Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_P24
         (891 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-116|AAF52115.2|  559|Drosophila melanogaster CG12586-PA...    31   2.1  
AY061421-1|AAL28969.1|  300|Drosophila melanogaster LD35248p pro...    29   8.6  
AF182826-1|AAF01031.1|  300|Drosophila melanogaster cyclophilin-...    29   8.6  
AE013599-2502|AAF57839.1|  300|Drosophila melanogaster CG4886-PA...    29   8.6  

>AE014297-116|AAF52115.2|  559|Drosophila melanogaster CG12586-PA
           protein.
          Length = 559

 Score = 31.1 bits (67), Expect = 2.1
 Identities = 27/95 (28%), Positives = 36/95 (37%)
 Frame = +1

Query: 160 ITKKNTPSEAYFQSDTPVTSRGTRKWEEGRSSALWDRTTMDSSVKPVTTERFSMMTAVN* 339
           IT  +T +       TP T+  T   +  R+S     TT  ++  P TT   +  T    
Sbjct: 179 ITTSSTTTTPTTTKTTPTTTTPTTTTQTTRTSTTTTPTTTTATTTPTTTTTKTTTTPT-- 236

Query: 340 PARLTAPGS*DPEVTALTTVDVWTGPTRTHKPPLT 444
               T P S  P  T  TT    TG + T  P  T
Sbjct: 237 ----TTPTS-TPTTTTTTTTTQTTGTSTTTTPTTT 266


>AY061421-1|AAL28969.1|  300|Drosophila melanogaster LD35248p
           protein.
          Length = 300

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = +3

Query: 270 NDDGLFGKAGYNREIFNDDRGQLTGQAYGTRVLGPGGDSTN 392
           N++G  GK+ Y ++ FND+   L   ++GT  +   G +TN
Sbjct: 204 NNNGTGGKSIYGKK-FNDENFNLKHNSFGTLSMANSGANTN 243


>AF182826-1|AAF01031.1|  300|Drosophila melanogaster cyclophilin-33
           protein.
          Length = 300

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = +3

Query: 270 NDDGLFGKAGYNREIFNDDRGQLTGQAYGTRVLGPGGDSTN 392
           N++G  GK+ Y ++ FND+   L   ++GT  +   G +TN
Sbjct: 204 NNNGTGGKSIYGKK-FNDENFNLKHNSFGTLSMANSGANTN 243


>AE013599-2502|AAF57839.1|  300|Drosophila melanogaster CG4886-PA
           protein.
          Length = 300

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = +3

Query: 270 NDDGLFGKAGYNREIFNDDRGQLTGQAYGTRVLGPGGDSTN 392
           N++G  GK+ Y ++ FND+   L   ++GT  +   G +TN
Sbjct: 204 NNNGTGGKSIYGKK-FNDENFNLKHNSFGTLSMANSGANTN 243


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,983,123
Number of Sequences: 53049
Number of extensions: 681040
Number of successful extensions: 1440
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1376
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1440
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4352837424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)