Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_P17
         (928 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0034 - 12663290-12663355,12663437-12663566,12663903-126639...    83   2e-16
02_02_0299 - 8726024-8726101,8726460-8726534,8726836-8726965,872...    75   8e-14
06_03_0297 + 19267491-19267677,19267799-19267843,19268466-192685...    72   6e-13
02_02_0206 - 7771835-7771913,7772083-7772219,7772364-7772422,777...    56   5e-08
10_08_0980 - 22002818-22003008,22003646-22003750,22003859-220039...    29   5.2  
01_01_0598 + 4443768-4443949,4444053-4444150,4444275-4444308,444...    29   6.9  
05_07_0014 - 27046329-27046371,27059170-27060017,27060739-27061563     28   9.2  

>07_03_0034 -
           12663290-12663355,12663437-12663566,12663903-12663990,
           12664106-12664178,12666144-12666248,12667610-12667732,
           12667821-12667897,12668877-12669006
          Length = 263

 Score = 83.4 bits (197), Expect = 2e-16
 Identities = 37/77 (48%), Positives = 50/77 (64%)
 Frame = +1

Query: 229 WFTESCDMWPGGTFSFXVKEVLHTXKSKYQNIQVFDTTSLGKVLVLDGIIQCTXKDXXSY 408
           WF+E   MWPG   S  V++VL   KS YQN+ VF +++ GKVLVLDG+IQ T +D  +Y
Sbjct: 34  WFSEISPMWPGEAHSLKVEKVLFQGKSDYQNVMVFQSSTYGKVLVLDGVIQVTERDECAY 93

Query: 409 HEXISXXPLCCHQKSRK 459
            E I+  PLC  +  +K
Sbjct: 94  QEMITHLPLCSIKDPKK 110


>02_02_0299 -
           8726024-8726101,8726460-8726534,8726836-8726965,
           8727406-8727601,8727894-8727965,8728087-8728159,
           8728240-8728344,8728502-8728624,8728730-8728806,
           8729064-8729108,8729214-8729433
          Length = 397

 Score = 74.9 bits (176), Expect = 8e-14
 Identities = 33/70 (47%), Positives = 46/70 (65%)
 Frame = +1

Query: 250 MWPGGTFSFXVKEVLHTXKSKYQNIQVFDTTSLGKVLVLDGIIQCTXKDXXSYHEXISXX 429
           MWPG   S  V+++L+  KS YQ + VF++++ GKVLVLDGI+Q T KD  +Y E I+  
Sbjct: 86  MWPGEAHSLKVEKILYQGKSPYQEVLVFESSTYGKVLVLDGIVQLTDKDECAYQEMITHL 145

Query: 430 PLCCHQKSRK 459
           PLC     +K
Sbjct: 146 PLCSIPSPKK 155


>06_03_0297 +
           19267491-19267677,19267799-19267843,19268466-19268542,
           19268652-19268774,19269029-19269133,19269217-19269289,
           19269588-19269690,19269890-19270144,19270996-19271125,
           19271278-19271352,19271470-19271550
          Length = 417

 Score = 72.1 bits (169), Expect = 6e-13
 Identities = 31/63 (49%), Positives = 42/63 (66%)
 Frame = +1

Query: 250 MWPGGTFSFXVKEVLHTXKSKYQNIQVFDTTSLGKVLVLDGIIQCTXKDXXSYHEXISXX 429
           MWPG   S  V+ +L+  KS YQ I VF++++ G VLVLDGI+Q T KD  +Y E ++  
Sbjct: 75  MWPGEAHSLKVENILYQGKSPYQEILVFESSTYGNVLVLDGIVQLTEKDECAYQEMVTHL 134

Query: 430 PLC 438
           PLC
Sbjct: 135 PLC 137


>02_02_0206 -
           7771835-7771913,7772083-7772219,7772364-7772422,
           7772535-7772610,7772717-7772873,7773241-7773329,
           7773648-7773750,7773919-7774013,7774301-7774367,
           7774894-7775066
          Length = 344

 Score = 55.6 bits (128), Expect = 5e-08
 Identities = 28/82 (34%), Positives = 41/82 (50%)
 Frame = +1

Query: 199 KKKMDKLKTNWFTESCDMWPGGTFSFXVKEVLHTXKSKYQNIQVFDTTSLGKVLVLDGII 378
           K++  + ++ W+ E  D        + +  VLH   SKYQ I + DT   GK L++DG +
Sbjct: 31  KQQQREEESKWYEEEID--DDLKLCYALNSVLHRGASKYQEIALIDTKHFGKALIIDGKM 88

Query: 379 QCTXKDXXSYHEXISXXPLCCH 444
           Q T  D   YHE +   PL  H
Sbjct: 89  QSTEVDEFIYHESLIHPPLLFH 110


>10_08_0980 -
           22002818-22003008,22003646-22003750,22003859-22003987,
           22004076-22004268,22004270-22004473,22004931-22005071,
           22005325-22005486,22005664-22005666
          Length = 375

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +1

Query: 283 KEVLHTXKSKYQNIQVFDTTSLGKVLVLDGII 378
           K+ LH   S Y+N +V D +S G  +V+DG++
Sbjct: 300 KKHLHGAFSTYKNYEVLDVSSNGGDVVVDGMV 331


>01_01_0598 +
           4443768-4443949,4444053-4444150,4444275-4444308,
           4444629-4444780,4444871-4445051,4445707-4445887,
           4446034-4446142,4446324-4446451,4446758-4446832
          Length = 379

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = -2

Query: 126 LQSHVQIMYSLLEI*KLVSPFLRTQTLHQI 37
           LQ  ++I  SLL++   VSP++ T  LH+I
Sbjct: 343 LQGLIEIPKSLLQVRGCVSPYMPTNVLHRI 372


>05_07_0014 - 27046329-27046371,27059170-27060017,27060739-27061563
          Length = 571

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 17/54 (31%), Positives = 21/54 (38%), Gaps = 1/54 (1%)
 Frame = +3

Query: 537 SWSTXXTXXLSHQKGTSXSXXARXPXXPKSXPS-CXVTXX*XXXPNPXXPSLTP 695
           SW +      SH    S    AR P  P+S  S    +      P+P  PS TP
Sbjct: 173 SWDSGRLCHASHLSSHSSRGSARTPSGPRSPSSRAPYSPVYSPYPHPVSPSYTP 226


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,967,654
Number of Sequences: 37544
Number of extensions: 304170
Number of successful extensions: 402
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 392
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 402
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2647531240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)