRFDPPYAYRATATGYMP 90
>Z81088-12|CAD56587.2| 579|Caenorhabditis elegans Hypothetical
protein M04G12.4a protein.
Length = 579
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +3
Query: 177 ADSVVINDPDPFFAQPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEP 317
+ SV+ P QP VGN Y+P P +PP Y GY P
Sbjct: 80 SQSVLFEQPQ---IQPLVGNSYDP----PVRFDPPYAYRATATGYMP 119
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 766 PPPXPXPPXPSAAXXRXSXPP 828
PPP P PP P A S PP
Sbjct: 513 PPPPPPPPPPPALEQEISGPP 533
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +1
Query: 748 GALXXSPPPXPXPPXPSAAXXRXSXPP 828
GA +PPP P PP S + + PP
Sbjct: 149 GATSSAPPPPPPPPPVSVPSSKPTPPP 175
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +1
Query: 748 GALXXSPPPXPXPPXPSAAXXRXSXPP 828
GA +PPP P PP S + + PP
Sbjct: 149 GATSSAPPPPPPPPPVSVPSSKPTPPP 175
>U21319-7|AAL16307.1| 469|Caenorhabditis elegans Hypothetical
protein C30G12.1 protein.
Length = 469
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +1
Query: 286 TTTLMETATNLSTTVHITWTVPKADLTSSLPLSLVLAVGSXKKKK 420
TTT M T T ST + T T P+ ++P S + K K
Sbjct: 294 TTTTMTTTTRTSTAIPTTTTTPRQISLQTIPFSTTTRQPNFDKTK 338
>U00063-5|AAK18963.1| 182|Caenorhabditis elegans Hypothetical
protein F56C9.8 protein.
Length = 182
Score = 28.7 bits (61), Expect = 5.8
Identities = 19/85 (22%), Positives = 31/85 (36%), Gaps = 2/85 (2%)
Frame = +3
Query: 105 FFMIFVLALLAMANAQDPVRVVENADSVVINDPDPFFA--QPTVGNGYEPIDNRPYIVNP 278
F + A++ + D R+ +S N P + QP Y P + Y N
Sbjct: 37 FIYVIYAAVVRSMRSDDKQRLHSGRNSAQWNQPQQQYREQQPASDFPYNPAPTQNYDYNA 96
Query: 279 PKDYNPNGNGYEPIDNGAYYVDRPQ 353
P N + P+ + Y +PQ
Sbjct: 97 PIRTPVNPTSFTPVPSVTQYSTQPQ 121
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = -3
Query: 872 GRGXRXXXXNXSTRLGGXEXRXXAAEGXGGXGXGGG 765
GRG R R GG + R G GG G GGG
Sbjct: 572 GRGGR----GNGQRFGGRDHRYQGGSGNGGGGNGGG 603
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,579,250
Number of Sequences: 27780
Number of extensions: 281107
Number of successful extensions: 1195
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1152
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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